##gff-version	3
##query	GI11250%20[Drosophila%20mojavensis] 1 136
scaffold_4421	Scipio	protein_match	5349	5652	1.0	-	0	gene_id=kassiopeia_gene_id330849 GI11250 [Drosophila mojavensis];Query=GI11250%20[Drosophila%20mojavensis] 1 101
scaffold_4421	Scipio	protein_match	5178	5254	1.0	-	2	gene_id=kassiopeia_gene_id330849 GI11250 [Drosophila mojavensis];Query=GI11250%20[Drosophila%20mojavensis] 102 127
scaffold_4421	Scipio	protein_match	5084	5160	1.0	-	2	gene_id=kassiopeia_gene_id330849 GI11250 [Drosophila mojavensis];Query=GI11250%20[Drosophila%20mojavensis] 102 127
scaffold_4421	Scipio	protein_match	4963	5066	1.0	-	2	gene_id=kassiopeia_gene_id330849 GI11250 [Drosophila mojavensis];Query=GI11250%20[Drosophila%20mojavensis] 102 136
# protein sequence = [MLIRGVAEPMAVLCADSVFHDALAEWAFWERNQSIWCARKMSRTVKTMIAQYIEGYQSSWDELLHDVALAVNSSVAGS
# KGDEGNGAAYGVEDQAGARASAERAATADQSKDLMGGLRERPPKIKAIKLEKDGEKVN]
#
##gff-version	3
##query	GI10921%20[Drosophila%20mojavensis] 1 525
scaffold_6308	Scipio	protein_match	2795520	2795556	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 1 12
scaffold_6308	Scipio	protein_match	2794819	2794958	1.0	-	2	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 13 59
scaffold_6308	Scipio	protein_match	2786554	2786601	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 60 75
scaffold_6308	Scipio	protein_match	2780373	2780417	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 60 74
scaffold_6308	Scipio	protein_match	2777409	2777453	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 60 74
scaffold_6308	Scipio	protein_match	2771382	2771426	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 60 74
scaffold_6308	Scipio	protein_match	2767872	2767981	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 75 111
scaffold_6308	Scipio	protein_match	2764491	2764671	1.0	-	1	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 112 171
scaffold_6308	Scipio	protein_match	2735172	2735247	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 172 196
scaffold_6308	Scipio	protein_match	2734622	2734816	1.0	-	2	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 197 261
scaffold_6308	Scipio	protein_match	2731484	2731570	1.0	-	2	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 262 290
scaffold_6308	Scipio	protein_match	2722887	2722996	1.0	-	2	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 291 327
scaffold_6308	Scipio	protein_match	2719738	2719892	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 328 379
scaffold_6308	Scipio	protein_match	2719427	2719543	1.0	-	1	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 380 418
scaffold_6308	Scipio	protein_match	2716923	2717094	1.0	-	1	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 419 475
scaffold_6308	Scipio	protein_match	2716713	2716856	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 476 523
scaffold_6308	Scipio	protein_match	2716639	2716644	1.0	-	0	gene_id=kassiopeia_gene_id330533 GI10921 [Drosophila mojavensis];Query=GI10921%20[Drosophila%20mojavensis] 524 525
# protein sequence = [MPFISCRSNISWACSAGPHEKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWND
# MNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQL
# QDEAGGDISSFITNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLN
# MVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNPDTHEMSEWIRVIFLYWLPCILRMQRPGQVGYECPPPPSSSGSSTAGDKKQQIQ
# NVELKERSSKSLLANVLDIDDDFRCNHRCTSATLPHQPTYYRTMFRQGDDGSVGPVGPVGPVGPVAPVPDSRMHEAISHTCLSSSAEYELALILKELR
# WITDQLKKEDETGDITRDWKFAAMVVDRLCLIIFTLFTIIATLAVLFSAPHFIFP]
#
##gff-version	3
##query	GI11078%20[Drosophila%20mojavensis] 1 964
scaffold_6308	Scipio	protein_match	225898	227022	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 1 375
scaffold_6308	Scipio	protein_match	268858	268994	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 376 421
scaffold_6308	Scipio	protein_match	271021	271240	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 422 494
scaffold_6308	Scipio	protein_match	272306	272401	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 495 526
scaffold_6308	Scipio	protein_match	280496	280812	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 527 632
scaffold_6308	Scipio	protein_match	281418	281522	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 633 667
scaffold_6308	Scipio	protein_match	288615	288750	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 668 712
scaffold_6308	Scipio	protein_match	291033	291168	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 668 712
scaffold_6308	Scipio	protein_match	292908	293018	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 713 749
scaffold_6308	Scipio	protein_match	293802	293929	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 750 792
scaffold_6308	Scipio	protein_match	296500	296569	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 793 815
scaffold_6308	Scipio	protein_match	296662	296763	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 816 849
scaffold_6308	Scipio	protein_match	296860	297041	1.0	+	0	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 850 910
scaffold_6308	Scipio	protein_match	298354	298516	1.0	+	1	gene_id=kassiopeia_gene_id330683 GI11078 [Drosophila mojavensis];Query=GI11078%20[Drosophila%20mojavensis] 911 964
# protein sequence = [MSIQKLNDNTNSGYVSSEETDSLLVSNATKGGGRTALLRQVKSSSANGPTTNNMASTSGGKPTLMRQDRTSTYLTSPQ
# QSQQLRMGSEESMRGGCIGHLEDIEQGLGRQAPCTTNVPDIEVHEEDQELTQNTSTTTTISATTSVAGTSQQTKQQQQQQPIEQQQQQQQKPTISIMN
# LGSGTGSSHPNLGTSSYQNLSSSIPPSAPSRCRACRNCSRRASTTPISTGAQIDRSASRDSVKSAYQPINLSSSMAICISNSTLQQQQQQQQQQQQQQ
# QQQQQLLLHQQQLQLHHYQQPQVPPVLITSSPTNGSRIIRQSSQPESSSTAICCGTHSSCGHSHTVPNVSLKQLRESTQDGIAGIAADSLRINGGMRP
# FKQLRKPASTLSIPGSMKTPSIANREQISSGCNEEAAEALVGIHSDYPRYMEERALTGGNTSRKPSTNSAKHKPNVGYRLGKRKALFEKRKRISDYAL
# VMGMFGIIVMVIENELSSAGVYTKASFYSTALKTLISVSTVILLGLIVAYHALEVQLFMIDNCADDWRIAMTWQRISQIGLELFICAIHPIPGEYYFQ
# WTTKLANKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFTDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCE
# RFHDEEHANLLNTMWLTAITFLCVGYGDIVPNTYCGRGITLTCGMVGAGCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKTLKNAAANVLRETWLI
# YKHTRLVKRVNPGRVRTHQRKFLLAIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIISEMSSRQDAIEERLTNLEDKMQSLQEHMESLPDLLSRC
# LTQHQERIEQRRNFLHPDTAAAAIQPSIQPPTPQSMFNAAPMLFPHSRSVPSSNNAAATYHWPTSPILPPISSRTPHLVPDTHMPSNGSAVNSYASSN
# KYGS]
#
##gff-version	3
##query	GI11167%20[Drosophila%20mojavensis] 1 66
scaffold_6308	Scipio	protein_match	1824768	1824809	1.0	+	0	gene_id=kassiopeia_gene_id330770 GI11167 [Drosophila mojavensis];Query=GI11167%20[Drosophila%20mojavensis] 1 14
scaffold_6308	Scipio	protein_match	1825220	1825318	1.0	+	0	gene_id=kassiopeia_gene_id330770 GI11167 [Drosophila mojavensis];Query=GI11167%20[Drosophila%20mojavensis] 15 47
scaffold_6308	Scipio	protein_match	1825322	1825477	1.0	+	0	gene_id=kassiopeia_gene_id330770 GI11167 [Drosophila mojavensis];Query=GI11167%20[Drosophila%20mojavensis] 15 66
# protein sequence = [MKPYKVMSRPLIYHCYYYYCYYCYYYCYYYYYYYYYCFCYCYCYCYCYCYCYYYYYCFCYCYYYYC]
#
##gff-version	3
##query	GI16177%20[Drosophila%20mojavensis] 1 2884
scaffold_6328	Scipio	protein_match	1736074	1736163	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1 30
scaffold_6328	Scipio	protein_match	1734600	1734734	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 31 75
scaffold_6328	Scipio	protein_match	1732725	1732956	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 76 152
scaffold_6328	Scipio	protein_match	1732488	1732662	1.0	-	2	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 153 211
scaffold_6328	Scipio	protein_match	1723676	1723797	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 212 251
scaffold_6328	Scipio	protein_match	1723280	1723434	1.0	-	2	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 252 303
scaffold_6328	Scipio	protein_match	1721845	1721937	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 304 334
scaffold_6328	Scipio	protein_match	1719382	1719623	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 335 415
scaffold_6328	Scipio	protein_match	1715688	1716282	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 416 613
scaffold_6328	Scipio	protein_match	1714742	1714765	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 614 621
scaffold_6328	Scipio	protein_match	1712858	1713163	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 622 723
scaffold_6328	Scipio	protein_match	1711820	1712793	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 724 1048
scaffold_6328	Scipio	protein_match	1711556	1711765	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1049 1118
scaffold_6328	Scipio	protein_match	1707099	1707213	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1119 1156
scaffold_6328	Scipio	protein_match	1704771	1704936	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1119 1173
scaffold_6328	Scipio	protein_match	1701534	1701689	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1157 1208
scaffold_6328	Scipio	protein_match	1700700	1700882	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1209 1269
scaffold_6328	Scipio	protein_match	1700244	1700426	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1270 1330
scaffold_6328	Scipio	protein_match	1699983	1700144	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1331 1384
scaffold_6328	Scipio	protein_match	1698945	1699115	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1385 1441
scaffold_6328	Scipio	protein_match	1697680	1698815	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1442 1820
scaffold_6328	Scipio	protein_match	1696529	1696721	1.0	-	1	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1821 1884
scaffold_6328	Scipio	protein_match	1695849	1695998	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1885 1934
scaffold_6328	Scipio	protein_match	1690943	1693792	1.0	-	0	gene_id=kassiopeia_gene_id335659 GI16177 [Drosophila mojavensis];Query=GI16177%20[Drosophila%20mojavensis] 1935 2884
# protein sequence = [MDANANVFMVVSFGYINSHLALKQTSDSDGLTICVTCTWFERISILVILLNCITLGMYQPCVDDTCLKPRCKILQIFD
# DIIFAFFALEMTIKMVAMGMCGKNTYLADSWNRLDFFIVLAGLLEYVMHVENLNLTAIRTIRVLRPLRAINRIPSMRILVMLLLDTLPMLGNVLLLCF
# FVFFIFGIIGVQLWEGILRQRCTLERPEGMIYPITLSQYYEFSKDQDYICSTPEDSGMHLCGNFPPYRIGSLVCTEEAKLLDLNEPTNTSCVNWNQYY
# TTCKQSGENPFQGTISFDNIGMAWVAIFLVISLEGWTDIMYYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTS
# TSTLASSTNNSEPATCYAEIVKYIAHLWRRFKRRMLKKYRLYKYQRQQRREGLLPNADNLTFSPSRIKCHHPNCPKYSNRKPSSMQDQMITVMVPLNS
# NNNNNNNNNSSNNNSSSNNGSGNGGAGGASAAAGGAGSNSQNHTTVALINGINGSTASVSMAQQQQLVAGGAASQAQLSSSDNTEQSLGEGSGSGVAR
# RTSSMKKPTAHHGHGLQLKPDSTGGEQKTILLKLPQQVMDSDQLILQLGNLGKSHPCTSGFLSPPTSASRRPSVMFNEYVLLHTPPALSNEPAAAAAA
# TTTTTAIATTATAAAAAATTTAAAAITTATTSIGSNSGGNIHSMEKMTQAGDGSIWQVNLPQSIGTIANPYAECSELGIHDAMTCQELLAFSVAFSAA
# LPTGQSTLESFYSSLARCDPHTVEALNKVQQQKRLTATAATTAAAAAATAATPTATTAATTATAAPATVAAAADILDSSADLPAPGLSLELAAVSAAV
# PMENRRKERPHLPHNNNNNNNHNNNNNNSKSNHSRNTGGGQRHHGRSHAPTGNYMEDYACCYDLYQNALSPLDERQHPRSPALRLLIAVYRCLMRVCS
# WIRRYIKRLVEHKYFQQGILLAILINTLSMGIEYHNQPEELTAIVETSNVVFSGIFAVEMLLKVIAEGPFRYIANGFNVFDGIIVILSAIEICQTFAG
# NGTGGGGSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMNLFGCKFCEKINGEKICDRKNFDSLLWALVTVFQ
# ILTQEDWNVVLFNGMEKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRELVKKLREETLAENYSDGMYDESRSEADSSTTNDSY
# YEVRNRWRSAEDVRKQLQESAELNIEAKNNIHRQRLLQPIQDYQINELPAQGASSASLGNAGDKEGDAKPRGGLKKTYSIKERRNEAPRLSKMRLIRD
# PPLITTTAATPQDSPSTTMEPGMSFRQWGDMEPVPPSPSLLKPPNIFSGGQRVLDEGIPAIDLIPPSPVLAHKPLNILNASQLQGHAGTLSSLLPSAL
# ASSMHSVIIDDISKNSSTSAAATPIYVPTISSVASTLQPPTESHSHSLNLSELSLSSAVGGAGGSVGSTSSSSERLPLAPPSSFKQRFRRSSSKKRPS
# PHPQRPDDQHLADEEEPQLNNGSGDNSYLLRSSPVPAMGMAAGGTGPKDTNRLSPQNSIRRLSNTLSIGSGPGSRRASACIFNSQVYQNLNQPPKLRA
# GAGQRRMSSIELAFSKTSHLNLHNLEANRKSLSYTNSKIDLDKWQKSYMTLNEPDMLQQYMEARDKRKNSISHYNLKKRLEEKELQQLQQLHQQQLQQ
# QQQQQQQPQQLESQLPPQQLAKELQLLSMQRHSMVPCGSSGEHVSKLKMVIQRLTPKHFTAERESYSMYIFPEDNRFRQICTWFVNQKWFDNVVLLFI
# ALNCITLAMERPNIPPNSTERVFLATANYVFTVVFTVEMFIKVVATGMFYGPDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRIFGILRVFRLLR
# SLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQLFKGTFFYCEGENIKNVRNADECRRIPGNVWTNRKYNFDDLGKALMSLFV
# LSSRDGWVNIMYTGLDAVGVDQQPIVNYNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKEEKIRRAAKRALQMEKKRRRMHEPPYYTNY
# SPTRMFVHNVVTSKYFDLAIAAVIGLNVVTMAMEYYKMPIPLQYALKIFNYFFTAVFILEANMKLVALGWRLYLKDRWNQLDVGIVLLSIVGIVLEEL
# ETNIIPINPTIIRVMRVLRIARVLKLLKMAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLT
# LFRVATGDNWNGIMKDTLRDNCDDAADCVRNCCVSSFIAPIFFVIFVLMAQFVLVNVVVAVLMKHLEESHKQMEDELDMEVELERELVREQEFAQEQK
# LCQQLAEAQAKLPAPPRPLAKVKSLPKNFIYSTPSLDKKFPSVSLTGSTANNIAAGAGQRRQTVQYFNQQQQQQHLQQQQQHQQQLQQQHPHQQQQRQ
# QHHLSLAEMGSALTPQSLSARLGEPFGGAMTAAGSGPGSELLGLQLPPLGRRGRRASAAAGFRKRGVLSKERSLDEQAIRRRNLEAKRTSCDSLPWGG
# DALDYRRGTIFESLESDPASSYDLDVRSIRSADVPRPRDDDESLEPLAVVSALVQPTATPSSPPITTATPTPTPTPSPTPTSTSMPQPQPQSQSQPQQ
# QHPRRPFGWSQSVDQGCLLGPGGRSSLLLSVPRSMPPRSRSGSTKQLFKQQALDEDADMDENSLLLPATHLAATVAPSSEHPTATATAAAAAAAAAAS
# DVDGDSDAVDVSSAAGLSKSDSADIMRIISERRRMDQRDQCGNEDSDYNELLLVKSPQSSTD]
#
##gff-version	3
##query	GI16210%20[Drosophila%20mojavensis] 1 328
scaffold_6328	Scipio	protein_match	1152713	1152785	1.0	-	0	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 1 24
scaffold_6328	Scipio	protein_match	1073116	1073163	1.0	-	2	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 25 40
scaffold_6328	Scipio	protein_match	1069091	1069138	1.0	-	2	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 25 40
scaffold_6328	Scipio	protein_match	1065074	1065210	1.0	-	2	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 41 86
scaffold_6328	Scipio	protein_match	1064708	1064899	1.0	-	0	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 87 150
scaffold_6328	Scipio	protein_match	1064440	1064602	1.0	-	0	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 151 204
scaffold_6328	Scipio	protein_match	1061247	1061401	1.0	-	2	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 205 256
scaffold_6328	Scipio	protein_match	1060509	1060640	1.0	-	0	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 257 300
scaffold_6328	Scipio	protein_match	1060109	1060192	1.0	-	0	gene_id=kassiopeia_gene_id335691 GI16210 [Drosophila mojavensis];Query=GI16210%20[Drosophila%20mojavensis] 301 328
# protein sequence = [MGLTRKLFCLLLISMMLLLLPGVLEVLSSWEEWWTYDGISGPSFWGLINPQWSMCNKGHRQSPIDVVPDKLLFDPYLR
# PLHIDKHKVSGTLHNTGQSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENSRGSEHYIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVG
# LSLMVQIGETPNPELRIITSTFNKVLYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTVWILVNKPIYITKQELYQLRRLMQGSESTPKAP
# LGNNARPVQSLHHRTVRTNIDFKRHKNQNACPSMYKDMYYRANRWSPDTGLLIR]
#
##gff-version	3
##query	GI16359%20[Drosophila%20mojavensis] 1 200
scaffold_6328	Scipio	protein_match	1431950	1432006	1.0	+	0	gene_id=kassiopeia_gene_id335837 GI16359 [Drosophila mojavensis];Query=GI16359%20[Drosophila%20mojavensis] 1 19
scaffold_6328	Scipio	protein_match	1435654	1435710	1.0	+	0	gene_id=kassiopeia_gene_id335837 GI16359 [Drosophila mojavensis];Query=GI16359%20[Drosophila%20mojavensis] 1 19
scaffold_6328	Scipio	protein_match	1442448	1442829	1.0	+	0	gene_id=kassiopeia_gene_id335837 GI16359 [Drosophila mojavensis];Query=GI16359%20[Drosophila%20mojavensis] 20 146
scaffold_6328	Scipio	protein_match	1443313	1443473	1.0	+	2	gene_id=kassiopeia_gene_id335837 GI16359 [Drosophila mojavensis];Query=GI16359%20[Drosophila%20mojavensis] 147 200
# protein sequence = [MELECDLGAIQSEELLRKMWQQSEDSERKRQIRSHLYKLRESRLRNLYRHEPDNLTFAMSEPNGNTLSGYAGKDPLAT
# SHGDALLDQNFQSLKSKEVRDSMSPTHELKFHSMSLTQPNSTGWDVQTSSEVSPDGRAYRTETLAKTDVGHPRLLTSMCLTLCVTPTLFVCMSLCRDQ
# PKNLTQTTNSNSNSNSNHHDPLMR]
#
##gff-version	3
##query	GI16361%2C%20partial%20[Drosophila%20mojavensis] 1 289
scaffold_6328	Scipio	protein_match	1466183	1466353	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 1 57
scaffold_6328	Scipio	protein_match	1466412	1466487	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 58 82
scaffold_6328	Scipio	protein_match	1468693	1468768	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 58 82
scaffold_6328	Scipio	protein_match	1469851	1469929	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 58 83
scaffold_6328	Scipio	protein_match	1470073	1470151	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 58 83
scaffold_6328	Scipio	protein_match	1472212	1472304	1.0	+	2	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 83 113
scaffold_6328	Scipio	protein_match	1474905	1474997	1.0	+	2	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 83 113
scaffold_6328	Scipio	protein_match	1475077	1475182	1.0	+	2	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 114 149
scaffold_6328	Scipio	protein_match	1476051	1476198	1.0	+	1	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 150 198
scaffold_6328	Scipio	protein_match	1477044	1477195	1.0	+	0	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 199 249
scaffold_6328	Scipio	protein_match	1477285	1477405	1.0	+	1	gene_id=kassiopeia_gene_id335839 GI16361, partial [Drosophila mojavensis];Query=GI16361%2C%20partial%20[Drosophila%20mojavensis] 250 289
# protein sequence = [VKTTQQQRSSSSSNNNNNNISSSSSNTRKTTTTSSAPVTRTTCDIEAIWDEQLLRQLLEQASTYEERRKIRARLRELM
# AEREAQHKQQSSTTSERTETKSKDGGAIVTTTTTKVTTRTVSGSAANNKNISPLAKFKQLDKAAQQQQAQKSSPTTSTPTTPGGSAQPYFKFTDPALN
# ARAATVKDQLLQWCQHKTQEYENVQISNFSSSWSDGLAFCALIHHFLPDAFDYSQLTKQTRKHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCV
# FVYVQSIYRRFRNCQ]
#
##gff-version	3
##query	GI16411%20[Drosophila%20mojavensis] 1 1094
scaffold_6328	Scipio	protein_match	2669635	2669814	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 1 60
scaffold_6328	Scipio	protein_match	2669898	2669957	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 61 80
scaffold_6328	Scipio	protein_match	2678270	2678416	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 81 129
scaffold_6328	Scipio	protein_match	2678557	2678636	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 130 156
scaffold_6328	Scipio	protein_match	2679053	2679132	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 130 156
scaffold_6328	Scipio	protein_match	2682028	2682264	1.0	+	1	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 157 235
scaffold_6328	Scipio	protein_match	2682571	2682737	1.0	+	1	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 236 290
scaffold_6328	Scipio	protein_match	2682804	2683108	1.0	+	2	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 291 392
scaffold_6328	Scipio	protein_match	2683196	2683360	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 393 447
scaffold_6328	Scipio	protein_match	2683420	2683783	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 448 568
scaffold_6328	Scipio	protein_match	2684585	2685848	1.0	+	2	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 569 990
scaffold_6328	Scipio	protein_match	2685909	2686065	1.0	+	1	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 991 1042
scaffold_6328	Scipio	protein_match	2686520	2686609	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 1043 1072
scaffold_6328	Scipio	protein_match	2688208	2688273	1.0	+	0	gene_id=kassiopeia_gene_id335889 GI16411 [Drosophila mojavensis];Query=GI16411%20[Drosophila%20mojavensis] 1073 1094
# protein sequence = [MTKKYEFDWIIPVPPELTTGAVFDRWFENEKETKENDFERDALFKVDEYGFFLYWKSEGRDGDVIELCQVSDIRAGGT
# PKDPKILDKVTKKNGTNIQELDKRSLTICSNTDYINITYHHVICPDAATAKSWQKNLRLITHNNRATNVCPRTNLMKHWMRLSYCVEKSGKIPVKTLA
# KTFASGKTEKLVYTCIKDAGLPDDKNATMTKEQFTFDKFYALYHKVCPRNDIEELFTSITKGKQDFISLEQFIQFMNEKQRDPRMNEILYPLYEEKRC
# TEIINDYENDEEKKKNGQLSLDGFKRYLMSDENAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVEMYRQTLLAGCRCVELDCWNGKG
# EDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSEYPVILSFENHCNRAQQYKLAKYCDDFFGDLLLKEPLPDHPLEPGLPLPPPCKLKRKILIKNKR
# MKPEVEKVELELWLKGELKTDDDPEEDASAGKPPEAAAAPAPVPEAAAADAAAEGGGGAEAEAAAANYSGSTTNVHPWLSSMVNYAQPIKFQGFDKAI
# EKNIAHNMSSFAESAGMNYLKQSSIDFVNYNKRQMSRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQTSDLPMQLNQGKFEYNGGCGYLLKPDFMRR
# ADKDFDPFADAPVDGVIAAQCSVKVIAGQFLSDKKVGTYVEVDMFGLPSDTVKKEFRTRLVPNNGLNPVYNEDPFVFRKVVLPDLAVLRFGVYEESGK
# MIGQRILPLDGLQAGYRHVSLRTEANFPMSLPMLFVNIELKIYVPDGFEDFMAMLSDPRGFAGAAKQQNEQMKALGIEEQSGGAARDAGKAKEEEKKE
# PPLVFEPVTLESLRQEKGFQKVGKKQIKELDTLRKKHAKERTSVQKTQNAAIDKLIKGKSKDDIRNDATIKNAINDQTKQWTDMIARHRKEEWDMLRQ
# HVQDSQDAMKALMLTVQAAQIKQLEDRHARDIKELNAKQAKTSADTAKEVQNDKTLKTKNEKDRRLREKRQNNVKRFMEEKKQIGVKQGRAMEKLKLA
# HAKQVEEFSTDVQKLMDMYKIEEEAYKTQGKTEFYA]
#
##gff-version	3
##query	GI16449%20[Drosophila%20mojavensis] 1 1531
scaffold_6328	Scipio	protein_match	3421143	3421190	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1 16
scaffold_6328	Scipio	protein_match	3427533	3427583	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1 17
scaffold_6328	Scipio	protein_match	3445121	3446230	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 17 386
scaffold_6328	Scipio	protein_match	3448680	3449648	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 387 709
scaffold_6328	Scipio	protein_match	3449717	3449894	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 710 768
scaffold_6328	Scipio	protein_match	3449962	3450657	1.0	+	2	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 769 1000
scaffold_6328	Scipio	protein_match	3450725	3450930	1.0	+	2	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1001 1069
scaffold_6328	Scipio	protein_match	3451062	3451201	1.0	+	0	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1070 1116
scaffold_6328	Scipio	protein_match	3451263	3451424	1.0	+	1	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1117 1170
scaffold_6328	Scipio	protein_match	3451608	3451771	1.0	+	1	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1171 1224
scaffold_6328	Scipio	protein_match	3451831	3452750	1.0	+	2	gene_id=kassiopeia_gene_id335927 GI16449 [Drosophila mojavensis];Query=GI16449%20[Drosophila%20mojavensis] 1225 1531
# protein sequence = [MSAKNQINVFMEKFNTKLQACPIVCINEPDTQSTTTEILQTSPESTLEKPKATATVAANSSSSSNSSSTNINTNTTTT
# TNNNNSSCITINATPTTAVAATATATAAATAATAATTSSTAGVTKITITSDNSQSNSNNCSSSNIRSSSIVLNGYNSNSSSNSNNLRSSNIRSSSSNN
# NNNSLISITSLNSCSDLSQGSTATLKLSSNSNSNSNSNSSNCLNSSCSSRPNGGASDTSSANFQERFDFEHWKSILSDLSCFNSIYRYWQQYSSSSSS
# SSNSNGNSNGSGNSNVCVEHADESRSLGNGANSFYTHNILGYTFGYPFGLSKEHESDAHDNSSNSGAGNGSVAGFKKSHSSCETPLQKHYRQQQKKKM
# PVFRGKRVWCGCFKDDEPPEICVVEGEFTLQTLTPTQPMPSVDELDTKFAELVEELDLTAPNKEAMLSLPAQKKWQIYCSRKLPVDANDGPDAAAITQ
# PPTAEHYIERLKELVVHVSLSPEDSPSHELNTRMDNHAAFVDALKTALRTSTHSFVLRFVELDGLPALLNLLLQLDIRVANSSLHTSLIGCIKALMNN
# SMGRAHVLAHPTAIDTIARSLAADNIRTKISALEILGAVCLVPGGHRKVLQAMLHFQEFATERTRFQSIVNDLDRSTYAYRDNVNLKTALMSFVNAVL
# NYGPGQENLEFRLHLRYEFLMLGIQPVIDKLRTHENETLDRHLDFFEMVRAEDEKEFARRFNEEHVDTKSAGAMFELLRRKLSHSPAYPHMLSLLQHM
# LLLPYTGHCTEHWLLIDRVVQQIVLQVEQRPSSDLISDPDDPGKQLKLASESPVHDPDVAPLQIDVNKLVRLLVKEEQLTQARKRADELERENFEVQS
# RLAKKEQELDLRMQEKEDLETSLARMRERLEKESAQHSQAVQRAQTAEMKAEDLQHRLQSEQQERARLERLVTEGSIPDDQKVAGLTGCNGAVSPPPP
# PPPIKAVPPPPPPMAPAMLPPPPPPCPGAPPPPPSMTPTMAPAPPKVELPKKNVPQPANPLKSFNWSKLPDAKLQGTVWSELDESKLYNNMELESIDK
# LFSAYQKNGVSTTDGSYEDLRVSGKNKQKVLSVIDGRRAQNCTILLSKLKMSDMDISKAILSMDSNEQLALDMVEQLLKFTPSAEERALLDEHSEDIE
# SLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTVNDLIPRITSVMEASREVARSRRLRKLLELVLALGNYMNRGARGNASGFRLASLNRLADTKSSA
# AKGTTLLHYLVQVIEKKFKDLLKLEDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQGDRFLPVMREFHAQASVRFAELEDKFQ
# DMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAEARHDNESFRRRQEEEEKRAKQEAELKKRTIERKNKTGLMSSVARNLGLKSASNGSGSGSD
# SLTKSDNKGEFDDLISALRTGDVFGEDMAKFKRSRKARISNGSASGGGAAGGAAPASGQNSPPRLQREESGRERERTVRRQ]
#
##gff-version	3
##query	GI16477%20[Drosophila%20mojavensis] 1 1892
scaffold_6328	Scipio	protein_match	3868801	3868995	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 1 65
scaffold_6328	Scipio	protein_match	3876707	3876805	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 66 98
scaffold_6328	Scipio	protein_match	3877188	3877280	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 66 96
scaffold_6328	Scipio	protein_match	3889645	3890139	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 97 261
scaffold_6328	Scipio	protein_match	3890263	3890556	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 262 359
scaffold_6328	Scipio	protein_match	3891563	3891691	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 360 402
scaffold_6328	Scipio	protein_match	3891776	3896245	1.0	+	0	gene_id=kassiopeia_gene_id335955 GI16477 [Drosophila mojavensis];Query=GI16477%20[Drosophila%20mojavensis] 403 1892
# protein sequence = [MDTVAIKTAPPHAPLATTTAQQQQQQQLQQLQRQTANSPATIGDSVYNNNNSNGNSIGAFFQTCKVLWHLDAFRRSFR
# SLNQHVCGGQDCIFCALKFNSISFKQIASLSSDRIMIKFRYKRKEPSNVVACSASATATTVTAASAATSTTAATSPATAAAAVAPAVVQLQLISNNGT
# LPRSSPRKLLLDSGSATLTRQSKQQQQQQQQQQQQQQQQNLCALAKVSSSIELAFHGYNNNNNNNISNNNNNNSIERDRCINAVIELFQQLQTSSEPA
# LCPEPLRRALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHISPDDGDACESAACIAHRRFAMRVIEQSVCKCGANSEQLPFTQMVHYVSASALTSQ
# KSLAMQNHQQLSFGQLLRAAGNMGDIRDCPNSCGAKIGICRALLNRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLADVFHQVSEQRWAQQSQHE
# LVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQPPSSAAGAAVNSCGMERRAVTPSPEKPSLGSTRRAI
# TPTPLNDYQNLSVIQKSIFPAPLPASAALPALAAGSDETDAYISRKTVEHVLSAQYQNLSVIQDKIAADKEGGFLNRKPIEAMLSAQLARRQHLQLQR
# SHSAESSSGHASNGSSPPSDGLTIPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYLYMVAKRGVAAVPQSPTRHGHVHGLPYDAGYDSFSLSSTD
# SYPPKHVLNPQLAKIPETNAPNAAGHVPHGPAHGPGLALSGDCEKLCHEADQLLEKSRLVEESHDLETALVLCNAAAGRARAAMDAPYSNPHTMTFAR
# MKHNTCVMRARSLHRRILIEKGAESEAMPELKHMREGSNSSVKHMRQNSKDRTLEKLEKLEKLEQLPPTASAAKSIEIYATLPKRKSPLKALVNAGGD
# DNAIEYEPPASQAKPERESRSLFGRRDKDKDKEKEKEREKEKRSRSEDRNKLTREFSLTETLLVNAKDTLKKHKEDKDEKKEKDKSGKKQHKIRRKLL
# MGGLIRRKNRSMPDLTEAVDDPSSSAAAAAPAAASALSAHATPLGSVDDSAVGLHLHGHAYMGMSGYISEGHFDYPSSSNSTNSAASAAAAAAAASGC
# CANPNLERSKLMRKSFHGSGRQLTMVPKVAPPPPMRTSSALTQQQQQQQQQQQQQQQQQQQQQQQQQHFHHEANLSNISAMSSNASISEDSCQTIITT
# CAQVHSEQSPLKDLQLPCAPDMGMALPLPMPLPLPQLELPPYPSPPQSVCHSRQASEDFPPPPPEIDLEPLNQQLNHLHALEAASKQQRQQLDSMEGT
# TSILAQLQQRQHLLKLRKEQATPLPDLRSRKPEPTSAGAAAAAAAAGGSPSSVRDLAHRFEQTSIGGAAAGATAAAAAAMANSNMRSYASQELLSSVR
# TQMNGLPNGKPETDEVDCAPMPRQQQQQQQQQQQLLLAKPKYEMSQSQIAEEIREVELLNSMVQQTLNQSNLAAPKRVKKKSVSFCDQVILVATAGNE
# EDDDFIPNPILERVLRTAQHPNEKVSAQLIQQQQQNMLRLQTEAQPRLQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQLQASPMLGRPDMQRYVQRQQ
# QLLQQQQQQQELYRLQQQQQQQQQQQQQLLPRTSMSGLSNQQQQQQQQQLDMQYSSMPRPLHAQSYSMQMQKQQQQQLQQQQQQQQLQQQQQLSIAYF
# SNGNVAAEQSLPSPYQRVPHPHAYQQANFYAAQQQQQQQQQQQQQLLNGKKKVSFEPGTKGELDCLPSTPQAPPPPATSLQNGLPEPLSNGTNLNGIT
# AIPTRVYNNAIVKASAKAVECNLCRKRHVIAPSIYCTNCEYYLQMLNQRR]
#
##gff-version	3
##query	GI16488%20[Drosophila%20mojavensis] 1 375
scaffold_6328	Scipio	protein_match	4020137	4020236	1.0	+	0	gene_id=kassiopeia_gene_id335966 GI16488 [Drosophila mojavensis];Query=GI16488%20[Drosophila%20mojavensis] 1 33
scaffold_6328	Scipio	protein_match	4020349	4020448	1.0	+	0	gene_id=kassiopeia_gene_id335966 GI16488 [Drosophila mojavensis];Query=GI16488%20[Drosophila%20mojavensis] 1 33
scaffold_6328	Scipio	protein_match	4020515	4021350	1.0	+	2	gene_id=kassiopeia_gene_id335966 GI16488 [Drosophila mojavensis];Query=GI16488%20[Drosophila%20mojavensis] 34 312
scaffold_6328	Scipio	protein_match	4021438	4021578	1.0	+	0	gene_id=kassiopeia_gene_id335966 GI16488 [Drosophila mojavensis];Query=GI16488%20[Drosophila%20mojavensis] 313 359
scaffold_6328	Scipio	protein_match	4021728	4021775	1.0	+	0	gene_id=kassiopeia_gene_id335966 GI16488 [Drosophila mojavensis];Query=GI16488%20[Drosophila%20mojavensis] 360 375
# protein sequence = [MANISNNEYKKTDFDWNEISVGDYNLDHSQNFFALASTSNKENMGDQLNWNNEKMTREQQDRSVCDQNLNDDDIVKLN
# TSELLRENALQDKPVCDQNLNVEDIVKLRTIERLGEDGPEDKSACDPYLNEGNTSDGKAEQEEKEDQSASYQNLNEDYIVHIESELQLQLQLDLSTDS
# HQAEGDKVESLPIPKQAESISDQEMEVNEILGLKPRLKLNWTPKPKNQSEPVSAGKAPRVYECKDVYQMKREMIMRQREEEERKAREFHSKPVPNFKA
# LHKRLADTIVTHKITVPVTPETLKHSYEHLQRRKSREEEHDNARNLRRAGLAEVKPFQLRADQRVRERREYNNVVQCNLDEKKKQRLIVALAAAIQQM
# RRN]
#
##gff-version	3
##query	GI21488%20[Drosophila%20mojavensis] 1 2168
scaffold_6359	Scipio	protein_match	3338141	3338290	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1 50
scaffold_6359	Scipio	protein_match	3334637	3334669	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 51 61
scaffold_6359	Scipio	protein_match	3327902	3328057	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 62 113
scaffold_6359	Scipio	protein_match	3327560	3327765	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 114 182
scaffold_6359	Scipio	protein_match	3322931	3323059	1.0	-	1	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 183 225
scaffold_6359	Scipio	protein_match	3319975	3320066	1.0	-	1	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 226 255
scaffold_6359	Scipio	protein_match	3319550	3319826	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 256 348
scaffold_6359	Scipio	protein_match	3319149	3319458	1.0	-	1	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 349 451
scaffold_6359	Scipio	protein_match	3317642	3317950	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 452 554
scaffold_6359	Scipio	protein_match	3313734	3313796	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 555 575
scaffold_6359	Scipio	protein_match	3310736	3310916	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 576 635
scaffold_6359	Scipio	protein_match	3310440	3310651	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 636 706
scaffold_6359	Scipio	protein_match	3310280	3310379	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 707 739
scaffold_6359	Scipio	protein_match	3310127	3310195	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 740 762
scaffold_6359	Scipio	protein_match	3306303	3306580	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 763 855
scaffold_6359	Scipio	protein_match	3306059	3306232	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 856 913
scaffold_6359	Scipio	protein_match	3305636	3305798	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 914 967
scaffold_6359	Scipio	protein_match	3304411	3304573	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 914 967
scaffold_6359	Scipio	protein_match	3302568	3302755	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 968 1030
scaffold_6359	Scipio	protein_match	3302292	3302496	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1031 1098
scaffold_6359	Scipio	protein_match	3299476	3299687	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1099 1169
scaffold_6359	Scipio	protein_match	3297881	3298288	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1170 1305
scaffold_6359	Scipio	protein_match	3296512	3296685	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1306 1363
scaffold_6359	Scipio	protein_match	3295706	3295828	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1364 1404
scaffold_6359	Scipio	protein_match	3291049	3291171	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1405 1445
scaffold_6359	Scipio	protein_match	3288420	3288542	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1446 1486
scaffold_6359	Scipio	protein_match	3287141	3287335	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1487 1551
scaffold_6359	Scipio	protein_match	3286346	3286591	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1552 1633
scaffold_6359	Scipio	protein_match	3283575	3283845	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1634 1723
scaffold_6359	Scipio	protein_match	3278034	3278338	1.0	-	2	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1724 1825
scaffold_6359	Scipio	protein_match	3274891	3275919	1.0	-	0	gene_id=kassiopeia_gene_id340805 GI21488 [Drosophila mojavensis];Query=GI21488%20[Drosophila%20mojavensis] 1826 2168
# protein sequence = [MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPT
# LEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTP
# TVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV
# IILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNISNWYSEDDGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFD
# SFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANA
# QAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRR
# GSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGV
# STMTKESKLRNRNTRNQSVGASNGGTTCLDTNHKVEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVS
# VYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFA
# IEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQ
# LFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTN
# KIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKN
# NKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEDLDEEGECEEGPLDGDIIIHANDEDILDEYPADCCPDS
# YYKKFPILAGDEDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTN
# AWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNA
# LVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDLNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAID
# SREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTD
# KKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVV
# RVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINE
# EACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPP
# LQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARVESGGG
# GGGNDADGEGNAEGGGDADGSHDPADPGGADGHADAADHNGPHDNDDPDAGGANGGHDPADADGGGIVNSPNDGNANGSGSPGGQSAGSGGSAGRQTA
# VLVESDGFVTKNGHKVVIHSRSPSITSRTADV]
#
##gff-version	3
##query	GI21495%20[Drosophila%20mojavensis] 1 86
scaffold_6359	Scipio	protein_match	2922292	2922327	1.0	-	0	gene_id=kassiopeia_gene_id340812 GI21495 [Drosophila mojavensis];Query=GI21495%20[Drosophila%20mojavensis] 1 12
scaffold_6359	Scipio	protein_match	2921049	2921129	1.0	-	0	gene_id=kassiopeia_gene_id340812 GI21495 [Drosophila mojavensis];Query=GI21495%20[Drosophila%20mojavensis] 13 39
scaffold_6359	Scipio	protein_match	2920959	2921021	1.0	-	0	gene_id=kassiopeia_gene_id340812 GI21495 [Drosophila mojavensis];Query=GI21495%20[Drosophila%20mojavensis] 13 33
scaffold_6359	Scipio	protein_match	2920787	2920927	1.0	-	0	gene_id=kassiopeia_gene_id340812 GI21495 [Drosophila mojavensis];Query=GI21495%20[Drosophila%20mojavensis] 40 86
# protein sequence = [MLLCLYVWAIHLEPKELKELKELKELKELKDLEERKELKDLKELKELKDLEERKELKVLKELKILKKVKELTEVKELT
# ELKELKEL]
#
##gff-version	3
##query	GI21496%20[Drosophila%20mojavensis] 1 176
scaffold_6359	Scipio	protein_match	2916531	2916747	1.0	-	0	gene_id=kassiopeia_gene_id340813 GI21496 [Drosophila mojavensis];Query=GI21496%20[Drosophila%20mojavensis] 1 72
scaffold_6359	Scipio	protein_match	2902640	2902902	1.0	-	2	gene_id=kassiopeia_gene_id340813 GI21496 [Drosophila mojavensis];Query=GI21496%20[Drosophila%20mojavensis] 73 160
scaffold_6359	Scipio	protein_match	2877677	2877987	1.0	-	2	gene_id=kassiopeia_gene_id340813 GI21496 [Drosophila mojavensis];Query=GI21496%20[Drosophila%20mojavensis] 73 176
# protein sequence = [MGISIGISIGISMGISIGISIGISVSISIGISISISIGISISVSIRTSISITIRISITRTISISTSISISIRTLSLYL
# YLHFASTFNLYLCFYLYLYLYLYLYLYLYLYLYLYLHLYLYLYLYLYLCLYLCLCLYLSGLWRSALYGAALFALELALGSHFLAFAVLGFISCAVVHQ]
#
##gff-version	3
##query	GI21504%20[Drosophila%20mojavensis] 1 190
scaffold_6359	Scipio	protein_match	2757190	2757243	1.0	-	0	gene_id=kassiopeia_gene_id340821 GI21504 [Drosophila mojavensis];Query=GI21504%20[Drosophila%20mojavensis] 1 18
scaffold_6359	Scipio	protein_match	2755152	2755724	1.0	-	0	gene_id=kassiopeia_gene_id340821 GI21504 [Drosophila mojavensis];Query=GI21504%20[Drosophila%20mojavensis] 19 209
scaffold_6359	Scipio	protein_match	2748754	2749269	1.0	-	0	gene_id=kassiopeia_gene_id340821 GI21504 [Drosophila mojavensis];Query=GI21504%20[Drosophila%20mojavensis] 19 190
# protein sequence = [MLSGARIRNPSVTALPELYLAPAQSSYSAPAVSRSSYSAPAVSHSSYSAPAVSRSSYSAPAVSQVSYSAPAISRSSYS
# APAVSRSSYSSSASTYAPSRQYLAPAQGSYSAPAVSHVSYSAPAVSHSSYSSPARYASSFGQGLGGYTASSSASGRSFGQGYGGSRYGGGSSYGAGGT
# RYAANGGYAYRYKH]
#
##gff-version	3
##query	GI21543%20[Drosophila%20mojavensis] 1 605
scaffold_6359	Scipio	protein_match	2095325	2095591	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 1 89
scaffold_6359	Scipio	protein_match	2092687	2092808	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 90 130
scaffold_6359	Scipio	protein_match	2091845	2091966	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 90 130
scaffold_6359	Scipio	protein_match	2091413	2091499	1.0	-	1	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 131 159
scaffold_6359	Scipio	protein_match	2091159	2091343	1.0	-	1	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 160 220
scaffold_6359	Scipio	protein_match	2088941	2089005	1.0	-	2	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 221 242
scaffold_6359	Scipio	protein_match	2088659	2088837	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 243 302
scaffold_6359	Scipio	protein_match	2087971	2088145	1.0	-	1	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 303 360
scaffold_6359	Scipio	protein_match	2087739	2087900	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 361 414
scaffold_6359	Scipio	protein_match	2087482	2087673	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 415 478
scaffold_6359	Scipio	protein_match	2087238	2087415	1.0	-	0	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 479 537
scaffold_6359	Scipio	protein_match	2086958	2087160	1.0	-	2	gene_id=kassiopeia_gene_id340860 GI21543 [Drosophila mojavensis];Query=GI21543%20[Drosophila%20mojavensis] 538 605
# protein sequence = [MLRLADPILSDVRCLHSAAQDKQAQVSVADRTQHVQSKEEGVKPQRDPLDVSFNDPIAAFKSKTTWELARAYLVYMIC
# SSEKIVEHNMTLMKWTNKMLGKKIFTALMKATFYGHFVAGEDQIKIIPTLERLRSFGVKPILDYSVEEDISQEEAEKREVESSVSSAGDNEKDAGALP
# QYHVDKSFADRRYKVSSARTYFYLNEATCERNMEIFIKCLEAVSGATFGTGITAIKLTALGRPQLLLQLSEVIMRTRKYMEALVGGQGNVLTHHKTIK
# DLEKYYASVGDNKDVQQFLKNVTSDKEGILHLFPWSGIVDEDSQLSETFRVPDPLTGQMRRLISQISPKEEEMFRNMIRRLNTIVKTAAELDVRIMVD
# AEQTYFQPAITRITLEMMRKYNKDKAIVFNTYQCYLRETFREVVTDLEQASRQNFYFGAKLVRGAYMEQERARAQALGYADPVNPSYEATTEMYHKTL
# AECLRRIKVLKDCGQDARKIGIMVASHNEDTVRFAIENMKSIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVEEVLPYLSRRAQENK
# GVLKKIKKEKRLLLSEIRRRLFRGQLFYTPKGNYVPI]
#
##gff-version	3
##query	GI21655%20[Drosophila%20mojavensis] 1 645
scaffold_6359	Scipio	protein_match	731832	731895	1.0	+	0	gene_id=kassiopeia_gene_id340971 GI21655 [Drosophila mojavensis];Query=GI21655%20[Drosophila%20mojavensis] 1 21
scaffold_6359	Scipio	protein_match	732728	732791	1.0	+	0	gene_id=kassiopeia_gene_id340971 GI21655 [Drosophila mojavensis];Query=GI21655%20[Drosophila%20mojavensis] 1 21
scaffold_6359	Scipio	protein_match	733339	735209	1.0	+	2	gene_id=kassiopeia_gene_id340971 GI21655 [Drosophila mojavensis];Query=GI21655%20[Drosophila%20mojavensis] 22 645
# protein sequence = [MDFNVEAAVAAAAAAAAQRADGRKKKNQNEKPPYVFNKDPRYLPNLTKLTFGKRHIEMDGIVMCTLSPQEHRHDAEAA
# KKSEELRCPVFEIPAKLFPRNAPLHKIMYLPVELLPKGFEAGGIFSTGVLSRKLYPNGLLPSRYSGMTPPLFVGCRLPPGQTQPNAPTATSATLLDLA
# TPDNVVLPTNYLGPEMCLGYIISHTDLLDNVDRSVQRMRSDYTIYVPDLSIVPMMVYHSTPLCITVLSELIHPHVRSAADAALTERTPKVDLPARYFS
# NESSMVLSEPVHLPRRYLPPGFSAGCVFGSGSLSRSLFMELLKDAPPQFMRDNPVIPPIFIGQWKGKKTPKRYLFPREAYMMNIERPRLEEEVEVMGD
# ELPEASNRQNEQPASEQPAGEQPADDQPAGEQPAGEQPASEEAAGEEPAGEEAAGEEPDLEGAVGGEEPAGEETEYLKEEYLDGSELEDYEYEYEFEY
# DPELENYEFDEESALSPLEEETDEDNRSTTPFVNSEDGRETAPFKAPNNEMKAMPIGSKPYGGIWFFKVKNQQTVIDALIKDFKTAGIKLASETFDQE
# TLQRACEQWLDLQVRRDEIIAKMVAEQNERNKRFRPRRKPKPSEDESTAADASTIPPPPCPASRLGGMCFKCGAMRK]
#
##gff-version	3
##query	GI21662%20[Drosophila%20mojavensis] 1 1678
scaffold_6359	Scipio	protein_match	991231	991347	0.995	+	0	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1 39
scaffold_6359	Scipio	protein_match	993477	993593	0.995	+	0	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1 39
scaffold_6359	Scipio	protein_match	1004711	1004957	0.995	+	0	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 40 121
scaffold_6359	Scipio	protein_match	1005059	1005346	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 122 217
scaffold_6359	Scipio	protein_match	1006638	1007310	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 218 442
scaffold_6359	Scipio	protein_match	1007385	1007824	0.995	+	1	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 443 588
scaffold_6359	Scipio	protein_match	1008703	1009140	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 589 734
scaffold_6359	Scipio	protein_match	1009202	1011231	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 735 1411;Mismatches=1174 1175 1176 1177 1178 1179 1180 1181 1182
scaffold_6359	Scipio	protein_match	1011846	1012104	0.995	+	0	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1412 1497
scaffold_6359	Scipio	protein_match	1012188	1012316	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1498 1540
scaffold_6359	Scipio	protein_match	1012854	1013237	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1541 1668
scaffold_6359	Scipio	protein_match	1013787	1013815	0.995	+	2	gene_id=kassiopeia_gene_id340977 GI21662 [Drosophila mojavensis];Query=GI21662%20[Drosophila%20mojavensis] 1669 1678
# protein sequence = [MKKQQHHQQQTQQQQQQRQQQKTQPMLLVFGILTIFWAQVAEGADLVISVPNASSNDNAFYRIDYSPPFGYPEPNTTI
# PASEIGQDIKLSRVLPGSEYNFWLYYTNSTHRELLTWTVNITTAPDPPDNLSVQLRSSKSAFITWKPPSTGKYSGFKIKVLGLTEPPHSEYNRSYLLA
# GNDTLQLSAKELTPGGTYQVQAYTVYQGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPYPAGLYTHYKVSITPDDAIESVLYVEREGEPP
# GPAQAAFKGLVPGRAYNISVQTVSENETSVPTTARYFTVPERPLNVSFDPKYTTTSSFRVRWEPPRTYSEYESFEISISTSRRAFTVPRTEASSLYFD
# YPEILEPGKSYDVVVKTISDNVHSWPASAEITLRPLPVRNLHGYLDDRSNAVHLSWEPAETGKQDSYRISYYEKYNDTDEAVSTPQQQVETTLTEYKL
# DQLLPGRRYHIEVQALSNGISSNGTSLIRDTRPAAPIIQELRSINQGLNISWRSDVTSQQDRYEVHYQRNGTKEERTISTNLTNLIIKYLHPGSGYEI
# KVYAISHEMRSEPHAYFQAVFPKPPRNLTQRTVNTNLVLLHWQPPEGSDFSEYAVRYRTAASTWQRLPNVHEPEARIEDMRYGERYLVQVNTLSFGVE
# SPTPLELNITMPPQPVSNVVPLVDSRNLTLEWPRAEGHVDYYTIKWWATDEPQLVEYKNVTQLPAEQEVGSSNVRIPIEDLSPGRQYKFEVQASSNGI
# RSGITHLSTRTMPLIQSDVFISNALDEDQQQGQSEQEHASNSNSIILNYTPTPASSTRFDLYRFSLGDPLIKDKEKLANDTERKLSFTGLTPGRLYNI
# TVWTVSGGVASLPIQRLYRLHPLPIGDLQAVQLDAREITLRWTAPAGEYTDFELQYLSADAESPQLLQNITTQTQLTLQRLQPYHNYTFTVSARAGSE
# PGSAMMRTSAPISASYQTLPAAPGRVDYFQPSDVQPGEISFEWQLAAQEQHGPIEHFRISCQNADDAGDTVSYELPANATQARIENLVPGNTYIFRIQ
# AKSALGYGYGAEREHRQLMPILAPPTPPAHIMPIAMGHTSTTIQIRYRQSYFSNAHGLVRWYTIIVAEDVGKNASGLEMPSWQDVQSYTVWLPYQAIE
# PYNPFINASLRNLGFEDxxxxxxxxxRDDVFWLASSLAVALCVLCLLAALGYYRYRCHSMRRATNKLARMPDELAPLPDGYITPNRPIHIKDFPEHYR
# LMSADSDFRFSEEFEELKHVGRDQACSFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCW
# ESNSRAIVMLTRCFEKGREKCDQYWPIDRVPIFYGDIKVQLITDTHFLDWSIAEFMVSRNCESRIMRHFHFTTWPDFGVPEPPQSLVRFVRAFRDVIG
# TDMRPIIVHCSAGVGRSGTFIALDRILQHINKSDYVDIFGIVFAMRKERVFMVQTEQQYVCIHQCLLAVLEGKEHLLADSHELHENDGYEVTKIYLER
# PKPNSNSNRNSSNGHMLHATPLRASLALAEELDRELELELEQQQRQQLDEDDEEADEDDDQQPLNNETTATLSTASSTASSSNSNSNSNSSLGGSSNQ
# EQQQQQQQQQQQQQQQQQQQQHNDEGIAETGI]
#
##gff-version	3
##query	GI21789%20[Drosophila%20mojavensis] 1 1031
scaffold_6359	Scipio	protein_match	3893245	3894281	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 1 346
scaffold_6359	Scipio	protein_match	3927224	3927337	1.0	+	1	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 347 384
scaffold_6359	Scipio	protein_match	3927427	3927503	1.0	+	1	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 385 409
scaffold_6359	Scipio	protein_match	3929134	3929315	1.0	+	2	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 410 470
scaffold_6359	Scipio	protein_match	3932654	3932800	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 519
scaffold_6359	Scipio	protein_match	3944150	3944299	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 520
scaffold_6359	Scipio	protein_match	3958563	3958706	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 518
scaffold_6359	Scipio	protein_match	3958875	3959081	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 539
scaffold_6359	Scipio	protein_match	3960404	3960556	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 521
scaffold_6359	Scipio	protein_match	3963431	3963562	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 514
scaffold_6359	Scipio	protein_match	3963587	3963715	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 513
scaffold_6359	Scipio	protein_match	3963993	3964082	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 500
scaffold_6359	Scipio	protein_match	3968326	3968472	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 471 519
scaffold_6359	Scipio	protein_match	3969092	3969238	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 520 568
scaffold_6359	Scipio	protein_match	3969319	3969395	1.0	+	0	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 569 594
scaffold_6359	Scipio	protein_match	3976192	3976442	1.0	+	1	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 595 677
scaffold_6359	Scipio	protein_match	3976576	3977202	1.0	+	2	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 678 886
scaffold_6359	Scipio	protein_match	3977257	3977690	1.0	+	2	gene_id=kassiopeia_gene_id341103 GI21789 [Drosophila mojavensis];Query=GI21789%20[Drosophila%20mojavensis] 887 1031
# protein sequence = [MRYDVQELLLHQSAEDPFARFANGMAYHPFLQLSQRPTDFSVSSLLTAGSNSNSNNNTNNSNNNNNSNNNNNSNNNSS
# NNNAAQALSSPGSGGAANFRGSPSQLSPLSNHSNNNNNNNNNNSNNKNNNHLNSSESALSGSQANTPTATPPPPLPPVGVAAAGPLPSLPAHHSPSVA
# PPPPPPPQQQPPAAGLPQHPVHPTHPPPLPQQQQQQQQQQQQQQQHLGTQQQQPPPPPYFPAAALAALAGSPAGPHHPGLYSAAGGLRFPPHPAHPHA
# HHPLGTAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIV
# AADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGIGSGGNGNGNGGGGGGGIATGGQNSAQRRNDGDAGGRHAVLSCLLARLPRLPRLPPPPLA
# QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQTALPTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEK
# ITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPAHAAALLDNQQDDDDKLLDVVGPPQSPLLPLSH
# SLQQMHAHQHSAALAAWFNHLAGAGAGEHAAAANAEDALRRRLQADDVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEGVGGGGAAAAAAAAAAGLN
# AAGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMNPAGLNPGLLFNAQLALAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFS
# PYSLPGSLGSAFDAVTPGSNANRSGGGGGAGAGGGAGGGLGLDNGPRSLSSSPRPRASSHSPPTRPISMSPTTPPSLLKRQSQHSPSELKSMEKMVNG
# LEVQHNGSAAAAAAAAAAAAAAAAAASLLSEESSQLQHHTQAHHTHPHTHPHGHPHGLTHATHHASAGTDQ]
#
##gff-version	3
##query	GI14711%20[Drosophila%20mojavensis] 1 277
scaffold_6473	Scipio	protein_match	13710751	13710765	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 1 5
scaffold_6473	Scipio	protein_match	13710028	13710234	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 6 74
scaffold_6473	Scipio	protein_match	13709680	13709808	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 75 117
scaffold_6473	Scipio	protein_match	13709175	13709298	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 118 158
scaffold_6473	Scipio	protein_match	13708391	13708491	1.0	-	2	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 159 192
scaffold_6473	Scipio	protein_match	13707263	13707363	1.0	-	2	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 159 192
scaffold_6473	Scipio	protein_match	13705140	13705240	1.0	-	2	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 159 192
scaffold_6473	Scipio	protein_match	13703700	13703800	1.0	-	2	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 159 192
scaffold_6473	Scipio	protein_match	13700978	13701021	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 193 207
scaffold_6473	Scipio	protein_match	13700635	13700678	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 193 207
scaffold_6473	Scipio	protein_match	13700100	13700241	1.0	-	1	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 208 254
scaffold_6473	Scipio	protein_match	13699404	13699472	1.0	-	0	gene_id=kassiopeia_gene_id334228 GI14711 [Drosophila mojavensis];Query=GI14711%20[Drosophila%20mojavensis] 255 277
# protein sequence = [MADDEKKAAAAPAAPAAAAAPAAAPAKAAAAPAAAAANGKAAAAPAANGKAAAAPAAPAGPPKDPNDPKVKAEEAKKA
# KQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYYERMYICE
# GQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKVKEEVE
# AEA]
#
##gff-version	3
##query	GI14769%20[Drosophila%20mojavensis] 1 544
scaffold_6473	Scipio	protein_match	12715190	12715408	1.0	-	0	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 1 73
scaffold_6473	Scipio	protein_match	12713945	12714084	1.0	-	0	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 74 120
scaffold_6473	Scipio	protein_match	12713181	12713281	1.0	-	1	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 121 153
scaffold_6473	Scipio	protein_match	12710162	12710262	1.0	-	1	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 121 153
scaffold_6473	Scipio	protein_match	12709568	12709723	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 154 205
scaffold_6473	Scipio	protein_match	12709269	12709489	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 206 279
scaffold_6473	Scipio	protein_match	12709092	12709195	1.0	-	0	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 280 314
scaffold_6473	Scipio	protein_match	12708429	12708544	1.0	-	1	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 315 352
scaffold_6473	Scipio	protein_match	12706933	12707048	1.0	-	1	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 315 352
scaffold_6473	Scipio	protein_match	12705821	12705880	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 353 372
scaffold_6473	Scipio	protein_match	12705640	12705744	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 373 407
scaffold_6473	Scipio	protein_match	12702971	12703168	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 408 473
scaffold_6473	Scipio	protein_match	12702675	12702886	1.0	-	2	gene_id=kassiopeia_gene_id334285 GI14769 [Drosophila mojavensis];Query=GI14769%20[Drosophila%20mojavensis] 474 544
# protein sequence = [MGGPKKEENPPGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPEGDKTVLAQKLEKTEA
# YFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGAMTIFAEANIDVDLRMLRSFRVLRPLKLVSRIPSLQVVLKSIIKAMAPLLQIGLLV
# LFAIVIFAIIGLEFYSGALHKTCYSLEDPNKLVKEGESETPCNTDNTTEKAGGSYVCNITTSMCLEKWDGPNSGITSFDNIGFAMLTVFQCITMEGWT
# AILYWTNDALGSSFNWIYFVPLIVIGSFFMLNLVLGVLSGEFSNERNRVERRMEFQKCRFRAMFQTAMVSYLDWITQAEEVILAEERTTEEEKMHIME
# ARRRNAAKRKKLKSLGKSKSTDTEEEEAEEDYGDDGYLKTRSKPQGSCTGFWRAEKRFRFWIRHTVKTQWFYWFVIVLVFLNTVCVAVEHYGQPTFLT
# EFLYYAEFIFLGLFMSEMFIKMYALGPRIYFESSFNRFDCVVISGSIFEVIRSEVKGASFVFSVLRPPAVAHLK]
#
##gff-version	3
##query	GI14770%20[Drosophila%20mojavensis] 1 1281
scaffold_6473	Scipio	protein_match	12702379	12702623	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 1 82
scaffold_6473	Scipio	protein_match	12700471	12700806	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 83 194
scaffold_6473	Scipio	protein_match	12698643	12699206	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 195 382
scaffold_6473	Scipio	protein_match	12695043	12695186	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 383 430
scaffold_6473	Scipio	protein_match	12694603	12694804	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 431 497
scaffold_6473	Scipio	protein_match	12692373	12692537	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 498 552
scaffold_6473	Scipio	protein_match	12691726	12691836	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 553 589
scaffold_6473	Scipio	protein_match	12691018	12691107	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 590 619;Mismatches=618 619
scaffold_6473	Scipio	protein_match	12682403	12682585	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 620 680
scaffold_6473	Scipio	protein_match	12681528	12681619	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 681 711
scaffold_6473	Scipio	protein_match	12680083	12680177	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 681 712
scaffold_6473	Scipio	protein_match	12675502	12675783	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 713 806
scaffold_6473	Scipio	protein_match	12674496	12674698	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 807 873
scaffold_6473	Scipio	protein_match	12674191	12674399	0.997	-	2	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 874 943
scaffold_6473	Scipio	protein_match	12663120	12663241	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 944 984
scaffold_6473	Scipio	protein_match	12662154	12662317	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 985 1038
scaffold_6473	Scipio	protein_match	12661124	12661324	0.997	-	2	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 1039 1105
scaffold_6473	Scipio	protein_match	12658796	12658947	0.997	-	2	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 1106 1156
scaffold_6473	Scipio	protein_match	12658188	12658414	0.997	-	0	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 1157 1232
scaffold_6473	Scipio	protein_match	12657969	12658116	0.997	-	1	gene_id=kassiopeia_gene_id334286 GI14770 [Drosophila mojavensis];Query=GI14770%20[Drosophila%20mojavensis] 1233 1281
# protein sequence = [MRSIISLLFLLFLFILIFALLGMQLFGGQFNLPGGTPETNFNTFPIALLTVFQILTGEDWNEVMYQGIISQGGAKKGM
# IYSIYFIVLVLFGNYTLLNVFLAIAVDNLANAQELTAAEEEQVEEDKEKQLQELEKEMEALQGDGVHLENGDGTVATSKGKGKKKEEEKKEEEEVTEG
# PKPMLPYSSMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAEDPVRENSRRNKILNYFDYAFTGVFTIEMLLKIVDLGVILHPGSYLREF
# WNIMDAVVVICAAVSFGFDMSGSSAGQNLSTIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLFNGKFFYCTD
# ESKHTSEECQGSYFKYEEDELLPKQEMRVWKPRSFHYDNVAAAMLTLFAVQTGEGWPQVLQHSMAATYEDRGPIQNFRIEMSIFYIVYFIVFPFFFVN
# IFVALIIITFQEQGEAELQDGEIDKNQKSCIDFTIGARPLERYMPKNRNTFKYKVWRIVVSTPFEYFIMMLIVFNTLLLMMKYHNQSEMYEKSLKYIN
# MGFTGMFSVETVLKIIGFGFKNFFKDPWNIFDLITVLGSIVDALWMEFGxxSNSINVGFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLL
# IAMLFFIYAIIGMQVFGNIKLGTVENSITRHNNFQSFEQGVMLLFRCATGEAWPNIMLACLKGKACDDDAEKGAGEYCGSTLAYAYFVSFIFFCSFLM
# LNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGRIHYTEMYDMLKNMDPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFAL
# IRENLSIKMRAPEEMDQADLELRETITNIWPLQAKKMLNLLVPPIDQLNKGKLSVGKIYAGFLILESWRNTRFGQIDSGMPMLDLQDSSRHPSQESLT
# GPDAGHLHPGHSYINGHRHSPSSRHNGSPLARSPSPRRRGHQYIHHDIGFSDTVSNVVEMVKETRHPRHGNNHPRYPRGSWSASTSPARSPSPSRYGG
# HLSRSKRTQLPYPTYGTTSLCQRSRSPSPARLQEMRERDRLGYGIDMGGAHVQHSYPTLASRRAGIGRRLPPTPSKPSTLQLKPTNINFPKLNASPTH
# THHSTPHSVHSLPHHRDLLRDPRDVYYSSRERDRDRERFRDRDRLHEYDVRYEYRDRERELYEREREREREVERERLEYIAPLSFEQALAMGRTGRVL
# PSPVLNGFKPKSGLNTRHSDSDEEDWC]
#
##gff-version	3
##query	GI14913%20[Drosophila%20mojavensis] 1 783
scaffold_6473	Scipio	protein_match	8653100	8653360	0.991	-	0	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 1 87
# gap 88 94
scaffold_6473	Scipio	protein_match	8650625	8650685	0.991	-	0	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 95 114
scaffold_6473	Scipio	protein_match	8650504	8650557	0.991	-	2	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 115 132
scaffold_6473	Scipio	protein_match	8650251	8650310	0.991	-	2	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 115 134
scaffold_6473	Scipio	protein_match	8650136	8650195	0.991	-	2	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 133 152
scaffold_6473	Scipio	protein_match	8649630	8649689	0.991	-	2	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 133 152
scaffold_6473	Scipio	protein_match	8647419	8649310	0.991	-	2	gene_id=kassiopeia_gene_id334421 GI14913 [Drosophila mojavensis];Query=GI14913%20[Drosophila%20mojavensis] 153 783
# protein sequence = [MSHNDEAESNSENEADDEAESDTDDKDVKSRKLNAKHKEIKGDKKKKGKDRKETAQPCGSFIGSCVSDIIKVTFEEKY
# DEKVLEAKS.......ESKQSVQACDSAQGDATNKTESKLTIEGSSDSSSDTDSESSHTLRAVSNSVSDEKSNTETPQPSSDNDDDKECSGIKHLIKY
# VTQIVVAEIVRGAKEDSGADDVDELSKKISSSVIDEVVEATVKNLNFDKITDETMDALKKIVSANVLLEKVISMSAIRAVGAMDATEEELDIMRYKFF
# KSELLQKRKKQKVDTEALLDAPGFAARIYDDKLTYCVADFIINDIIENLIDDTSEHLTAYVAEYITEDILDELSAAYSEYLKKSNGTNDSTSEDDTPS
# SSVSASDISQSTPRASDSVIWKQFIDYDDSCSYGLPVPRVYERSIFTYVDFIDNPNYILTVPNKPSYEKMMTDRVNFNLEPNNFVKVGGRWFECISNL
# LRLHSAWFAHKKWDVEVFEISVSDVSPSAFELIYEWMRFRTPITLFNAVKVLQASRFLEIDILKKDCFKLISQSYVREKIGFKLFLDAEQKPLLGDVR
# DILLDRVRSYFLPLVGSDKFKDLKLRHLLSLLNRDTIGVNCEAEVFFSALRWLSKSEKRLKHLETVMRCVRFPFLPMPMLFSLRNMGMEAEKKPFGTT
# ERVLQEFQSNPDMRQWILDTMTYISLHFQSENDGENIKREHKEYKVFRPRNWMYHPRCPYHLQRIKYPYQHSFTEDDFDKFVHTVQLEWLGDYPPPGD
# MQSVEFDRITVYAPKLRPD]
#
##gff-version	3
##query	GI14942%20[Drosophila%20mojavensis] 1 797
scaffold_6473	Scipio	protein_match	7789193	7789360	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 1 56
scaffold_6473	Scipio	protein_match	7788331	7788404	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 57 81
scaffold_6473	Scipio	protein_match	7788159	7788231	1.0	-	1	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 82 105
scaffold_6473	Scipio	protein_match	7785582	7785728	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 106 154
scaffold_6473	Scipio	protein_match	7785207	7785497	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 155 251
scaffold_6473	Scipio	protein_match	7784955	7785124	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 252 308
scaffold_6473	Scipio	protein_match	7784697	7784866	1.0	-	1	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 309 364
scaffold_6473	Scipio	protein_match	7783482	7783753	1.0	-	2	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 365 455
scaffold_6473	Scipio	protein_match	7783248	7783392	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 456 503
scaffold_6473	Scipio	protein_match	7782988	7783159	1.0	-	2	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 504 561
scaffold_6473	Scipio	protein_match	7782430	7782549	1.0	-	1	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 562 601
scaffold_6473	Scipio	protein_match	7782031	7782208	1.0	-	1	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 602 660
scaffold_6473	Scipio	protein_match	7781662	7781812	1.0	-	0	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 661 710
scaffold_6473	Scipio	protein_match	7780396	7780501	1.0	-	2	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 711 746
scaffold_6473	Scipio	protein_match	7777233	7777332	1.0	-	2	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 711 744
scaffold_6473	Scipio	protein_match	7771540	7771699	1.0	-	1	gene_id=kassiopeia_gene_id334449 GI14942 [Drosophila mojavensis];Query=GI14942%20[Drosophila%20mojavensis] 745 797
# protein sequence = [MPNVRSGEVERLLKEYRQNQELVRRIGGHYYQIIYPVQLRHHEKMGISTREVSPPKKHFHRTSLLIKAFNHKFRLDLE
# LNSQLLSPNIQQKHYHVSGYQVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNETFVIHPFYGGDLSKHPHVIFEARTKANKGCANSGN
# LDSWRLSRRTKHLSAGVVDEIHPNGAGRYKRDVREATKYIETAIIVDKAMFEKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKNQAV
# IDGSKDISKAISNFNDYTVRNIYQIERDTTQLLSGETFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHLLAGTMAHMIGHNIGMGHDDGLKSKSIET
# QFLLKMANLICCSVEKQKLTYVYPYHLQIELRRNCGNKIIEEDEECDCGTFEECALDPCCDSITCKLKSEAQCASGACCDQCRLRPKDYICRDSHNEC
# DLPEYCDGEMGQCPADIYKKNGSPCGLSKSGVSGYCFQGYCPTLTLQCEAIWGYGGFAADRQCYEQFNSKGSINGHCGRDANDHYIKCDPENVQCGTL
# QCKEGERQPVNDGFDQLYSRTIISIKAQEYECKATSGQLGSNNYPKHGLVKDGTPCGENLICLNQTCVSLFPHVDQTKCPTNKQGQECSDRGFCTNVN
# RCFCDMGWGGPDCSTVVLLTTPVPTEALPTPENTIKMEKKETPYENYHGSNTVFLVGVLMSVVGFVFITFTLMALCYRRKTTTLKYDPPFSKKPIPKG
# YGGAATAPNHHSVEEVSLDGSSKLVYANQAGFR]
#
##gff-version	3
##query	GI15159%20[Drosophila%20mojavensis] 1 1454
scaffold_6473	Scipio	protein_match	3121949	3122416	1.0	-	0	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 1 156
scaffold_6473	Scipio	protein_match	3115498	3115926	1.0	-	0	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 1 143
scaffold_6473	Scipio	protein_match	3113769	3114004	1.0	-	0	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 157 235
scaffold_6473	Scipio	protein_match	3113224	3113703	1.0	-	1	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 236 395
scaffold_6473	Scipio	protein_match	3113028	3113128	1.0	-	1	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 396 428
scaffold_6473	Scipio	protein_match	3110971	3111088	1.0	-	2	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 429 468
scaffold_6473	Scipio	protein_match	3109569	3110895	1.0	-	1	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 469 910
scaffold_6473	Scipio	protein_match	3108821	3109044	1.0	-	0	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 911 985
scaffold_6473	Scipio	protein_match	3107553	3108763	1.0	-	1	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 986 1388
scaffold_6473	Scipio	protein_match	3107285	3107481	1.0	-	2	gene_id=kassiopeia_gene_id334664 GI15159 [Drosophila mojavensis];Query=GI15159%20[Drosophila%20mojavensis] 1389 1454
# protein sequence = [MYACAYVVVLAFTCLAAAAGPVIEHAEVIDEGDSFLDNPHYLNNEQIGELFARLSRDYPGLAQTYSIGRSIRGRELHA
# LALNAPAPDGNGDDLLRPMVKLVANIQGDEALGRQIVLYMAEYLASNYQLDSEVQRLLNTTEIHFLPSCNPDGFAAAKEGNCESLPNYVGRGNAAGVD
# LNRDFPDRLDQHHINQLRSQSRQPETAALAEWILKNPFVLSANFHGGAVVASYPYDNSIAHNDCCEESLTPDDRVFKHLAHSYSDNHPIMRRGNNCND
# SFAGGITNGANWYELSGGMQDFNYAFTNCFELTIELSCCKYPPASSLPEEWQRNKRALLQLLRQAHIGVKGLVQDTSGYPIPDATIIVSGLEDKPIRT
# SKRGEYWRLLTPGLYSIYAAAFGYQSSVPQQVHVTNENAEALRLDFKLTPVESNFDGKFRKQIVERAEPAEQLKQKYDGFLTPTEFKHHNFMAMESYL
# RNLSASYPTLTRLYSIGKSVENRDLWVMEISTSPGNHVPGVPEFKYVANMHGNEVVGKEMLLLLTKYMLERYGNDDRITRLVNGTRMHFLYSMNPDGY
# EVSHEGDRTGGVGRPNAHMVDLNRNFPDQYGTDKYNKVTEPEVAAVMNWTLSIPFVLSANLHGGSLVANYPFDDNENDFNDPFSRLRDSSISGRKLNP
# TEDNELFRHLALVYSKAHATMHLGQPCALFQNELFTDGITNGAQWYSVTGGMQDWNYVRAGCMELTIEMGCDKFPLAKELPQYWRDNREPLLRLIEQV
# HHGIHGFVRSSIGTPIAGAAIALDGGNHKTYSGTFGDYWKLALPGRHNVTVLSDGFAPLRVEVEVPDAEPFGMRLDVTLMRDDPQHWASANDFRIIEN
# VVNTRYHTNAELRNRLAEFENQNPQIASFGYADNEFSRHFNYLKLTSNIGEPEEHKYKLLVISSLFDTAAPLGREIMLNLVRHLIEGHKLQEASVVQL
# LERSVIYFLPQTEKFDPIFAMYNANNSVCDPMMSEELAERILSPETEPARDVLLQFLRNERFDLMLTFSGGSSDLSFPHADSILEKFAHSIRRTEFNY
# SPLQCSSSATRQLHHDVTERLTNLLYNMYQIPMFTLGLSCCRMPVHTEIASVWRTSIEKIRNFLALVRTGITGLVQNDRGQPLREAFVRLVEHPTIHN
# VTRNAARFQLMLPKGLYGLEVGAPNYESKIVKTLVQQGVFSDLGVIKLNGYSLIKGEVTELNTLSKTTTSLTGLVLDDNNHPIRNAKVSLIQPPGWTH
# VRNFTNSMGEYRLSAVPLGSITIKVEAPRHFEATRDLRLPQPGQPIENVIFHLKFNAHVFGLPRFLFIIVASVLIIVGVVVCVLCAQFWFYRRHRGKM
# PYYNFSLLPQKGKEQFELDDDAGDDGETELFRSPIKRGMTIQPYFDEEQLEHILHTDDEDDDEDGHGHGNGLDLDEQELQLDVADESGDEIVMLPHHN
# RRRQ]
#
##gff-version	3
##query	GI15289%20[Drosophila%20mojavensis] 1 830
scaffold_6473	Scipio	protein_match	108561	109524	1.0	-	0	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 1 321
scaffold_6473	Scipio	protein_match	107463	107850	1.0	-	2	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 322 451
scaffold_6473	Scipio	protein_match	102003	102062	1.0	-	1	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 452 471
scaffold_6473	Scipio	protein_match	87151	87210	1.0	-	1	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 452 471
scaffold_6473	Scipio	protein_match	86778	87081	1.0	-	1	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 472 572
scaffold_6473	Scipio	protein_match	85929	86702	1.0	-	0	gene_id=kassiopeia_gene_id334794 GI15289 [Drosophila mojavensis];Query=GI15289%20[Drosophila%20mojavensis] 573 830
# protein sequence = [MTPVGVNGVKLNYGPPPKDAIERACTMKEELLRKIEKLGARLPPNTLDQLIDELGGPDNVAEMTGRRGRVVQSDDGSI
# QYESRTESDVPLETLNITEKQRFMDGQKDVAIISEAASSGISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGER
# RFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALETVMRTIMGYETPLVPPPTDYNGEFFKDIAGALVGVGIIVNSESHPGVLSLDKDY
# NNISKFLNRILGCPVDLQNRLFKYFTDTMAAIINQAKRGGRFDLGIVDMRICSTSTRASTRRISCAITSARLSWWLSSSSSRRLATPGRRTAAAAAAR
# RRRRRHAARRRSCARSTGPTRVCRCATNRSLSWRRSIARSAVRRPSRIGPSNTMPRCTPAPTPIGMAIAATSVWATTVSACMLLDTCAPYFTSQATRK
# KLDYFLVFFQRYYWHKKSHPVFSKSENTSDLFPILVDHTYRDCLASVRPKLKLYKNLEQAKEAIDQLQEQLYPQLRACSNNNNNAQDSSLDTINEINE
# LDDGVTDDSGSSDDQRERQAAGGSEEADQGNWTEYEVEPVAPPPPPEKSKEDLEFEQMYEKMTSDSYQERLKEPPLKATHKDIPVPMMARLQKKSYDQ
# LNCNNAMQISKGNASAPTTPTNHGHNWDGGNHLTSATAATSSNDVAATEASAGGGCSGKGSGAVPFVLMVRGNKGGKQQFKSFVAPSDSQLAINLKLQ
# EQKTREEKERVKRLTLNITERIEEEDYQESLLPLQQRNFTQSYYQKPNKNKFKHQKGAPDADLIFH]
#
##gff-version	3
##query	GI15296%20[Drosophila%20mojavensis] 1 859
scaffold_6473	Scipio	protein_match	70928	71408	1.0	+	0	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 1 160
scaffold_6473	Scipio	protein_match	71460	71516	1.0	+	2	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 161 179
scaffold_6473	Scipio	protein_match	71579	71807	1.0	+	2	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 180 256
scaffold_6473	Scipio	protein_match	72940	73024	1.0	+	1	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 257 284
scaffold_6473	Scipio	protein_match	73856	73940	1.0	+	1	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 257 284
scaffold_6473	Scipio	protein_match	74986	75420	1.0	+	0	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 285 429
scaffold_6473	Scipio	protein_match	75484	75678	1.0	+	0	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 430 494
scaffold_6473	Scipio	protein_match	75988	77019	1.0	+	0	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 495 838
scaffold_6473	Scipio	protein_match	77090	77152	1.0	+	0	gene_id=kassiopeia_gene_id334801 GI15296 [Drosophila mojavensis];Query=GI15296%20[Drosophila%20mojavensis] 839 859
# protein sequence = [MQQQEKLLLVALCIMASTLTTLALGEQTLAAAAAQQSPAKLEQNPCVNKGTCHACIQTQNCGWCMKPDYGDRSRCFLH
# TPKADICPEEYIWNPDTSERILINKDLTLASGGAAWAGGQYASGVGYESSAHGQSSASGSYSASSSSSSYGSSSSSGSSSGYTAGEIVQIKPQRVSLK
# LRINEVHNLDVSYSQAVDYPVDLYYLMDLSKSMEDDKEKLSALGDKLSETMKRITSNFRLGFGSFVDKVLMPYVSTIPKKLEHPCDNCKAPYGYRNHM
# PLSNNTESFSNEVKEAAVSGNLDAPEGGFDAIMQAIACRQQIGWREKARRLLVFSTDAGFHYAGDGKLGGVITPNDGECHLNAQGMYTHSIIQDYPSI
# SQINQKVKQNAINIIFAVTQNQYAVYQKLSAHIEGSSSAILSNDSSNVVDLVREEYGKISSTVEMKDNATGDVKVTYLSSCLTNGPQIKTNKCSGLKV
# GDKVTFTAQITVTKCPTDPRHWNQAIQIYPVGINESMIIDLEMLCSCPCEHAGSTGYELHSQKCHNHGTYMCGICECDEQHFGNTCECSTSDMHLNNG
# NDNMCRPSNDTSVAECNGRGSCVCGACECHKRTNPDEIISGKYCECENFSCERRKNLLCSGPDHGTCECNRCVCKPGWTGNSCDCQTSKDTCMPPGGG
# EICSGHGTCECGVCKCKTMDEGRYSGKYCDKCPTCSGRCHDLKDCVQCQMYQTGQLKNGDDCAKNCTTFTAISVDTVKIDEHKDEQLCVFFDEDDCKF
# TFKYSEVGELVVYAQQEKECPPKVFMLGIVLGVIAAIVLVGLAILLLWKLLTTIHDRREFARFEKERMNAKWDTGENPIYKQATSTFKNPIYAGK]
#
##gff-version	3
##query	GI15400%20[Drosophila%20mojavensis] 1 65
scaffold_6473	Scipio	protein_match	2283635	2283707	1.0	+	0	gene_id=kassiopeia_gene_id334903 GI15400 [Drosophila mojavensis];Query=GI15400%20[Drosophila%20mojavensis] 1 24
scaffold_6473	Scipio	protein_match	2325175	2325272	1.0	+	2	gene_id=kassiopeia_gene_id334903 GI15400 [Drosophila mojavensis];Query=GI15400%20[Drosophila%20mojavensis] 25 57
scaffold_6473	Scipio	protein_match	2338644	2338765	1.0	+	2	gene_id=kassiopeia_gene_id334903 GI15400 [Drosophila mojavensis];Query=GI15400%20[Drosophila%20mojavensis] 25 65
# protein sequence = [MLKLNVIVTGACRRVSNASSMCNQASGDNFGPKTFPRKNDSNNGSSNNSNNSNNCNNFIAVDNVL]
#
##gff-version	3
##query	GI15415%20[Drosophila%20mojavensis] 1 138
scaffold_6473	Scipio	protein_match	2763950	2764069	1.0	+	0	gene_id=kassiopeia_gene_id334918 GI15415 [Drosophila mojavensis];Query=GI15415%20[Drosophila%20mojavensis] 1 40
scaffold_6473	Scipio	protein_match	2765550	2765603	1.0	+	0	gene_id=kassiopeia_gene_id334918 GI15415 [Drosophila mojavensis];Query=GI15415%20[Drosophila%20mojavensis] 41 58
scaffold_6473	Scipio	protein_match	2776325	2776381	1.0	+	0	gene_id=kassiopeia_gene_id334918 GI15415 [Drosophila mojavensis];Query=GI15415%20[Drosophila%20mojavensis] 41 59
scaffold_6473	Scipio	protein_match	2776824	2777000	1.0	+	0	gene_id=kassiopeia_gene_id334918 GI15415 [Drosophila mojavensis];Query=GI15415%20[Drosophila%20mojavensis] 60 118
scaffold_6473	Scipio	protein_match	2778189	2778248	1.0	+	0	gene_id=kassiopeia_gene_id334918 GI15415 [Drosophila mojavensis];Query=GI15415%20[Drosophila%20mojavensis] 119 138
# protein sequence = [MSMYSTTDKMKMSAPSCFPGRYSPSYRSSEQMRRCMPNPSSRLLEDASLLCNSWSARQNGDIFAGINDGILSRAEALA
# AVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQLEAGRGLWAVGRGPWAVGRD]
#
##gff-version	3
##query	GI15442%20[Drosophila%20mojavensis] 1 2834
scaffold_6473	Scipio	protein_match	3156011	3156040	0.999	+	0	gene_id=kassiopeia_gene_id334945 GI15442 [Drosophila mojavensis];Query=GI15442%20[Drosophila%20mojavensis] 1 10
scaffold_6473	Scipio	protein_match	3156102	3156132	0.999	+	0	gene_id=kassiopeia_gene_id334945 GI15442 [Drosophila mojavensis];Query=GI15442%20[Drosophila%20mojavensis] 11 20
scaffold_6473	Scipio	protein_match	3165315	3173625	0.999	+	2	gene_id=kassiopeia_gene_id334945 GI15442 [Drosophila mojavensis];Query=GI15442%20[Drosophila%20mojavensis] 21 2785;Mismatches=1537;Gap=M1517 D5 F2 M1248
scaffold_6473	Scipio	protein_match	3212961	3213089	0.999	+	0	gene_id=kassiopeia_gene_id334945 GI15442 [Drosophila mojavensis];Query=GI15442%20[Drosophila%20mojavensis] 2786 2828
scaffold_6473	Scipio	protein_match	3224007	3224153	0.999	+	0	gene_id=kassiopeia_gene_id334945 GI15442 [Drosophila mojavensis];Query=GI15442%20[Drosophila%20mojavensis] 2786 2834
# protein sequence = [MLYICYLLRNPFSLSQIATKAQPSTQKPSTAKPTVGSTTVAQPSTQKPSTAKPTVGSTSTVQPSTQKPSTAKPTIGST
# STVQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIG
# STSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIESTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPT
# IGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAK
# PTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPST
# AKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTVAQPSSQKPSTAKPTVGSTSTAQPSTQKP
# STAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTVAQPSSQ
# KPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTTTAQPSTKKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQPS
# TQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTVAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQ
# PSTQKPSTAQPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTVQPSTQKPSTAKPTVGSTTT
# AQPSTQKPSTVKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQPSTQKTSTAKPTVGSTSTAQPSTQKPSTAKPTIGST
# STAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIG
# STSTAQPSTQKPWTAKPTVGSTTTAQPSTQKPSTVKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPT
# IGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAK
# PTIGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQPSTQKPST
# AKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPNYGSTSTAQPSTQKPSTAKPTGGSTSTAQPSTQKLSTDKPTVGx------LAPRS
# LRLQSQQVGSTTTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTIGSSSTAQPSTQKPSTAKPTVGSTSTAQSSTQKPSTAKPTVGSTSTAQPST
# QKPSTAKPTVGSTTVAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTTVAQP
# STQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTIGSTSTA
# QPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTS
# TAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTTTAQRSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGS
# TTVAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTI
# GSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTIGSTTTAQPSTQKPSTVKPTVGSTTTAQPSTQKPSTAKP
# TVGSTPTAQPSTQKPSTAQPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKTSTA
# KPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPS
# TAKPTVGSTSTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTVKPTVGSTTTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQK
# PSTVKPTVGSTTTAQPSTQKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTTVAQPSTQKPSTAKPTVGSTSTAQPSTQKTSTAKPTVGSTSTAQPST
# QKPSTAKPTIGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTAKPTVGSTSTAQP
# STQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTSTAQPSTQKPSTAKPTVGSTTTAQPSTQKPSTPTANCQQQQQQLEQQQQQQQQQQQQQQQQQQ
# QQQQQQLEQQQLLAVKAR]
#
##gff-version	3
##query	GI15738%20[Drosophila%20mojavensis] 1 130
scaffold_6473	Scipio	protein_match	9549769	9549876	1.0	+	0	gene_id=kassiopeia_gene_id335233 GI15738 [Drosophila mojavensis];Query=GI15738%20[Drosophila%20mojavensis] 1 36
scaffold_6473	Scipio	protein_match	9550472	9550543	1.0	+	0	gene_id=kassiopeia_gene_id335233 GI15738 [Drosophila mojavensis];Query=GI15738%20[Drosophila%20mojavensis] 37 60
scaffold_6473	Scipio	protein_match	9550609	9550707	1.0	+	0	gene_id=kassiopeia_gene_id335233 GI15738 [Drosophila mojavensis];Query=GI15738%20[Drosophila%20mojavensis] 61 93
scaffold_6473	Scipio	protein_match	9550818	9550925	1.0	+	0	gene_id=kassiopeia_gene_id335233 GI15738 [Drosophila mojavensis];Query=GI15738%20[Drosophila%20mojavensis] 94 129
scaffold_6473	Scipio	protein_match	9552057	9552167	1.0	+	0	gene_id=kassiopeia_gene_id335233 GI15738 [Drosophila mojavensis];Query=GI15738%20[Drosophila%20mojavensis] 94 130
# protein sequence = [MALNPQYEDIGKGFVQQYYGIFDDPANRANVVNFYSATESFMTFEGHQIQGAPKILEKVQSLTFQKITRVITTVDSQP
# TFDGGVLINVLGRLQCDDDPPHAFSQVFVLKANAGTYFVAHDIFRLNIHNSA]
#
##gff-version	3
##query	GI15766%20[Drosophila%20mojavensis] 1 214
scaffold_6473	Scipio	protein_match	10278937	10278994	1.0	+	0	gene_id=kassiopeia_gene_id335261 GI15766 [Drosophila mojavensis];Query=GI15766%20[Drosophila%20mojavensis] 1 19
scaffold_6473	Scipio	protein_match	10279078	10279135	1.0	+	0	gene_id=kassiopeia_gene_id335261 GI15766 [Drosophila mojavensis];Query=GI15766%20[Drosophila%20mojavensis] 1 19
scaffold_6473	Scipio	protein_match	10280165	10280278	1.0	+	2	gene_id=kassiopeia_gene_id335261 GI15766 [Drosophila mojavensis];Query=GI15766%20[Drosophila%20mojavensis] 20 57
scaffold_6473	Scipio	protein_match	10280362	10280831	1.0	+	2	gene_id=kassiopeia_gene_id335261 GI15766 [Drosophila mojavensis];Query=GI15766%20[Drosophila%20mojavensis] 58 214
# protein sequence = [MKFYMLIIAACAFLAYVHSDACVQCHSKTEERCATQPLSILAKDCPTNNSLCYTRVLNGYTIRGCSSELDNNTLNSCN
# NELECLVCSANEGCNRLIFPQYRPKCLQCSGDSINSSCAIENHAYSKVCPTYKLGDKCYIRYNGRTGEGAFKRGCLSSAQANKQCVIDGNCYTCEGHG
# CNALLANDTLIPIARDGAITVMLSLALMLACSLFHVLL]
#
##gff-version	3
##query	GI15780%20[Drosophila%20mojavensis] 1 392
scaffold_6473	Scipio	protein_match	10388816	10388838	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 1 8
scaffold_6473	Scipio	protein_match	10389635	10389676	1.0	+	1	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 9 22
scaffold_6473	Scipio	protein_match	10391934	10391957	1.0	+	1	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 23 30
scaffold_6473	Scipio	protein_match	10392697	10393069	1.0	+	1	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 31 154
scaffold_6473	Scipio	protein_match	10393559	10393777	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 155 227
scaffold_6473	Scipio	protein_match	10393850	10393942	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 228 258
scaffold_6473	Scipio	protein_match	10394017	10394097	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 259 285
scaffold_6473	Scipio	protein_match	10394244	10394322	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 286 311
scaffold_6473	Scipio	protein_match	10394873	10394951	1.0	+	0	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 286 311
scaffold_6473	Scipio	protein_match	10395177	10395418	1.0	+	2	gene_id=kassiopeia_gene_id335275 GI15780 [Drosophila mojavensis];Query=GI15780%20[Drosophila%20mojavensis] 312 392
# protein sequence = [MSDDEEYTSEEEEVVEETREETKPPQTPAEGEGDPEFIKRQDQKRSDLDEQLKEYISEWRKQRAKEEDELKKLKEKQA
# KRKISRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKETGVLGLSSAAMERNKTKEQLEEEKK
# ISLSFRIKPLAIEGFGEQKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTR
# SYDDKKKLFEGGWDEISKDVNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDEDEVEEEVVEEEDEEAEEDEEEEEE
# EEEEEEEEEEEEEEEEEEEE]
#
##gff-version	3
##query	GI15877%20[Drosophila%20mojavensis] 1 1322
scaffold_6473	Scipio	protein_match	13331001	13331577	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 1 192
scaffold_6473	Scipio	protein_match	13331640	13332307	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 193 415
scaffold_6473	Scipio	protein_match	13332371	13332694	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 416 523
scaffold_6473	Scipio	protein_match	13332914	13333058	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 524 571
scaffold_6473	Scipio	protein_match	13334169	13334316	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 524 572
scaffold_6473	Scipio	protein_match	13335866	13336044	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 572 631
scaffold_6473	Scipio	protein_match	13336086	13336194	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 632 667
scaffold_6473	Scipio	protein_match	13336279	13336530	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 668 751
scaffold_6473	Scipio	protein_match	13336685	13336849	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 752 806
scaffold_6473	Scipio	protein_match	13337433	13337474	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 807 820
scaffold_6473	Scipio	protein_match	13338233	13338765	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 821 998
scaffold_6473	Scipio	protein_match	13338836	13339103	1.0	+	0	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 999 1087
scaffold_6473	Scipio	protein_match	13339178	13339778	1.0	+	2	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 1088 1288
scaffold_6473	Scipio	protein_match	13339843	13339945	1.0	+	1	gene_id=kassiopeia_gene_id335367 GI15877 [Drosophila mojavensis];Query=GI15877%20[Drosophila%20mojavensis] 1289 1322
# protein sequence = [MRSRSNSGVRLDYYQRIVHRLILAHQEPVTGLFPASNVNSHAWIRDNVYCILAVWGLSMAYKKIADQDEDRAKCYELE
# QSCVKLMRGLLMAMMNQKDKVERFKMTQSPFDSLHAKYSSKNGLPVVGDNEWGHLQIDAVSLYLLILAQMTASGLQIVFSLDEVSFIQNLVFYIESAY
# SIPDYGIWERGDKTNHGEPELNASSIGMAKAALEAMNELDLFGARGGPASVIHVLADEAHKCQAVLQSMLPRESNSKELDSGLLCVIGFPAFAVDDAQ
# LIHNTRDAILSRLQGKYGCKRFLRDGYRTPKEDPSRLYYERWELRMFENIECEWPLFYCYLILFHAFQNDKVLVQEYANRLEKIMVRSEDGTLLIPES
# YAVPQDLVGFEYQKPGSQERVVVGRCPFLWGQSLFILGRLLQEGFLAVGELDPLNRRLGAQKKPDVVVQVVIIAEDNEIRDKLAEHDLHVQTIADVAP
# IEVQPARVLSHLYTYLGRNRKLGLSGRKSRDVGILSTSKLYSLKDRIFAFTPQFVDLSRFYIASDNELMIDILKGEINFLKSAWDLLGRPLVTLVLKR
# IHLDQDKIPLAMIQTMRKLKSGYINGTRVMLGNLKDFLNTSAITDLSFLGSTEDGYPDRLHPDQSRTMNLRGGQLRPRHLRRRMSCKGAIKKTRSINV
# DSDNLGMEGPTPLTERRLSSIVPPPWLQPNKQGHVSTFATTPEEGPSSPPQLGGDLGLRENIYPMDPQHSRSAIDRRSEFVRQQEITVPKILIQRHRV
# DTNFADTEVDELIAMLRETENLEEQGDILQYLVDTQGLDFNTAGLGLRHKTDDNAAELEQAFMDDAMLELSTAGGGGGAAAAAGAGAGAGEGKPVAAA
# VPTVIIDATSPTTKDEENANLTAASAAAANNSSNSNKNNSLNNNDSSHSEGMLEEGRVVTIRDLLKGLYEKACQEKLWGLVRHTAGMLGKRVEDLGKA
# VTDLLVRQKQVTVGMPPNNEHTITAPLPEVELRQLIHDAYGDDESTAMLTQELMVYLAMFIRTEPQLFHEMLRLRVGLIIQVMAKELSRTLNCDGEAA
# SEHLLNLSPFEMKNLLYHILSGKEFAVSSAVARGNLSIVSCKSSRVSKKSQIGLGDPEGEDALTATIDDRQGQWLRRRRLDGALNRVPRDFYSRVWTV
# LEKCQGLAIEGRVLQQSLTQEMTPGELKFALEVETALNQIPQPEYRQLVVEALMVLTLVTEHNMVPSLGDIICVEHLVHKANQLFLEDQRKVQGDATL
# CCAKLKDGKEQQQAASGMLLCGGAAYICQHLYDSAPSGSYGTMTYLSRAVALVLDCVPKHGEMECAIS]
#
##gff-version	3
##query	GI15934%20[Drosophila%20mojavensis] 1 620
scaffold_6473	Scipio	protein_match	14629067	14629248	1.0	+	0	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 1 61
scaffold_6473	Scipio	protein_match	14671358	14671481	1.0	+	1	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 62 102
scaffold_6473	Scipio	protein_match	14671546	14671714	1.0	+	0	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 103 158
scaffold_6473	Scipio	protein_match	14671943	14672039	1.0	+	2	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 159 191
scaffold_6473	Scipio	protein_match	14674786	14674981	1.0	+	1	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 192 256
scaffold_6473	Scipio	protein_match	14675114	14675235	1.0	+	0	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 257 297
scaffold_6473	Scipio	protein_match	14675824	14675977	1.0	+	1	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 298 348
scaffold_6473	Scipio	protein_match	14676734	14676905	1.0	+	0	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 349 405
scaffold_6473	Scipio	protein_match	14680673	14680802	1.0	+	2	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 406 449
scaffold_6473	Scipio	protein_match	14683080	14683209	1.0	+	2	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 406 449
scaffold_6473	Scipio	protein_match	14685758	14685948	1.0	+	1	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 450 512
scaffold_6473	Scipio	protein_match	14686967	14687289	1.0	+	2	gene_id=kassiopeia_gene_id335422 GI15934 [Drosophila mojavensis];Query=GI15934%20[Drosophila%20mojavensis] 513 620
# protein sequence = [MAAVAGLYGLGEDRQHRKKQQQQQQHQKEQLEQKEEQKKIAERKLQLREQQQQRNSLDGYGSLPKLSSQDEEGGAGHG
# FGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDVFSEE
# IKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPD
# ITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRI
# FKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTI
# ALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLGQHLKKSSLSESSSDMMDLDDGVESTPGLTETHPGRNGAAPFLGATQMQLQPPPAQ
# QQQQLQQLQLQQQNGFKQMQSTISVSAATGSAGSSLTMRHNNALAVSIETDV]
#
##gff-version	3
##query	GI15986%20[Drosophila%20mojavensis] 1 325
scaffold_6473	Scipio	protein_match	16335742	16335799	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 1 19
scaffold_6473	Scipio	protein_match	16338702	16338753	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 1 17
scaffold_6473	Scipio	protein_match	16340375	16340429	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 1 18
scaffold_6473	Scipio	protein_match	16359316	16359366	1.0	+	2	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 20 36
scaffold_6473	Scipio	protein_match	16364735	16364871	1.0	+	2	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 37 82
scaffold_6473	Scipio	protein_match	16365052	16365264	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 83 153
scaffold_6473	Scipio	protein_match	16384755	16384850	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 154 185
scaffold_6473	Scipio	protein_match	16384918	16385139	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 186 259
scaffold_6473	Scipio	protein_match	16387647	16387824	1.0	+	0	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 260 318
scaffold_6473	Scipio	protein_match	16388705	16388724	1.0	+	2	gene_id=kassiopeia_gene_id335474 GI15986 [Drosophila mojavensis];Query=GI15986%20[Drosophila%20mojavensis] 319 325
# protein sequence = [MELLQLLCYTFLLLLSRMLVLQAVSWEEWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRLMHI
# DKHRISGIISNTGHSVIFTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHIHYGLNDQFGSEHSVDGYTFPAEIQIFGYNSQLYANFSDALNRAQG
# IVGVSILLQLGDLSNPELRMLTDQLERIRYGGDEVFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHP
# KAPLGNNYRPPQPLLHRPIRTNIDFKTAKTKAACPTMYREVYYKATSWKQN]
#
##gff-version	3
##query	GI14439%20[Drosophila%20mojavensis] 1 1049
scaffold_6482	Scipio	protein_match	1524794	1524889	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 1 32
scaffold_6482	Scipio	protein_match	1525833	1525928	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 33 64
scaffold_6482	Scipio	protein_match	1526275	1526403	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 65 107
scaffold_6482	Scipio	protein_match	1526460	1526600	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 108 154
scaffold_6482	Scipio	protein_match	1526660	1526789	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 155 197
scaffold_6482	Scipio	protein_match	1526856	1526995	1.0	+	2	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 198 244
scaffold_6482	Scipio	protein_match	1527219	1527292	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 245 269
scaffold_6482	Scipio	protein_match	1528519	1528592	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 245 269
scaffold_6482	Scipio	protein_match	1529267	1529415	1.0	+	1	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 270 318
scaffold_6482	Scipio	protein_match	1529510	1530186	1.0	+	2	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 319 544
scaffold_6482	Scipio	protein_match	1530595	1531237	1.0	+	0	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 545 758
scaffold_6482	Scipio	protein_match	1531297	1531443	1.0	+	2	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 759 807
scaffold_6482	Scipio	protein_match	1531508	1531640	1.0	+	2	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 808 852
scaffold_6482	Scipio	protein_match	1531699	1532290	1.0	+	1	gene_id=kassiopeia_gene_id333975 GI14439 [Drosophila mojavensis];Query=GI14439%20[Drosophila%20mojavensis] 853 1049
# protein sequence = [MALKKVKGNFERMFDKNLTDLVRGIRNNKDNEAKYIAQCIEEIKQELRQDNINVKCNAVAKLTYIQMLGYDISWAGFN
# IIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLR
# YPEALRPAFPKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPVFFKLMTTSTNNWMLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMS
# LLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIVDSDQNLKYLGLLAMSKILKTHPKSVQTHKDLILACLDDKDESIRLRALDLLYGMVSKKN
# LMEIVKRLLGHMERAEGSAYRDELLYKVIEICAQSSYLYVTNFEWYMTVLVELIQLEAGSKHGRLIAEQLLDVAIRVPVVRQFAVNEMTNLLDTFAVS
# TQSNSMYEVLYAAAWIVGEFSNELADTERTLNILLRPRKLPGHIQGVYVQNVIKLFARLATTCLELQDMPGIVRLCDHVLEKLQHFNGSNDIEVQERA
# NSACMLIEMLRKQLTQQEDASTGSIPPMAIEIVQEMALLFAGELIPVAPKAQRKVPLPDGLDLDEWINAPPPDDASSTSSEHDKDELFVSAVHDGNDA
# TGGGGGGTGSHSGGKRRKSLELTPEQLERQRMARLIEQSNNPHYLKSTPNSASAAIGNSSNNSNADQYDNIDDIPITELPLDIEGVAALRVGITKRSD
# KYLKEQQEAAAHSKDAKKKHKKSKKSKKSKNKVAYNSSSESDAEPKTVHIVNTTLDMPEGVTLSDSEDKDGKYDPNDPHRALDIELDMAAFEAPARSS
# KTASASGKESVKAQIGSAASESIDPETGAMPSKKVKKSKEKARGEQKTCKAQAQSQPDSVPDLIDTGSSPCRTATDNGNNNNNTAPSHAEHSQHQKKK
# KREKRAHKSSKLMNDEATANTLGSTTIIDVGETSAAHPEGDVSAAVDAKAHKKKHKKDKSQHKEKRTHKSPASEYEQPMGISTPSKEIF]
#
##gff-version	3
##query	GI18459%20[Drosophila%20mojavensis] 1 666
scaffold_6496	Scipio	protein_match	23416524	23416580	1.0	-	0	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 1 19
scaffold_6496	Scipio	protein_match	23415948	23416007	1.0	-	0	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 1 20
scaffold_6496	Scipio	protein_match	23413753	23415162	1.0	-	0	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 20 489
scaffold_6496	Scipio	protein_match	23413484	23413686	1.0	-	0	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 490 557
scaffold_6496	Scipio	protein_match	23413272	23413422	1.0	-	1	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 558 607
scaffold_6496	Scipio	protein_match	23413024	23413200	1.0	-	0	gene_id=kassiopeia_gene_id337854 GI18459 [Drosophila mojavensis];Query=GI18459%20[Drosophila%20mojavensis] 608 666
# protein sequence = [MSGIMRAPSILAKTAFASMQRVATVAAAATQQRRSYHVTPGYQKAKSANPDAISKQYPIVDHEYDAIVVGAGGSGLRA
# AFGLVAEGFRTAVITKLFPTRSHTIAAQGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFG
# GQSLKFGKGGQAHRCCAVADRTGHSLLHTLYGQSLSYDCNYFVEYFALDLIFENDECRGVLALNLEDGSLHRFRAKNTVIATGGYGRAFFSCTSAHTC
# TGDGTALVARQGLPSEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSKGERFMERYAPVAKDLASRDVVSRSITIEVMEGRGVGPEKDHVFLQLHH
# LPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYRGQVLTIDENGKDKIVRGLYAAGEAACSSVHGANRLGANSLLDLVVFGRAC
# AKTIAEENKPGEKAPELKDNAGEFSVANLDKLRHANGSITTADLRLKMQRCMQNHAAVFRDGPILQKGVSEMKEIYKQFKDIKVIDKSLVWNSDLIET
# LELQNLLANAQMTIVGAEARKESRGAHAREDFKDRIDEYDYSKPLESQQKKPIDQHWRKHTLAWVCSDDGDVELKYRPVIDQTLDNEVETVPPAIRSY]
#
##gff-version	3
##query	GI18492%20[Drosophila%20mojavensis] 1 670
scaffold_6496	Scipio	protein_match	22483457	22483907	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 1 150
scaffold_6496	Scipio	protein_match	22475657	22476025	1.0	-	2	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 151 273
scaffold_6496	Scipio	protein_match	22475428	22475592	1.0	-	2	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 274 328
scaffold_6496	Scipio	protein_match	22473336	22473529	1.0	-	2	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 329 393
scaffold_6496	Scipio	protein_match	22450228	22450446	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 394 466
scaffold_6496	Scipio	protein_match	22447779	22447921	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 467 514
scaffold_6496	Scipio	protein_match	22446594	22446684	1.0	-	1	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 515 544
scaffold_6496	Scipio	protein_match	22446282	22446392	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 545 581
scaffold_6496	Scipio	protein_match	22445772	22445870	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 545 577
scaffold_6496	Scipio	protein_match	22441643	22441750	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 582 617
scaffold_6496	Scipio	protein_match	22441420	22441578	1.0	-	0	gene_id=kassiopeia_gene_id337887 GI18492 [Drosophila mojavensis];Query=GI18492%20[Drosophila%20mojavensis] 618 670
# protein sequence = [MAFIWRRRSTTIVKLVALMLAIWFCIAFLIYTDDTRRRATLQESSGFGASGNNGLNAGGGAGDPVALALKNGPISEEE
# VNAALNAFGGNRNDLEDVADRAAPQEADVPPTAKHKRVKVIPRQQNVESLHRNVAVRADEKTPQKLSLSKEDDKSFLDPPAANLEDSPGELGKPVILP
# KDMSPEMKKAVDDGWTKNAFNQYVSDLISVRRSLPDPRDAWCKDSALYLSNLPKTDVIICFHNEAWSVLIRTVHSVLDRSPPELIGEIILVDDFSDMP
# HLKKQLEDYFASYPKVKIVRGPQREGLIRARLLGAEYAKSPVITYLDSHCECAEGWLEPLLDRIARNSTTVVCPVIDVIDDTTLEFHYRDSSGVNVGG
# FDWNLQFSWHAVPEREKKRHNSTSEPVYSPTMAGGLFSIDRKFFERLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRTG
# VNVLKKNSVRLAEVWMDDYAKYYYQRIGMDKGDFGDVSERKKLREDLQCKSFKWYLDNVYPELFIPGDAVANGEMRNLGYGGRTCLDSPSGKRYLKKP
# VGLYPCHRQGGNQYWMFSKTGEIRRDQACLDYAGKDVILFGCHGSKGNQFWTYHENTKLLHHGSSGKCLAINESKDKLIMEECDASHLRQHWMLENYD
# SSKL]
#
##gff-version	3
##query	GI18715%20[Drosophila%20mojavensis] 1 1391
scaffold_6496	Scipio	protein_match	17142150	17142368	1.0	-	0	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 1 73
scaffold_6496	Scipio	protein_match	17141264	17141680	1.0	-	0	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 74 212
scaffold_6496	Scipio	protein_match	17141214	17141254	1.0	-	0	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 213 226
scaffold_6496	Scipio	protein_match	17141148	17141203	1.0	-	0	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 213 231
scaffold_6496	Scipio	protein_match	17140066	17141085	1.0	-	1	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 232 571
scaffold_6496	Scipio	protein_match	17138925	17139128	1.0	-	1	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 572 639
scaffold_6496	Scipio	protein_match	17138383	17138715	1.0	-	1	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 640 750
scaffold_6496	Scipio	protein_match	17135497	17137420	1.0	-	1	gene_id=kassiopeia_gene_id330201 GI18715 [Drosophila mojavensis];Query=GI18715%20[Drosophila%20mojavensis] 751 1391
# protein sequence = [MATLIPATGCNTASAQSSNVEATYEDMFKEITRKLYGEETGNGLHTLGTPVAQVATSGPTAVPEGEQRSFTNLQQIDR
# TAAPSIEYEATGAAGGGSGNNVATTQANVIQQQQQQQQQSESGNSVVVSASGSGASVVPAPSVAAVGSFKSEDHLSTAFGLAALMQNGFAAGQAGLLK
# AGEQQQRWAQETGAAEQQQPQLVQWTTGGKLQSYAQQQQQQQQQQQQHQSTPKSKKHRQEHSAELIYASPSTSANAAQNLAQSTPTSAPTNSSSSSGG
# GSSSGSGGGSRSKKSSQAQAAAAAAAANGVHIVKRYACTHCPYSTDRRDLYTRHENIHKDEKPFQCYACLKQFNRADHVKKHFLRMHRELQYDINKTR
# RHVPAGSGGGGSGSGVGSHHAGGRGNVTINATGVNIDNAFLEAQRHPTSTSMSIAETIEAVASAADMPLAQLKQEKLDDGSVLPLHVAAVMNSAQQPV
# ASSSSGSGSSSAAGSGLLKPKREKRFTCCYCPWSGADKWGLKRHLNTHTKPFVCLLCDYKAARSERLATHVLKVHNKRACSKCSYLADTQEEYQIHMS
# DVHPHDNRPARSSSSNNSGSNNNNNGGNNSNNNGSNNATHSQNLNVLRTIGNTLVANNQLNTFHNAGNAFGTSSGGGQTVGNVSGSGAVTIYTTTTNE
# GVSGGGGGGGGGGSSGNITGGPLQEIIVNPTSMVGWRLSANGSLIPPHDLLTGSLPNAATQKRGSERLFQYLEAEGSDPEDYARLLKMDAISRNTASV
# AQDFHKAGGVHELKIPANHQLLFNNKLPSQWTTREAAALLHSLSSMGGHHSSNSNSGSNINNNNSSSNGGNSNSSHSNIGQRQKFGAMRARQHSTGED
# DENTPSSASSSSYSGDEYNMSGASSPMKMSRHANSNGKSLRSSSEHEHESELKEQSNNNNNNKALMASAFLEAAAYEQTAIELLASKRKLKIEYDEDQ
# ENQQQQQLQLQQQQQQQQQQRVQLIKSSPAYKLNNNNNNHNNNNNNSHSYYKEKSHRNAVHHCPQDDKENNTSRSEATAAAAAAAAMATATAAAAAAA
# AVGTAAVAAVTSTPNSNNNNSNNTPFLTQMEYQNLNRIGTQFQNYVKDIINKYYAAETPLMLAAAAAALPTATTTGQQQLSPGKRRRLMSETEEYIEY
# LRNKEDITLTITPKVPTGSSNSNSSSAAPPKLTVAPASQPQSLLKRQLDLAAPRKSPKKPAVSQHTLNSNSSSCNSNINNSPNNSSATSASRKSLNHL
# ATLLPLLADAASKQEYLTAPLDFSKKSDAETARSSRKQAQPKKIRLSPEAVVAMLRDKHLNKLVHQRLGCASCTASRRRNGGGGISFNYHTLGSLALH
# RFWKHRALKVASRSCRQCSAQFERRYSLQLHRRLKHAKL]
#
##gff-version	3
##query	GI18752%20[Drosophila%20mojavensis] 1 915
scaffold_6496	Scipio	protein_match	16379274	16379714	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 1 147
scaffold_6496	Scipio	protein_match	16367198	16367293	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 148 179
scaffold_6496	Scipio	protein_match	16351907	16352036	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 180 222
scaffold_6496	Scipio	protein_match	16350894	16351171	1.0	-	2	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 223 315
scaffold_6496	Scipio	protein_match	16350112	16350216	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 316 350
scaffold_6496	Scipio	protein_match	16341332	16341474	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 351 398
scaffold_6496	Scipio	protein_match	16341097	16341149	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 399 415
scaffold_6496	Scipio	protein_match	16339554	16339609	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 399 416
scaffold_6496	Scipio	protein_match	16338029	16338155	1.0	-	2	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 417 459
scaffold_6496	Scipio	protein_match	16336850	16337014	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 460 514
scaffold_6496	Scipio	protein_match	16336566	16336797	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 515 591
scaffold_6496	Scipio	protein_match	16336418	16336497	1.0	-	0	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 592 618
scaffold_6496	Scipio	protein_match	16335656	16335694	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 619 631
scaffold_6496	Scipio	protein_match	16335153	16335355	1.0	-	1	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 632 698
scaffold_6496	Scipio	protein_match	16334449	16335098	1.0	-	2	gene_id=kassiopeia_gene_id338142 GI18752 [Drosophila mojavensis];Query=GI18752%20[Drosophila%20mojavensis] 699 915
# protein sequence = [MSPEQLHSVFHVDTHDAVPHYELVQLLHHSSHGGLQRKRRSLDERINGSNAPKPHHVKKDLSKNAYYSELKQQAATGS
# SKNQLLGDDISSIKAHNVSFSAFGNPVNLTLRATQGLFKGAPHELRMWSVGSESNATHGLDLQEILDEKHHKHEIGEVFQDEQNMAAILMRRHMETGD
# LIMEGSIGHDLVIKPLPHELSPNKEHAHHIVFKRAASAADDQLSDFAFMEPDDLLASEKLERLQRRQHRSRRSSGSSPDFEDLNDEDEGQLDTEAEPA
# EPQTSESRVRPRRQAPYVIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAA
# ALTDMGKYLFRERRLPVYDIAVAITKLDMCRRTSAFGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPP
# SYLGGPGAQRCRWEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPGTLLSLDAQCRRDRGTYACFKDERVCAQLFCF
# DAQTGYCVAYRPAAEGSACGNGYHCLDGRCSPLPSNIIPDYGNNYRLVYNISSSSNSNSNGARNNGAKEHNSNSNGNSNSNSNNNSVEGNKRQQQQQQ
# QQQQQHHLVDEENEANAGIEINEAIERQKRKFPTTTTTSTTTAAVRAAKATPTTTAATATTTKTKATSSIFDAYFKKFQALHLPTLDGAVTATTTSVS
# TSVSSTATKASSTQQQQPQQQQQQQQKQHQQQQQQNFDGSQFLKRTLNRSSNITNKNSSNKVSHNNSQQQQQQQQQQLTSPSYVTNYIGDNTNNLPTV
# LDNQPSTTTTTTTTIAIQQLEQQSTNGNTTTTTTTLRKPKIKTQKLIRRTRVM]
#
##gff-version	3
##query	GI18926%20[Drosophila%20mojavensis] 1 5175
scaffold_6496	Scipio	protein_match	13757140	13757193	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1 18
scaffold_6496	Scipio	protein_match	13754135	13754338	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 19 86
scaffold_6496	Scipio	protein_match	13753029	13753106	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 87 112
scaffold_6496	Scipio	protein_match	13752554	13752942	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 113 242
scaffold_6496	Scipio	protein_match	13751966	13752490	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 243 417
scaffold_6496	Scipio	protein_match	13751783	13751907	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 418 458
scaffold_6496	Scipio	protein_match	13750303	13751725	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 459 933
scaffold_6496	Scipio	protein_match	13749638	13750241	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 934 1134
scaffold_6496	Scipio	protein_match	13749335	13749469	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1135 1179
scaffold_6496	Scipio	protein_match	13748939	13749038	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1180 1212
scaffold_6496	Scipio	protein_match	13747697	13747901	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1213 1281
scaffold_6496	Scipio	protein_match	13746873	13747629	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1282 1533
scaffold_6496	Scipio	protein_match	13745648	13746807	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1534 1920
scaffold_6496	Scipio	protein_match	13745126	13745320	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1921 1985
scaffold_6496	Scipio	protein_match	13744942	13745057	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 1986 2023
scaffold_6496	Scipio	protein_match	13742584	13744856	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 2024 2781
scaffold_6496	Scipio	protein_match	13742038	13742517	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 2782 2941
scaffold_6496	Scipio	protein_match	13741755	13741892	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 2942 2987
scaffold_6496	Scipio	protein_match	13741294	13741580	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 2988 3083
scaffold_6496	Scipio	protein_match	13739130	13741227	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 3084 3782
scaffold_6496	Scipio	protein_match	13738704	13738816	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 3783 3820
scaffold_6496	Scipio	protein_match	13738162	13738271	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 3783 3819
scaffold_6496	Scipio	protein_match	13737451	13737799	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 3821 3936
scaffold_6496	Scipio	protein_match	13736887	13737187	1.0	-	0	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 3937 4036
scaffold_6496	Scipio	protein_match	13736430	13736540	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 4037 4073
scaffold_6496	Scipio	protein_match	13735948	13736367	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 4074 4213
scaffold_6496	Scipio	protein_match	13735685	13735886	1.0	-	2	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 4214 4281
scaffold_6496	Scipio	protein_match	13732936	13735618	1.0	-	1	gene_id=kassiopeia_gene_id338314 GI18926 [Drosophila mojavensis];Query=GI18926%20[Drosophila%20mojavensis] 4282 5175
# protein sequence = [MAEAEGGSEQDDVSFLRTEDMVTLSCTATGERVCLAAEGFGNRHCFLENIADKNVPPDLSQCVFVIEQALSVRALQEL
# VTAAGSETGKGTGSGHRTLLYGNAILLRHHNSDMYLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLH
# TTKENEQSIVNASFHVTHWSVQPYGTGISRMKYVGYVFGGDVLRFFHGGDECLTIPSTWGREAGQNIVIYEGGVVMAQARSLWRLELARTKWTGGFIN
# WYHPMRIRHITTGRYLGVNDSNELILVKKEEASIATTTFCLRQEKDDEKKVLEDKDLEVIGSPIIKYGDTTVIVQHCESSLWLSYKSYETKKKGVGKV
# EEKQAILHEEGKMDDCLDFSRSQEEESKTARVIRKCSSLFTQFITALETLQSNRRHSIFFQKVNLNEMVMCLEDLINYFSQPEDDMEHEEKQNRFRAL
# RNRQDLFQEEGVLNLILEAIDKINIITSQGFLASFLAGDETGQSWDLISTYLYQLLAAIIKGNHTNCAQFANSNRLNWLFSRLGSQASSEGSGMLDVL
# HCVLIDSPEALNMMRDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDFLLPGKNLLLQTLLVDHVASIRPNIFVGRVDGSSMYQKW
# YFEVTMDHIEQTTHIMPHLRIGWANTSGYVPYPGGGKKWGGNGVGDDLYSFGFDGAHLWTGGRKTLVADALPEEPYIRKGDVVGVAIDLSVPVITFTF
# NGNKVRGCFRDFNLDGMFFPVMSCSSKLSCRFLFGGDHGRLKYAPPAGFSALVQCLMPHQILSLDPCFYFGNLNKNVLAGPWLIEDDTAFVPKPVDTT
# GVTLPSSVDQIKEKLAENIHEMWALNKIDAGWTWGEQRDDYHRIHPCLTQFEKLPAAEKRYDNQLAVQTLKTIISLGYYITMDKPPARIRPVRLPNEI
# FMQANGYKPAPLDLSAVTLTPKLEELVDQLAENTHNLWARERIQQGWTYGLNEDSENHRSPHLVPYAKVDEAIKKANRDTASETVRTLLVYGYVLDPP
# TGEGTEALLAEAQRLKFAAFRTYRVERNYAVTSGKWYFEFEVLTAGPMRVGWARADCYPGAMLGSEDTSWAFDGHNVTKMHAGTIEHFGVRYEAGDVI
# GCFIDVKEQTISKDPSCTGNISNEEKVYGGNSESFGKQCGPGDIVGVFLDLADHTISFSLNGELLMDALGGETTFADVTAEGVGFVPACTLGVGQKAR
# LIYGQDVDSLKFFTTCGLQEGYEPFCVNMQRPVTHWYTKDQPIFENTEEMPDCRIDVTRIPGGADTPPHLKISHNTFETMEKANWEFLRLSLPVTCMS
# DFISEQEKARRWEEIKLRQYRLMREAQEAAIQMQTQNAAHMDHMLKSGFNMNDIKGLTRNFDDHTEAEAEHMMHGPPRPPRKGSLTRNITFESDMTAA
# LDEMQRSTSVLDMNGLGDDLDDKKKRGRSPFKFFSKKSRDQSREKNGSRTADTSLERRNTVAHGRNVVNQQMTTRTPTLRLNNAEIPPSPVPQGPKQL
# SSTNLGQPSVESSGNEMFDAECLKLINEYFYGVRIFPGQDPTHVYVGWVTTQYHLHSREFNKNKVRRASVYIEDYYEVPIERIDRQSCYVVRADELFN
# EVTQDASGKGASQGMFVGCFVDTATGIIRFTCEGKETSHRWMMEPDTKLFPAIFVEATSKEILQIELGRTPTTLPLSAAVLPTSDKHINPQSPPRLKV
# QCLRPHQWARVPNTSLQVHALKLSDIRGWSMLCEDPVSMLALHIPEEDRCIDILELIEMDKLLSFHAHTLTLYAALCYQSNYRAAHALCQHVDQKQLL
# YAIRSEYMSGPLRQGFYDLLIALHLESHATTMEVCKNEYITPLGPELKELYAEDEMRHSLRSLVTESVRPQLRMTEITPPVIATSSMPSVSSEPIPNI
# DQLYSPKFPLEVVREFVMEALKDAVEINQVHNRDPIGWTNENLFLPLIKLTDRLLLVGVLTDEDVQKLLVMVDPETWDPTFEREGKDEHRKGLLTMKM
# AEGAKLQMCYLLHHLYDTQLRHRVESIIAFSHDFVGDLQTDQLRRYIEIKQSDLPSAVAAKKTKEFRCPPREQMNQILCFKNLEADDQDNCTCGLELR
# SRLSEFHDSLMQKVSLNALQEPDGTETNAIEEIKTGPITKIYNFINTVKELEEGPKEVEEPEKKTPEEVFRKVLIKTIVSWAEESQIENPKLVREMFS
# LLVRQYDTVGELVRALEKTYVINNRARDDVAEMWVGLSQIRALLPVQMSQEEEELMRKRLWKLVNNATFFQHPDLIRILRVHENVMAVMMNTLGRRAQ
# AQSDAPAQTEGAEGVPSKEKDTSHEMVVACCRFLCYFCRTGRQNQKAMFDHFDFLLDNANILLARPSLRGSTPLDVAYSSLMENTELALALREHYLEK
# IAVYLSRCGLQSNSELVEKGYPDLGWDPVEGERYLDFLRYCVWVNGESVEENANLVIRLLIRRPECLGPALRGEGEGLFRAIVEANRMSERISDRCKM
# QDEAEGTIAGLNFTHPLPEGDEDEDYIDTGAAILNFYCTLVDLLGRCAPDVSVIEQGKNESLRARAILRSLVPLEDLQGVLSLKFTLTQTAPGEEKPK
# SDMPSGLLPNNKQSIVLFLERVYGIETQDLFYRLLEDAFLPDLRTATILDKSDGSESDMALAMNRYIGNSILPLLIKHSKFYNEAENYASLLDATLHT
# VYRLSKNRMLTKGQREAVSDFLVALTSQMQPAMLLKLLRKLTVDVSKLSEYTTVALRLLTLHFDRCAKYYGSTQGQGSYGASSDEEKRLTMLLFSNIF
# DSLSNMDYDPELFGKALPCLIAIGCALPPDYSLSKNTDEDYYGRQMGAPDQPQYVPNPIDTNNVHLDNDLNSLVQKFSEHYHDAWASRRLEGGWTYGE
# IRSDIERKHPRLKPYNMLSEYERERYRDPVRECLKGLLAIGWTVEHSEIDLPLNHRGSTRRQSKPQIHDFQNEGNPFNYNPHPVDMSNLTLSREMQNM
# AERLAENSHDIWAKKKNEELNGCGGVIHPQLVPYDLLTDKEKKKDRERSQEFLKYMQYQGYKLHKPSKGGAVEEGGATQAAVELRFSYSLLEKLIQYL
# DRATINMKLLKPSTTFSRRSSFKTASRDIKFFSKVVLPLMEKYFSTHRNYFIAIATATNNIGAASLKEKEMVASIFCKLAALLRNRLSAFGPDVRITV
# RCLQVLVKGIDAKTLTKNCPEFIRTSMLTFFNQTSDDLGNTIMNLQDGKYSHLRGTHLKTSTSLGYVNQVVLPVLTAMFDHLAACDYGSDLLLDEIQV
# ASYKILAALYHLGTDATLTHDRKYLKTEIERHRPALGSCLGAYSSCFPVAYLEPHLNKHNQYSLLNRIADHSLEAQDIMVKMESCMPNLEAILNEVDQ
# FVESDKTYADAPHIIDVILPLLCAYLPFWWSQGPDNVSPTSGNHVTMVTADHMNSLLRNVLKMIKKNIGNDNAPWMTRIAAYTQQIIINTSEELLKDP
# FLPLAERVKKRTENMLHKEDSMRGFIKSATDDTSQVETQLQEDWNLLVRDIYSFYPLLIKYVDLQRNHWLKDNIPEAEELYNHVAEIFNIWSKSQYFL
# KEEQNFISANEIDNMALIMPTATRRSAISEGVPAVGGKVKKKKKNRDKKRDKDKEVQASLMVACLKRLLPVGLNLFAGREQELVQHCKDRYLKKMNEY
# DVIEFARNQLTLPDKLDPSDEMSWQHYLYSKLGKTEEPVDEQALEKVNANSNEKGKDKTTETVDRIVAMAKVLFGLHMIDHPQQQSKNVYRSVVSIQR
# KRAVIACFRQTSLHSLPRHRACNIFARTYYEQWLQEENVGQEVMIEDLTQTFEESEKSKKDEEETDGKPDPLTQLVTTFCRGAMTERSGALQEDLLYM
# SYAQIAAKSCGEEEEEGGDEGEGGEGGEEGEGTSIHEQEMEKQKLLFHQARLSNRGVAEMVLLHISASKGIPSEMVMTTLNLGIAILRGGNIDIQMGM
# LNHLKEKKDVGFFTSIAGLMNSCSVLDLDAFERNTKAEGLGVGSEGAAGEKNMHDAEFTCALFRFIQLTCEGHNLEWQNYLRTQAGNTTTVNVVICTV
# DYLLRLQESIMDFYWHYSSKEIIDPAGKANFFKAIGVASQVFNTLTEVIQGPCTLNQQALAHSRLWDAVGGFLFLFSHMQDKLSKHSSQVDLLKELLN
# LQKDMITMMLSMLEGNVVNGTIGKQMVDTLVESASNVELILKYFDMFLKLADLIESPSFHEIDMKNEGWVIPKDFRDKMEQSKNYTPEEMDFLLACCE
# RNHEGKIDYRAFVERFHEPSKEIGFNLAVLLTNLSEHMPNEPRLARFLETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKPQIRESK
# RAFFYSIVTEGGDKEKLEAFVNFCEDAIFEMTHASGLMATDDGGGNVKRDTAYSSYMSEEEEERAARDPIRRTITAVKDGLKFGVHMLSPSNIKHQIG
# VMQTKSIPELIVGFFKIIFYMFYYTGYAHYCVVRYIFGILLNLMRGPAPEQEDEVAVVEEETFGRALPPLPLEEPPGPVQAFGLDINKEENGVYKVVV
# HESPASSSVEEGGESSPEDGAAPTGELVEGELHQEPISIVDMLGGEAAKKAAQERQEAQKAQEAAMASIEAEAKKSSAAPQETPAVHQIDFSQYTHRA
# VSFLARNFYNLKYVALVLAFSINFMLLFYKVTSFNEESEGSAEEELILGSGSGAGADMAGSGLGGSGDGSGDGDFEDDDIPELVHVDEDFFYMEHVLR
# IAALLHSLVSLAMLIAYYHLKVPLAIFKREKEIARRLEFDGLFIAEQPEDDDFKSHWDKLVISAKSFPVNYWDKFVKKKVRQKYSETYDFDSISNLLG
# MEKSAFTAQESEETGILRYIMNIDWRYQVWKAGVTFTDNSFLYSLWYFSFSVMGNFNNFFFAAHLLDVAVGFKTLRTILQSVTHNGKQLVLTVMLLTI
# IVYIYTVIAFNFFRKFYIQEEDEEVDKKCHDMLTCFVFHLYKGVRAGGGIGDEIGDPDGDDYEVYRIIFDITFFFFVIVILLAIIQGLIIDAFGELRD
# QLESVKDNMESNCFICGMGKDFFDIVPHGFDTHVQKEHNLANYMFFLMHLINKPDTEYTGQETYVWNMYQQRSWDFFPVGDCFRKQYEDELSGGGGGG
# G]
#
##gff-version	3
##query	GI18993%20[Drosophila%20mojavensis] 1 417
scaffold_6496	Scipio	protein_match	12837376	12837567	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 1 64
scaffold_6496	Scipio	protein_match	12837009	12837308	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 65 164
scaffold_6496	Scipio	protein_match	12836754	12836831	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 165 190
scaffold_6496	Scipio	protein_match	12836534	12836614	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 165 191
scaffold_6496	Scipio	protein_match	12836293	12836415	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 192 232
scaffold_6496	Scipio	protein_match	12836155	12836234	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 233 259
scaffold_6496	Scipio	protein_match	12835955	12836099	1.0	-	1	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 260 307
scaffold_6496	Scipio	protein_match	12835670	12835891	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 308 381
scaffold_6496	Scipio	protein_match	12835498	12835605	1.0	-	0	gene_id=kassiopeia_gene_id338381 GI18993 [Drosophila mojavensis];Query=GI18993%20[Drosophila%20mojavensis] 382 417
# protein sequence = [MGDHGFLSYVKRVIHSLVVSTPDRVTIERLKRDYANEEGCPVPYNSLGFKDIESFLRSIPDTVELVGYGPMAYVLAKS
# NAKTAHIQALVQCQKRPSSKQKNRKRGKPLFCYPSERSDIVFINEYHKSNNVLLNNYNNYNSYRMRYDSNSSANQYVKQPPPTQTSSNWTDHHLDYSS
# SDEGSESDAIPVFAVDQNVLSVEYPRDAVRFDYQLPKQNVHKKFKLEERVEVQLVTVASPHSFYFWLHDEDYEQYKGMSYSMQQFYSIINEYSYTIPL
# FLIMVGHLGAVHVREEIWHRVKVLNIKAGDRMNVELIDTGDRIWICHTDLKYLCKDFARLPPQCWPGRLACITPRQGKCFSMEASNYFYDIVCYRRLY
# AKIEKINDADNTCTMILVDPNSSLHTKNINMALIESGWVRRCYKP]
#
##gff-version	3
##query	GI19028%20[Drosophila%20mojavensis] 1 952
scaffold_6496	Scipio	protein_match	12095327	12095620	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 1 98
scaffold_6496	Scipio	protein_match	12095159	12095249	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 99 128
scaffold_6496	Scipio	protein_match	12088779	12088889	1.0	-	2	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 129 165
scaffold_6496	Scipio	protein_match	12087409	12087519	1.0	-	2	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 129 165
scaffold_6496	Scipio	protein_match	12086819	12086928	1.0	-	2	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 166 202
scaffold_6496	Scipio	protein_match	12082188	12082244	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 203 221
scaffold_6496	Scipio	protein_match	12081879	12082084	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 222 290
scaffold_6496	Scipio	protein_match	12081709	12081768	1.0	-	1	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 291 310
scaffold_6496	Scipio	protein_match	12081600	12081654	1.0	-	1	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 311 328
scaffold_6496	Scipio	protein_match	12081432	12081530	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 329 361
scaffold_6496	Scipio	protein_match	12081138	12081248	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 362 398
scaffold_6496	Scipio	protein_match	12080858	12081027	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 399 455
scaffold_6496	Scipio	protein_match	12080571	12080781	1.0	-	1	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 456 525
scaffold_6496	Scipio	protein_match	12078754	12078894	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 526 572
scaffold_6496	Scipio	protein_match	12078597	12078695	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 573 605
scaffold_6496	Scipio	protein_match	12078264	12078512	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 606 688
scaffold_6496	Scipio	protein_match	12077962	12078181	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 689 761
scaffold_6496	Scipio	protein_match	12077741	12077901	1.0	-	2	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 762 815
scaffold_6496	Scipio	protein_match	12077405	12077672	1.0	-	0	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 816 904
scaffold_6496	Scipio	protein_match	12077200	12077342	1.0	-	2	gene_id=kassiopeia_gene_id338415 GI19028 [Drosophila mojavensis];Query=GI19028%20[Drosophila%20mojavensis] 905 952
# protein sequence = [MCCSPSTLPNSSSAAGPGAGNGGNAPLPPLDANEKDGSLLFCIKLRRSRMRRCSCGAVTLQNQNGDGSTGSATCGDNM
# MCNQGLLNPLQTKNESDYEKLSTGKKDSIVTVAALGNFTHSVVRRATGTGTPPPPPPPTPATTTTTTTTTTHRASLTRPASESELLVGTGTSGTSSSG
# GGRPGHRKSSLALALTPEDDSMDVYQRNLMDLKYPTVLPPNPQLKALLVFHKSDSICEVVTLACQRHQLDVTLVKSKEEALETLHKSYATAQCYHLII
# IDARSTKGLDAEHIARTIRHTHGHHLTTIIAVCKKSFFEKDDALIALLDAGVNRCIAETTNLTLCSVELKQILHSIIRPHNVMSTQQALYTALHRLKE
# VVLITDDVLRIQYANRATERLLNMRLDEIISKPLGDIFVSDLSTISEQGKSIKEFDGILMVRRKNQESIPMHVRVVPVACIGSAPTHLIFNFDIPGGG
# MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIASDGLRRTSLAKLTSLPLEAPITKENCSADEARLIDKVLDFLKREGLYSPQMKELRTDDPIATDLIG
# ALLTGPSVYSSRRSSNDSIIRTGNSTRAATIVPAKMKANPIIMELLEESLKWDFDIFKLEEITDYHPLLYLGMEMFRRFDVFATLNIDENVCKAWLAV
# IEAHYHKSNTYHNSTHAADVMQATGAFITQLASKDMVMDRMDEATALIAAAAHDVDHPGRSSAFLCNSNNPLAILYNDLTVLESHHAAITFKLTLGDD
# KFNIFKNLDKETYKSARSTIIDMILATEMTRHFEHLAKFVSVFGSEVEPRELVQSEEETSILMRRMLIKVADVSNPARPMQYCIEWARRIAEEYFMQT
# DEEKQRHLPIVMPMFDRATCSIPKSQIGFIEYIIQDMMHAWDGFIDMPELITCMQINYSQWKKYDEQGINTLADIMAKQPPVGNKSSSSK]
#
##gff-version	3
##query	GI19047%20[Drosophila%20mojavensis] 1 867
scaffold_6496	Scipio	protein_match	11847999	11848019	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 1 7
scaffold_6496	Scipio	protein_match	11847258	11847934	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 8 233
scaffold_6496	Scipio	protein_match	11847105	11847189	1.0	-	1	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 234 261
scaffold_6496	Scipio	protein_match	11846919	11847039	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 262 301
scaffold_6496	Scipio	protein_match	11846706	11846860	1.0	-	2	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 302 353
scaffold_6496	Scipio	protein_match	11846256	11846639	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 354 481
scaffold_6496	Scipio	protein_match	11845826	11846191	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 482 603
scaffold_6496	Scipio	protein_match	11845620	11845766	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 604 652
scaffold_6496	Scipio	protein_match	11845050	11845550	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 653 819
scaffold_6496	Scipio	protein_match	11841349	11841495	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 604 652
scaffold_6496	Scipio	protein_match	11840797	11841282	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 653 814
scaffold_6496	Scipio	protein_match	11840568	11840726	1.0	-	0	gene_id=kassiopeia_gene_id338433 GI19047 [Drosophila mojavensis];Query=GI19047%20[Drosophila%20mojavensis] 815 867
# protein sequence = [MGDKDKLILAESAEALKNVDKRESSSKVPWYFANGFLLFWGLLFFAVVLPFFNKLPTPLTMEDAKRNVFIAERAYNNL
# YNLSNIGNKLTGSKENEVDAVNFLLSELAQIKANLQEDIFEMEIDVSKATGSYPYKTVLNMYRNVQSVVVKLSPKASNDENYLLVNSHYDSKPYTASA
# GDAGFMIVTMLEVLRVIASTKQTLEHPIVFLFNGAEENMMQASHGFVTQHKWASKCKVVVNLDAAGSGGREVLFQSGPSHPWLVNYYKKYVKHPFATT
# MAEEVFQLGIIPSDTDFRQFNTYGNIPGLDIAQITNGYVYHTKYDLSSIIPRGSLQNTGDNLLELVRGLANATELNDIEAYKTGHAVFFDFLGLYFVN
# YSEATGKSINFGVAGAVLIFIFISMWRMSAVSNASLCNVASWFILVIIVQIISFVLGLLLPIVVAYGMDALGLSLTYYSTPLLVVGLYVCPSLIGLSL
# PITLYYSVQRNEKISNAYHLQLALHSQAVILALLVLAATVYGLRTSYIFVIPLASYMISLAINLLTTLHDRGYAWTGVLKLSQVIPFLYSSYVIYTFV
# VVLTPMGARAGSASNRDLYIAVLAAVGTVLSFGFLIPVINAFRKPSFVVLSLFLVTAISLYLASSTQIGFPYRPKTSGQRVAYLQVRNMFYEYDGTLS
# KDESGYLFSFQDRREERPLLGTNVNLTGLVSIKSKCETEMMCGMPLYDYRFTKSRLQSKWLPRSEPIVPPEIRGLELLNKTILNATNVRFEFNLTGPS
# HMSLFIQPYDNVKISNWSFIPSYLNMPPPYHIYLTYGIDNSPYNFFVEASSLHGDLGFPLFQMGVSAHFIGNEGDAQSVKFASSFPSYSILAQWPALY
# KRYVF]
#
##gff-version	3
##query	GI19049%20[Drosophila%20mojavensis] 1 872
scaffold_6496	Scipio	protein_match	11835810	11835830	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 1 7
scaffold_6496	Scipio	protein_match	11835069	11835748	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 8 234
scaffold_6496	Scipio	protein_match	11834931	11835015	1.0	-	1	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 235 262
scaffold_6496	Scipio	protein_match	11830650	11830734	1.0	-	1	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 235 262
scaffold_6496	Scipio	protein_match	11830477	11830597	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 263 302
scaffold_6496	Scipio	protein_match	11830266	11830420	1.0	-	2	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 303 354
scaffold_6496	Scipio	protein_match	11829824	11830207	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 355 482
scaffold_6496	Scipio	protein_match	11829403	11829768	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 483 604
scaffold_6496	Scipio	protein_match	11829198	11829344	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 605 653
scaffold_6496	Scipio	protein_match	11828638	11829135	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 654 819
scaffold_6496	Scipio	protein_match	11828406	11828564	1.0	-	0	gene_id=kassiopeia_gene_id338435 GI19049 [Drosophila mojavensis];Query=GI19049%20[Drosophila%20mojavensis] 820 872
# protein sequence = [MGDKEKLLISESEETGSKILTNKKSTSKVPWYLATVFLLFWGLLFFAIVIPFYNRLPAARTLDDANKNVFIAERAYKN
# LYTLSNIGYKLTGSKENEIEAVQFLLNELADIKEASLNDLFDMEIDLSQASGSYPYKNLLNMYQGVQNIAVKLTPKNCTSETYLLVNSHFDSKPFTPS
# AGDAGFMIVTMLEVLRVISTTRETFQHPIVFLFNGAEEGMMEASHGFITQHKWAPKCKAVVNLDAGGSGGREILFQSGPNHAWIVNYYKNYVKYPFAT
# TLAEEIFQTGILPSDTDFRQFNIYGNIPGLDMGQCINGFRYHTIYDTIDAIPRGSLQNTGDNVLSVVRGLANAPELHDLRAHRNGHSVFFDFLGFYFI
# HYSETTAIYLNLGVAGAALILIFISMWRMTSVSNISLFHVSCWFTLVLVVQIISFVLGLLLPAVVAYVFDYLGLSLTYYSTPLLIIGLYVCPSLIGLS
# LPVTIYHMLQQNDKISNAYHLQLSLHAQAIILALLTIGATLFGLRSIYISVIPLIFYVLSLAFNLLTTLHDRGYAWTGVLKLSQVIPFLYSSYLFYTL
# VVILTPMGARAGSASNRDLYVAIVAALGTVLSFGFLVPLINSFRRPSLVIASLLAVTAVAMYLASSTQLGFPYRPRTNGQRVAYLQVRNKFYEYDGTL
# SKDESGYLFNFQDRLREKPFVDTNDNLTGLVSIKSLCEEHMMCGMPLFDYRYVQNRLESKWLARSAPIEPKSSTELELVSKTQVNATIVRFVFKLTGP
# SHMSLFIQPYEDAKIVNWSFSLNYLKYPPAYPLAFHIYFRYGIDSSPLTFCIEILKSDGDFNVPLFQLGVSGHYIGDKGDAESEEFAASFPSYSILAT
# WPVLYQRFIY]
#
##gff-version	3
##query	GI11284%20[Drosophila%20mojavensis] 1 114
scaffold_6496	Scipio	protein_match	11387971	11388280	0.947	-	0	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 1 103;Mismatches=39
scaffold_6496	Scipio	protein_match	11386189	11386214	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 112
scaffold_6496	Scipio	protein_match	11383532	11383560	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 113
scaffold_6496	Scipio	protein_match	11378727	11378767	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 117
scaffold_6496	Scipio	protein_match	11365586	11365629	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 118
scaffold_6496	Scipio	protein_match	11365152	11365204	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 121
scaffold_6496	Scipio	protein_match	11358584	11358624	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 117
scaffold_6496	Scipio	protein_match	11357353	11357396	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 118
scaffold_6496	Scipio	protein_match	11355824	11355867	0.947	-	2	gene_id=kassiopeia_gene_id330878 GI11284 [Drosophila mojavensis];Query=GI11284%20[Drosophila%20mojavensis] 104 114;Mismatches=113 114;Gap=M9 D4 M2
# protein sequence = [MRIFKLFRRRGSSFYLPLLLLLLVHCICMWPVLAARDRxARQNSKQRHQDAYRNNASRARNRGGGSGNHERAAAAAAA
# ASSAALIASGSSIGDNNKDTFPKGKTTTTTTTTT----xx]
#
##gff-version	3
##query	GI19089%20[Drosophila%20mojavensis] 1 2351
scaffold_6496	Scipio	protein_match	11237902	11238052	1.0	-	0	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 1 50
scaffold_6496	Scipio	protein_match	11237217	11237367	1.0	-	0	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 1 50
scaffold_6496	Scipio	protein_match	11233936	11237084	1.0	-	2	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 51 1100
scaffold_6496	Scipio	protein_match	11230937	11233872	1.0	-	0	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 1101 2079
scaffold_6496	Scipio	protein_match	11230535	11230872	1.0	-	1	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 2080 2191
scaffold_6496	Scipio	protein_match	11230341	11230471	1.0	-	2	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 2192 2235
scaffold_6496	Scipio	protein_match	11229923	11230270	1.0	-	0	gene_id=kassiopeia_gene_id338473 GI19089 [Drosophila mojavensis];Query=GI19089%20[Drosophila%20mojavensis] 2236 2351
# protein sequence = [MDFDGTQSLSNILQPEELQLVPDNVQVKLTAFIEKFSDEYCKERAAANRLAETEQKNEELQSQLLDNQVKFTNFEQNV
# AELRNQLDQVSAERDQLLESVKNYDQNLTTLRKEKVSFVDERDSLLKVIERQNGELERLKQDLQTYQQQLRAAITAKCEAIARLDEVQSKEVSLDIKE
# RRLESERAMLQNEIQVLSSDLNRNNAELQNLRRDHAMNTMHLEVRLKEKCDELQIVQNQNAQYSKTIEDLNKKIEDLNETMFQHNMATEKFVDKLKKE
# LDSKEKLVEIYKSTESENVAERNELLKGISDLKRMLTDTTDQYGELEAEFQLAKQTHAEELNEKNATIESLRTEIAHANDLLKEAQEQSLESAICKLA
# PTAAVASRLMRSDMSLTELYSLYAKNSEELEAKNRENAQLKLQIKSIVDEINERAPVFKKQDEDYSKLTEEHQLVLQQRDELVDKKLALEQELEQAQF
# DVTRHVKENKKLKQSQVDLSRQVCLLLDELNCLRAGVNRSRSQTPHGAVHNSSDAISRDLVTFESIVELQEQNVKLLALIRELTSELEANEQKNDELQ
# LKAYEEKFEKATKRLVEMEESLNQKNNTISTLIAKCERYKKFYFDAQKKLGSQIIDLDDSTVLIDESQSEQAKTVEKTQQLEAEAKLERRIRSLEQQL
# DDEAKKYAALKENYDYYTSEKRKNDALVQDQFDSMRKEVRELTSINCKLMNASEFQKEQMELLHKGIATYKQQIAALEDRTKNYEKTIIKHEQTVHML
# KDEVMSAHRKQVASETEAHSLRHENRILKETTARLQAEKEGYNREHQSQALLLNNLEFIKANLERSETEGRLRLEQRLDDTVRELSAQRRHFQEEEEK
# FRETVNEFKRQAETANKLKEEERLQAEKWHQELLGVREELAAKVNQVNELSKKLQESLTPSKDENPITAANKKAREFELRYEQARIEIESLSKELAKA
# REHGDQFYKMSQSAESEIKRLHEMHAETVAKSDAEIKKLKSSEAELQTRVTDLEAELLLANVTEQSKSTNQSDQLKTTQEELKTVLEKLTESGRTIRN
# LRTENSTLAESLNSVEVKYANEMMLHSADIQELTKFKADFLKMQDELNQLKCGREALQAAHDELKKANSEAQGLLQKEKEESEKRVADLNALNSSLHD
# QIEALTTKLAALAKSASNQNALNDSLLDSSSTLDLNSSSALDDVKNSEQLLKIIKFLRKEKDLYAAKLDILKAENARLVSEHTILQKKVDELNGYLKQ
# ERSKSETDVVSAAKHEAVLRKIETLNAITDSNRILREERNTLTKRVSELTERISSLEKELFPLQCSNKELTSKIEELNVENTSLRTEAIKWRQRANAL
# VEKSNRNPEEFKRLQGEREHLAKLLTAEKEASKKQSDELAALKARLDNELPALNKLLQLQDESRKKQMEEANALKQANTRHAQDIMELKNRLLQKEEE
# LLKAQEELESKDKTIQDKESKELMLRKLAKRYKDYYTGLQAQTGGTDTVAELEKVRSELDELNNTMRSTKEQHEQLQKEYDDLKSRSNMDQDGGEAKQ
# KIEHLLQELTVTKTELANQETTFAGTKTSYDETVQRLEKELQEHIASNKDINARLTRENESLHMRINQLQRQLGSQQSTKPSTSSVGMVEKGNISESS
# PRTANVKPMSGSATVQQSATVTPWRGGETPLASIRPISVQNSRTAAILPTSQQPGASTSTSTSTSTSSAAAASGSSSSSSSSSSAVGNTALVPPQQQV
# HTTGSATLESMASSSPTSSHTDYMPSTSSAAVAVAAIPPMGATAAAESSQEAESVQHPQQNDGQLFAGGTQQQVVALVSPRVEGSSSSSSSSTTTSTS
# TQNPTVPSVQEASIQQQPSTSGSSSSSSTVVSSHSRHTPSSSNVTTTQAGCSKRPRDVEGDSSTNAEEGVPEKIVKLAKRLRAPMHGGELSAGHIGDS
# GMDVDQMPTSSQRDQEDDIQVEDSDDEEEDVLGPIDGGDAEQEEGYEDSYEQDNEMEDNADAPDQHNEVDIEQVQMQAQAEGQLLEDSPATVSTQENN
# QSQAITSGSGESNALQLPQAEANWKQQAPSTSSAAARRTESSVEIVSSPQVSNFSEQTTCVEAEVDGTAVAEAAAAEDESAGTSVDCTAALASSPQKP
# NEAAEQSTSSQAAEAKDKSDESETAGAENVSEADEAFAEETAPGQAEDSQQQSNENPNVGTSQSVETDNPDNQAEGPSEENEGADGVSSEGEKQAVEV
# EEEGREAEATSPSENTRFRTLRSTVPTRRGGRSLMRGGNSNNNNNNNNANRPARIVWQRDSQPGNMRGGHPGNQDPNMPSGSPNTNRMFANRSRGRRP
# MRRPGPNNFNAGGGPGGYP]
#
##gff-version	3
##query	GI19157%20[Drosophila%20mojavensis] 1 590
scaffold_6496	Scipio	protein_match	10524581	10524905	1.0	-	0	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 1 108
scaffold_6496	Scipio	protein_match	10517179	10517536	1.0	-	2	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 109 228
scaffold_6496	Scipio	protein_match	10515915	10516241	1.0	-	1	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 229 337
scaffold_6496	Scipio	protein_match	10515518	10515779	1.0	-	1	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 338 424
scaffold_6496	Scipio	protein_match	10515056	10515317	1.0	-	1	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 338 424
scaffold_6496	Scipio	protein_match	10513043	10513141	1.0	-	0	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 425 457
scaffold_6496	Scipio	protein_match	10512856	10512981	1.0	-	0	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 458 499
scaffold_6496	Scipio	protein_match	10512640	10512784	1.0	-	0	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 500 547
scaffold_6496	Scipio	protein_match	10512395	10512522	1.0	-	2	gene_id=kassiopeia_gene_id338540 GI19157 [Drosophila mojavensis];Query=GI19157%20[Drosophila%20mojavensis] 548 590
# protein sequence = [MSLKNQQAYQPLPSAVAAMDNPAMSNSSSSSGSNDDVAELVQSGLPATYSSQQLVSSDSDSMERQHLRGANIVPEPRS
# RPGISRKQWFAVSVLCFVNLINYMDRFTIAGVLTDVKKTFAIDNDSAGLLQTVFVLSYMVFAPLFGYMGDRYSRRWLMVVGVALWSTTTLFGSFMQTF
# AGFITFRALVGIGEASYSTIAPTIISDLFVDSMRSKMLALFYFAIPVGSGLGYIVGSKTAELANDWRWALRVTPVLGVTAVVLLSMLKDPKRGESEGV
# EQVERASFCVELKDLMKNRSFVLSTAGFTCVAFVTGALAWWGPNYIHLGLKMQPGNENLKQEDISYKFGLVAMAAGLIGVPLGSALAQYYRTRIANCD
# PYICGIGLFISAPMVFIGLVMARSNGTLCFLFVFLAQVALNLCWSIVADILLYVVVPMRRSTAEAVQILASHALGDAGSPYLVGAISTAIKNKMLAQS
# RTVDSDVLKSMSQLAENATEIVTETLRARSAEDVYTFESLQYSLFSTTFVEVLGGVFFLITACYIVKDKSRATASVLADNDLRLAPDNELSLAPNPTY
# SKTLFDAEYLANYTDIALRERA]
#
##gff-version	3
##query	GI19181%20[Drosophila%20mojavensis] 1 121
scaffold_6496	Scipio	protein_match	10193752	10193969	1.0	-	0	gene_id=kassiopeia_gene_id338564 GI19181 [Drosophila mojavensis];Query=GI19181%20[Drosophila%20mojavensis] 1 73
scaffold_6496	Scipio	protein_match	10192808	10192952	1.0	-	1	gene_id=kassiopeia_gene_id338564 GI19181 [Drosophila mojavensis];Query=GI19181%20[Drosophila%20mojavensis] 74 121
scaffold_6496	Scipio	protein_match	10192502	10192646	1.0	-	1	gene_id=kassiopeia_gene_id338564 GI19181 [Drosophila mojavensis];Query=GI19181%20[Drosophila%20mojavensis] 74 121
# protein sequence = [MCSRNIKISVVLFLVLIPILTALPHNHNLSKRSNFFDLECKGIFNKTMFFRLDRICEDCYQLFRETSIHRLCKKDCFD
# SKWFGECVKVLLTPTEEITNLQHFIKVVNGSPISFNMAPGPAT]
#
##gff-version	3
##query	GI19187%20[Drosophila%20mojavensis] 1 462
scaffold_6496	Scipio	protein_match	10152145	10152189	1.0	-	0	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 1 15
scaffold_6496	Scipio	protein_match	10151563	10151607	1.0	-	0	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 1 15
scaffold_6496	Scipio	protein_match	10151003	10151051	1.0	-	0	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 16 31
scaffold_6496	Scipio	protein_match	10146058	10146298	1.0	-	2	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 32 112
scaffold_6496	Scipio	protein_match	10145887	10145953	1.0	-	1	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 113 134
scaffold_6496	Scipio	protein_match	10140655	10141124	1.0	-	0	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 135 291
scaffold_6496	Scipio	protein_match	10140263	10140581	1.0	-	1	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 292 397
scaffold_6496	Scipio	protein_match	10139921	10140115	1.0	-	0	gene_id=kassiopeia_gene_id338569 GI19187 [Drosophila mojavensis];Query=GI19187%20[Drosophila%20mojavensis] 398 462
# protein sequence = [MKASTRILCTALHLITIAALTTHGAQIPTPEKDAPGTLNAAIAAAEAEAAAQDATPTAKPGSVAPNVRVQCQSGSMLI
# TIKDAPPNHETGLFSGMIYPKGLSKNSSCLSEYRDHIGALRYRLPLRSCNTMPKERDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYMSRDAAVKP
# KKHKVVHKPQAYRSDEHDRRDYGRSLDKQQLDELEDDDDDVYDVDATDNNELPMPGCHMKIYNDQHKIADDVKIGDPLTIVISIDKQELYGLHVTDCI
# VRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTADRLAANVTFPAHKFPYTTSVYYQCNVRLCALQDPSCQEAPVCTGKRPKRQTTADGKDDEALPATIE
# VFSGLYVNENENANDSDEDAVYKEKTLEDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMARRSTKTVSNSGSSIYSGPYTNTAFSHSS]
#
##gff-version	3
##query	GI19290%20[Drosophila%20mojavensis] 1 372
scaffold_6496	Scipio	protein_match	8371047	8371094	1.0	-	0	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 1 16
scaffold_6496	Scipio	protein_match	8370506	8370553	1.0	-	0	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 1 16
scaffold_6496	Scipio	protein_match	8368190	8368566	1.0	-	0	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 17 142
scaffold_6496	Scipio	protein_match	8368036	8368115	1.0	-	1	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 143 168
scaffold_6496	Scipio	protein_match	8367491	8367817	1.0	-	2	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 169 277
scaffold_6496	Scipio	protein_match	8367351	8367427	1.0	-	2	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 278 303
scaffold_6496	Scipio	protein_match	8367124	8367289	1.0	-	0	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 304 358
scaffold_6496	Scipio	protein_match	8367018	8367058	1.0	-	2	gene_id=kassiopeia_gene_id338671 GI19290 [Drosophila mojavensis];Query=GI19290%20[Drosophila%20mojavensis] 359 372
# protein sequence = [MEKRIELERRARKANQILELNLDNCRSTSIVGLTDEYTALETLSLINVGLTTLKGFPKLPNLKKLELSDNRISSGLHY
# LTTSPKLQYLNLSGNKIKDLETLKPLKEFKNLNILDLFNNDATQVENYREKIFKMLPSLNFLDGFDCNDEEVQSEGDDDDEVNGNDSEDEDEPSAFCV
# NGLEIDLDELDALEQRVKAKKRLQEMQIQKQKPPDAENDEVDELDEYLKELQIKEKAKLESQSVIEASHLTVQPNNNQSNTNFAILIYWFLAILNLAN
# AAYFSGGDDDEEDSDESEDGENGDVSLSEVYNDDLEEDNSDWEEGEGGDEDEDEDSDIDEADGDPNESAASVNNAKDEKDAEKPDETHARGKKRKHDG]
#
##gff-version	3
##query	GI19334%20[Drosophila%20mojavensis] 1 354
scaffold_6496	Scipio	protein_match	7480254	7480371	1.0	-	0	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 1 39
scaffold_6496	Scipio	protein_match	7471154	7471271	1.0	-	0	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 1 39
scaffold_6496	Scipio	protein_match	7465944	7466128	1.0	-	2	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 40 101
scaffold_6496	Scipio	protein_match	7465697	7465857	1.0	-	0	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 102 155
scaffold_6496	Scipio	protein_match	7446674	7446802	1.0	-	1	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 156 198
scaffold_6496	Scipio	protein_match	7446109	7446238	1.0	-	1	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 199 241
scaffold_6496	Scipio	protein_match	7445871	7446024	1.0	-	0	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 242 292
scaffold_6496	Scipio	protein_match	7445618	7445802	1.0	-	2	gene_id=kassiopeia_gene_id338714 GI19334 [Drosophila mojavensis];Query=GI19334%20[Drosophila%20mojavensis] 293 354
# protein sequence = [MGCTTSAEERAAIQRSKQIEKNLKEDGIQAAKDIKLLLLGAGESGKSTIVKQMKIIHESGFTAEDFKQYRPVVYSNTI
# QSLVAILRAMPNLSIQYSNNERESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWLDAGVQECFSRSNEYQLNDSAKYFLDDLDRLGAKDYQPTEQDIL
# RTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDL
# FEEKIRKSPLTICFPEYTGGQEYGEAAAYIQAQFEAKNKSTSKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLY]
#
##gff-version	3
##query	GI19548%20[Drosophila%20mojavensis] 1 217
scaffold_6496	Scipio	protein_match	4002725	4002973	1.0	-	0	gene_id=kassiopeia_gene_id338925 GI19548 [Drosophila mojavensis];Query=GI19548%20[Drosophila%20mojavensis] 1 83
scaffold_6496	Scipio	protein_match	4002588	4002648	1.0	-	0	gene_id=kassiopeia_gene_id338925 GI19548 [Drosophila mojavensis];Query=GI19548%20[Drosophila%20mojavensis] 84 103
scaffold_6496	Scipio	protein_match	3999925	3999994	1.0	-	0	gene_id=kassiopeia_gene_id338925 GI19548 [Drosophila mojavensis];Query=GI19548%20[Drosophila%20mojavensis] 84 106
scaffold_6496	Scipio	protein_match	3999331	3999671	1.0	-	2	gene_id=kassiopeia_gene_id338925 GI19548 [Drosophila mojavensis];Query=GI19548%20[Drosophila%20mojavensis] 104 217
# protein sequence = [MTPATPSTAVTASVASTTTATIQSSMNSSYNDNSTLAPFPNGNSGDYPYYYPQPDYVYFYSGYTFYIVLLVLFVMLMP
# LAFIVSSTQRKRRENERRLILQRQRARREMEISVTNNNTNMGNGSVCLEVDNNDMTILPKGMDLPPSYDELNICNKDGNLGASTLTITTDLGCSNPNL
# IAAAALNEPPPHYQGTIDIVEAPTTATTISTTTVVSVAPRI]
#
##gff-version	3
##query	GI19599%20[Drosophila%20mojavensis] 1 442
scaffold_6496	Scipio	protein_match	3181608	3181643	1.0	-	0	gene_id=kassiopeia_gene_id338976 GI19599 [Drosophila mojavensis];Query=GI19599%20[Drosophila%20mojavensis] 1 12
scaffold_6496	Scipio	protein_match	3180471	3181544	1.0	-	0	gene_id=kassiopeia_gene_id338976 GI19599 [Drosophila mojavensis];Query=GI19599%20[Drosophila%20mojavensis] 13 370
scaffold_6496	Scipio	protein_match	3179145	3179360	1.0	-	0	gene_id=kassiopeia_gene_id338976 GI19599 [Drosophila mojavensis];Query=GI19599%20[Drosophila%20mojavensis] 371 442
scaffold_6496	Scipio	protein_match	3175492	3176565	1.0	-	0	gene_id=kassiopeia_gene_id338976 GI19599 [Drosophila mojavensis];Query=GI19599%20[Drosophila%20mojavensis] 13 370
scaffold_6496	Scipio	protein_match	3174308	3174523	1.0	-	0	gene_id=kassiopeia_gene_id338976 GI19599 [Drosophila mojavensis];Query=GI19599%20[Drosophila%20mojavensis] 371 442
# protein sequence = [MTDAATSNPDFPEYDWSEAQKSYILSSFYWGYIVTQFPAGFLVRRYGAKLVLFIPTFATALLSCLTPVCISWGGWLAF
# SVLRLIIGLFQGLIFPCIHEHLAKWSPPKDRNRLGVFAYSGSDCGSVMAMAISGLIAESSLGWPGISYVSAGLCGIWCILWLLLAADNAPRSRLIGGD
# ERDYIERSMRRNDGFHDQKIAIPWRAIWTSAPFYALLVVRSAQGWANSTMQLQTPAYMHGVLEMDIKSNALYSALPFLAMWCMSYVYLAIADLIMARK
# WLSLTTLRKSINTISYWGPAAALIGIGFLDKSQAGLAIALMAINAGLNAGSGIGNMLTIIDMSPNHSGILMAITNCATNIPPLLSPLLVGVIVTEPSS
# RAQWQIVFALTAIVFFIGNLVYIIWGTTDQQPWDAADFLKPRDAEQQQQQQAATGAMENQIEKRKGNLSK]
#
##gff-version	3
##query	GI19635%20[Drosophila%20mojavensis] 1 678
scaffold_6496	Scipio	protein_match	2272903	2272982	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 1 27
scaffold_6496	Scipio	protein_match	2241598	2241668	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 1 24
scaffold_6496	Scipio	protein_match	2232090	2232252	1.0	-	1	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 28 81
scaffold_6496	Scipio	protein_match	2224620	2224691	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 82 105
scaffold_6496	Scipio	protein_match	2211720	2211772	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 106 123
scaffold_6496	Scipio	protein_match	2209198	2209267	1.0	-	1	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 124 146
scaffold_6496	Scipio	protein_match	2206240	2206785	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 147 328
scaffold_6496	Scipio	protein_match	2205414	2206178	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 329 583
scaffold_6496	Scipio	protein_match	2205071	2205355	1.0	-	0	gene_id=kassiopeia_gene_id339010 GI19635 [Drosophila mojavensis];Query=GI19635%20[Drosophila%20mojavensis] 584 678
# protein sequence = [MEAFVWVFDSDDDADSDSETNSRLELGQNEKDCDEDDKDDVHDIMPPANYIQISQGKIQLVHQARSLEHEPALSLERA
# SDKDLLLERRMIEIEGALLRLQEQFQKSQCGSPTFEKELREQIENMNRIMKSKERKQLQTCRDHKALQTRFARQESLLHTMQQENRALLTRIRQYEHC
# LDDVMRKVVDAIVAEDNLREEVSMLKSRVRDLEAQNAALSASPVKGRDEGYCTMSSGQPQPSNGHLEGLPEEPEQWLLPAEPCSTEMEDWSMSQEELA
# VITFDDERDRQQLQLQRRKREHDWLWPSSDFINSTTVETDDSVADGIAQLLQQKLVYSEDEEVACTDFTNDFYKLVNIRPNSSRSLFSYLEGETDDED
# DEDEEDEQDSSMSESQIKQRVSPTPSEAGRAQLTSCSSSETDEHSVAPPPPLQPEAEAAHAEEEEEEHDYAVIEECRRRVSDIEIEDVPLVKNSSPAL
# NEQQCIAQIIKTELRRPPHVLVKSKSVLEEQEPSCILRHNQRRELESSVVRSDSISCAMMAKMAKETPPSPAMVSKLKERLLQRHAPNPTGNSWRRSN
# GWKRVTSPVAGSAKKEATKTTTELPKSCQQKAPPTRIPTCIHTTSTTSSTSSSCSSSTPSSPSPPKQTQKLTQQQQQQQKQQAKQTPQQPSQQRKSKI
# PPPVPVRRSYAS]
#
##gff-version	3
##query	GI19722%20[Drosophila%20mojavensis] 1 442
scaffold_6496	Scipio	protein_match	907879	908156	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 1 93
scaffold_6496	Scipio	protein_match	907518	907796	1.0	-	1	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 94 186
scaffold_6496	Scipio	protein_match	907364	907457	1.0	-	1	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 187 217
scaffold_6496	Scipio	protein_match	907105	907296	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 218 281
scaffold_6496	Scipio	protein_match	906830	907048	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 282 354
scaffold_6496	Scipio	protein_match	904771	904962	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 218 281
scaffold_6496	Scipio	protein_match	904480	904698	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 282 354
scaffold_6496	Scipio	protein_match	904161	904424	1.0	-	0	gene_id=kassiopeia_gene_id339096 GI19722 [Drosophila mojavensis];Query=GI19722%20[Drosophila%20mojavensis] 355 442
# protein sequence = [MEVCKESAIHGMPYLARKDLHFLERIFWLAMIIASTYYAVNSCIAQWQRYKDNPIIYEYEYMFALRSFPYAGATVCTH
# YYQLPSSITHKLVVDETGIDDESMQYYVKFLHVLHRLQYDNLETLIPYENDTTLQNLPYVRVLRKLLKNTLPKQQEVPELVSSLTEMGLCLTTSQLAS
# FGFTLQKHVEQNLTVPVRMCTYFDNCRTQIKPAVSGTLVTLFIHDVYEFLMPNDRRTVSINMDTINSYEITLILNSFSAETDVRNVPIAYRKCRYIDE
# NNLKYYAPYHPSLCRMECRINRALALCHCKPFFYVEGPKDRICSVSQMVCLARKKWLEQPCDCMPLCKEISFIVTEKVDSNGGGAENSQNFDRKFILN
# QELPKMGIKRRVVFSMDQLIVSFGGAIGLFLGASFMTIYGLSYLLMYYLIVKCKYRPKLKRDQNSSIKIA]
#
##gff-version	3
##query	GI19773%20[Drosophila%20mojavensis] 1 1376
scaffold_6496	Scipio	protein_match	366990	367085	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 1 32
scaffold_6496	Scipio	protein_match	372423	374052	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 33 575
scaffold_6496	Scipio	protein_match	374141	375758	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 33 571
scaffold_6496	Scipio	protein_match	375858	376156	1.0	+	2	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 576 675
scaffold_6496	Scipio	protein_match	377860	378083	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 676 750
scaffold_6496	Scipio	protein_match	378137	378305	1.0	+	1	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 751 806
scaffold_6496	Scipio	protein_match	378380	378550	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 807 863
scaffold_6496	Scipio	protein_match	378916	379263	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 864 979
scaffold_6496	Scipio	protein_match	379335	379667	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 980 1090
scaffold_6496	Scipio	protein_match	379741	380497	1.0	+	0	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 1091 1342
scaffold_6496	Scipio	protein_match	380528	380628	1.0	+	2	gene_id=kassiopeia_gene_id339147 GI19773 [Drosophila mojavensis];Query=GI19773%20[Drosophila%20mojavensis] 1343 1376
# protein sequence = [MLESPKFIENDCYDGSRIFSWLADMVGLSVDLPTIADKKQLRPSCNNVADGYHLADPTRCAGYYICTRGRPVHHSCHL
# GQSFDEDSKSCKTSSQVNCFNFRGLALRIHLGADAGAPDSEQPCSTTTPCVTTTPPCETTTPPCVTTTPPCETTTPPCVTTTPPCETTTPPCETTTPP
# CESTTPPCETTTPPCETTTPPCETTTPPCLTTTPPCETTTPPCVTTTAPCETTTPPCVTTTPPCETTTPPCETTTPPCETTTPPCETTTPPCETTTPP
# CETTTPPCETTTPPCETTTPPCETTTPPCVTTTPPCETTTPPCLTTTPPCETTTPPCVTTTPPCETTTPPCVTTTAPCETTTPPCVTTTPPCETTTPP
# CETTTPPCETTTPPCETTTPPCETTTPPCETTTSPCETTTPPCETTTPPCVTTTPPCETTTPPCETTTPPCETTTPPCETTTPPCVTTTPPCETTTPP
# CLTTTPPCETTTPPCVTTTPPCETTTPPCVTTTAPCETTTPPCVTTTPPCETTTPPCETTTPPCETTTPPCETTTPPCETTTPPCETTTPPCETTTPP
# CVTTTPPSTTTKGRKQNVSSVTNSPVSGAKKVLSGSQKALTGAKKALLNLVSTSTEDCEQRADGIFLQDANHCRRFYQCRGGKRVVRRCKSGNWFDIQ
# AGKCRRRNQVNFLVCQISALFLASLFRSWLHPSKVSYEVRHVFALSLGLAFGYFCFGQQAIHIAGLPAICFIVIRTQDPRIVQRSVLLVAMGYLLCVH
# LMRQIYDYGSYALDITGPLMIITQKVTSLAFSIHDGFVRKDEDMTKAQQYHAIRKMPSALEYFSYVWHFQSLMAGPLVFYKDYIEFVEGCNLLKRPTS
# NATLDNGRSELVVEPSPTKTVIRKVLGSMVCAFIFMKFVKIYPVKNMKEDDFIDGNSIPYKMWYAMMATTCIRFKYYHAWLLADAICNNSGLGFTGYD
# KDGNAKWDLISNINVLSFEFASNMRDAINNWNCGTNRWLRTLVYERVPKKYGTLLTFALSAVWHGFYPGYYLTFATGALMVTAGRTARRMLRYRFQST
# QFTRMFYDILTCITTRIVMGYTTFPFVMLEFMGSIKLYLRFYLCLHIISLVTIFILPRFIRGEQRARRSNGTEVTADSDRSGQVAVATQPLLAAQNDL
# KAGQDVAAPDQLQLDKHTKCNDKIPQQHQQQQQQQQQPNSQPLILQPRPQQQQQHSQKIQPPPLTLNVTSARDAVSVPHDQCEMDQLSSKLKEKIEAE
# TKNIEEFIDKTVTETVSGIVEFKNDLMRDIEFPKLKLAAGQVTSSAVNLVDAAAAGLRKRNISHDNNPNNSNSSNAQSDQEDNNSSSNSGGGVFLKKE
# MDVINAVVQQANVLPAVLSNGHAK]
#
##gff-version	3
##query	GI19779%20[Drosophila%20mojavensis] 1 2621
scaffold_6496	Scipio	protein_match	615894	615924	1.0	+	0	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 1 10
scaffold_6496	Scipio	protein_match	638356	638412	1.0	+	2	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 11 29
scaffold_6496	Scipio	protein_match	654315	654374	1.0	+	2	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 11 30
scaffold_6496	Scipio	protein_match	659243	660867	1.0	+	2	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 30 571
scaffold_6496	Scipio	protein_match	661108	661475	1.0	+	0	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 572 694
scaffold_6496	Scipio	protein_match	661659	661746	1.0	+	1	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 695 723
scaffold_6496	Scipio	protein_match	661821	661928	1.0	+	0	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 724 759
scaffold_6496	Scipio	protein_match	662019	665256	1.0	+	0	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 760 1837;Gap=M826 D1 F2 M252
scaffold_6496	Scipio	protein_match	665331	665560	1.0	+	1	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 1838 1913
scaffold_6496	Scipio	protein_match	665936	668058	1.0	+	2	gene_id=kassiopeia_gene_id339153 GI19779 [Drosophila mojavensis];Query=GI19779%20[Drosophila%20mojavensis] 1914 2621
# protein sequence = [MARRKGSGRGKSTVNSRKNTLESTREKLKDEPTAANTSQASKFDETMESAATTTATATNTAKQHYKTANKQYKTNNNN
# NNSINNSNNNKVSNTRRATAAAAAAAAAAAQATTTTTTTAATATTKKQTYRSSNTTAATTATTTTLKTNNNNSNKVKAATATSEANEATEATEATAID
# NNKSKRDNLSELPAKIADSNSSSNSNTSNNNNNNNSDNSISENNYEFKARDKANVSDSKMTLQHSSNTSSSNTTTTITTNNNSNNNNISISSGSNTNN
# NDAATAAATAIADWKSSSNNLRYLHKKFKRLASTTETEAPDEPTLRTTSLSSTSSVSPPTQLPLVNGHEHSNSNSISNCNSNNHEAESYSKNATVAVA
# GVPRTRTPLSNSSNINISSSSSSNYASNATLSPATFAQHQQQTQPTTTAAAAAAATVTPAATAKPAATFAAAASAAMPATTATSAMPAATSAASATAA
# TVTPATGLSRYVCPYCNLICAKPSVLQKHIRAHTNERPYPCETCGIAFKTKSNFYKHCRSRSHTARMRGLDVPAHEADGLSDQDGDGDLSNSSSELLS
# VEILSSADSPYDEQSMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPATVENLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSKEQ
# QQQQQQQQQQQQQQQQQQPLLLQQQQQNRNSNSCCPQQQQQQQPQQQLLPHPQQQQQQLPRSNSQQATAAAAAAPATPTPVGNLSSFASGMQVNVEKV
# QEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNNNSSSNNSNSSNNNNSSQQLGDAKVNLAQSIVQKQQQLQQQQQQQQVQLQQQQLQQQ
# QQLQQQQQQQQQQQHIQQYRVIEPVNGLLKRSSSSTGNSNNAYANLKATPPPAALNVKLPPPPPATMLQLLHYRQDPAMPLNKLEQQQQQQQQQATPA
# QQPLNLSAKPKPAKAVTTAAAPAPAAAAATTAAAPATAATAATTTTPTIAAKPAAVATAAANNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFR
# SADELKQHNSTYCQDASSSAPISPASSPSSKYFRSNSISFSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSAAQSPARTSTTATTVAGSS
# GGSSSSNYLAATVAGSSASSSTPTATIASSNSNNSLYSNSHNLPATVAVSIDANNVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAADAQVVITKMHE
# DRLENIISESSAKRPKLSNDSAFALPPATATAAAAAAAATATGVPQQQLMFGNSQELPGFNTGKEERLRRFTSSGGSMIPISECPELDKSPKMIRTPL
# LSGGSFQEMSPRLSEPKPKPAFLLNASNNNNNNNNNIIISNSNNSSQHFQFPPINSITAFNPLTLPAMSESSGKAIPYVPGIPGPSSLTLLPVPPPPQ
# QLLLQRPPAVDAPPFKKSLSPFGGVQNLPSEFSRQPPTPAQRNALHWQSNSSNSGSKLAATVAAGDGLGMQKFNFLLLADNVKEQQPQHEVRHFIFDP
# LHVKRQKTKRQQQQQQRQQQHQVLRQQHQLEQQQLLP--TKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLG
# LKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGLKPKQVMSLYDSRQKMFGAGFTVVQAGANAHSYALVGSQQTISSCSTVNNAQSK
# FYQHQAKQAPAIGALSEANVAAKASEEAAKKLESGQLLVGGYESNEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCSFSFKT
# KGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGDSADSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTP
# PIPQSVSPYPAQLETSMSAASPANSIGSAGGASTQPKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRQVPTDESSAPMDLTKPRPIISAAAGAAAT
# TATSSAAAAAATVAAMELPKSQAQQMRDVIFGAGNNECGFMKTLISVSDKVRISAEMEEQAKRESEGEDVLLHTYIKEQALHNAKRKQSLYNSSSYLM
# TTTTSSSISSSSTTTTSSSSMPVMSSSQQKVGLIYHELPSIEVHEPESTELGELEKEQEKMEQQQQQQLKAIAASSQEKQSEERQQQATATATAPAPA
# PAPAAATHNANLPAAVQQPDAIDFKGVLSNSNSTKPIVTTATATVAAASATATAIVKVLATEEGYNKPSSESATATAAATATTAATPTTTTASGSSSY
# AGRVVPAPPPPIASDARPTCLLCSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHRNKVMMTSTFGVPTTSNPRPFECTDCKI
# AFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLVGGGGSGSEMPAAN
# QDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETNGLTNGLSLKRRLPASSFSSSNGDESDNPLETSEKRARSNTNELTLPIVGSN]
#
##gff-version	3
##query	GI19929%20[Drosophila%20mojavensis] 1 1069
scaffold_6496	Scipio	protein_match	2437757	2437822	1.0	+	0	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 1 22
scaffold_6496	Scipio	protein_match	2457720	2457785	1.0	+	0	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 1 22
scaffold_6496	Scipio	protein_match	2466231	2466954	1.0	+	0	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 23 263
scaffold_6496	Scipio	protein_match	2496029	2496238	1.0	+	2	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 264 333
scaffold_6496	Scipio	protein_match	2496328	2496557	1.0	+	2	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 334 410
scaffold_6496	Scipio	protein_match	2499095	2500914	1.0	+	0	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 411 1017
scaffold_6496	Scipio	protein_match	2501018	2501174	1.0	+	1	gene_id=kassiopeia_gene_id339300 GI19929 [Drosophila mojavensis];Query=GI19929%20[Drosophila%20mojavensis] 1018 1069
# protein sequence = [MDFQSAMETFAEAWVAANAGQQSQALALTRAANAAAVVAAANVKSPSAAASLMDMAVKKEHSLSPTHSALPEDSGVGV
# ALGQLQHRRSSLQGVQEKLTQLQMQHQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAETTNAAGRRSTEGSPPALGLLPHQHQHQQQQQQQQQQQ
# QSLLNAESGCGNALSSSAGSSQNASLAATPKSEREREREREERGSISCLPPAALGMAVGVQAQQQAEKLLSHPALEARRDFDVSKVNPKSLPLHCVVE
# SVHSLHASLTIDTRQPWKRRPNIETDSYVIIAAATPWSEIVQTALQRLGYSQEVANTARGSLIIKHWKPIPLEKISDNPAVPVSDIVGELTSVITLRI
# VILRPKTSPFGEIKDKLLKLLVLQSHALLRSTGCPLDEVTLSQICRSSHQNTYALPGGEISDELRRKFDQWWSNQLSPQSAMTPKMLPFMSAPSTVPV
# VPGDMDFPVGTAMAAAAAAAAHAAGAAANPLGAMSSRESLLLANEAAGHHANAAVVGQAQAAGHHGNMLVHPMHAGMHHHHHATAHGGQYPSQKTRMR
# TSFDPEMELPKLQKWFQENPHPSRQQIQTYVVQLNALESRRGRKPLDVNNVVYWFKNARAAQKRAEMRGGSLGNAMSALGHAAMNGYLSQHAPLGQNS
# SSSAGSQPLSMGNLSMSHDYLKSPMSLKSEDIDTMSQHSDELEEEPSRPSTPQLPLSLTTHERHRGSPMLEEDDDEEQQQQQQQQQQQQRSKSVNSDV
# VNGVEEHDEKPIVLKASDAAELPDQDNSNSNANASGLAEAAGNEEASAAASNNSNNTSSNNNNNNSNNNNNSSNSNNNSDNNNEQESGGSPTKRSTPK
# EEDDELDMDEDDDENEQDTSHLDEFRSPSPDLAGSVTPHKDQLPFPMVPNSMFSQSFMYMSHYIPAFGQAAAAHPHAHHAAAAAAAAGLQPNALMGGA
# GLNLSSISNEERRKRNRTFIDPVTEVPKLEQWFAMNTHPSHNLILKYTEDLNTMPYRQKFPRLESKNVQFWFKNRRAKCKRLKMSLYDNSQCGQLGGL
# GSFVPKYEERD]
#
##gff-version	3
##query	GI19943%2C%20partial%20[Drosophila%20mojavensis] 1 281
scaffold_6496	Scipio	protein_match	2827097	2827259	1.0	+	0	gene_id=kassiopeia_gene_id339314 GI19943, partial [Drosophila mojavensis];Query=GI19943%2C%20partial%20[Drosophila%20mojavensis] 1 54
scaffold_6496	Scipio	protein_match	2827318	2827531	1.0	+	2	gene_id=kassiopeia_gene_id339314 GI19943, partial [Drosophila mojavensis];Query=GI19943%2C%20partial%20[Drosophila%20mojavensis] 55 126
scaffold_6496	Scipio	protein_match	2828986	2829199	1.0	+	2	gene_id=kassiopeia_gene_id339314 GI19943, partial [Drosophila mojavensis];Query=GI19943%2C%20partial%20[Drosophila%20mojavensis] 55 126
scaffold_6496	Scipio	protein_match	2829262	2829727	1.0	+	1	gene_id=kassiopeia_gene_id339314 GI19943, partial [Drosophila mojavensis];Query=GI19943%2C%20partial%20[Drosophila%20mojavensis] 127 281
# protein sequence = [KLKGKTLFITGASRGIGKAIALKAARDGANIVIAAKTADPHPKLPGTIYTAAEEIERAGGKALPCIVDVRDERQVQQA
# VEAAVAKFGGIDIVINNASAISLTPTLETDMKRYDLMQNINTRGTFLVSKTCLPYLLKSDNPHILNLSPPLNMKPHWFANHTAYTIAKYGMSMCVLGM
# AEEFRSQGVAVNALWPRTTIHTAAIEMLSGSESAKYARKPEIMADAAYAIICRDAREYTGNFFMDDEVLLDVGVRDFSKYACSPENMHNLQLDIFLDD
# EGPFAKL]
#
##gff-version	3
##query	GI20066%20[Drosophila%20mojavensis] 1 377
scaffold_6496	Scipio	protein_match	5084357	5084570	1.0	+	0	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 1 71
scaffold_6496	Scipio	protein_match	5092555	5092736	1.0	+	2	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 72 132
scaffold_6496	Scipio	protein_match	5093047	5093147	1.0	+	0	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 133 166
scaffold_6496	Scipio	protein_match	5093383	5093478	1.0	+	1	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 167 198
scaffold_6496	Scipio	protein_match	5094179	5094326	1.0	+	1	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 199 247
scaffold_6496	Scipio	protein_match	5094409	5094484	1.0	+	0	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 248 272
scaffold_6496	Scipio	protein_match	5094877	5095062	1.0	+	2	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 273 334
scaffold_6496	Scipio	protein_match	5095270	5095394	1.0	+	2	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 335 376
scaffold_6496	Scipio	protein_match	5096175	5096290	1.0	+	2	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 335 373
scaffold_6496	Scipio	protein_match	5097013	5097140	1.0	+	2	gene_id=kassiopeia_gene_id339432 GI20066 [Drosophila mojavensis];Query=GI20066%20[Drosophila%20mojavensis] 335 377
# protein sequence = [MSTDSSRRIQVPDELKEVLLQFSISYLVEQPPDLIDFAADYFNKLQANRPATGSTDNTADDNQSVNSQEGDAEPPAVQ
# STRRKSVFAEAYDPEADDDDDGATAVFPKTDEQRARLIESVKNVLLFRSLEKEQMNQVLDAMFERKVQPGDFIIRQGDDGDNFYVIESGIYKVYINDK
# HISTYTHTGLFGELALLYNMPRAATVQAETVGLLWAMDRQTFRRILLKSAFKKRKMYEELLNSVPMLKALQNYERMNLADALVTKTYEDGERIIKQGD
# AADGMYFIEEGTVSVRMDQDDSEIEISQLGKGQYFGELALVTHRPRAASVYATGGTVKLAFLDVRAFERLLGPCMDIMKRNIDDYESQLVKIFGSKNN
# ITDTR]
#
##gff-version	3
##query	GI20081%20[Drosophila%20mojavensis] 1 131
scaffold_6496	Scipio	protein_match	5243062	5243208	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 1 49
scaffold_6496	Scipio	protein_match	5515658	5515663	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 50 51;Mismatches=50
scaffold_6496	Scipio	protein_match	5524885	5524962	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5527923	5527988	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 73
scaffold_6496	Scipio	protein_match	5528210	5528296	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 80
scaffold_6496	Scipio	protein_match	5529487	5529555	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 74
scaffold_6496	Scipio	protein_match	5534175	5534267	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 82
scaffold_6496	Scipio	protein_match	5538969	5539034	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 73
scaffold_6496	Scipio	protein_match	5571914	5571982	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 74
scaffold_6496	Scipio	protein_match	5582416	5582496	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 78
scaffold_6496	Scipio	protein_match	5582872	5582946	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 76
scaffold_6496	Scipio	protein_match	5614949	5615026	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5653497	5653631	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 96
scaffold_6496	Scipio	protein_match	5655520	5655555	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 63
scaffold_6496	Scipio	protein_match	5669960	5670031	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 75
scaffold_6496	Scipio	protein_match	5671193	5671255	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 72
scaffold_6496	Scipio	protein_match	5672519	5672569	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 68
scaffold_6496	Scipio	protein_match	5690631	5690708	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5691591	5691641	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 68
scaffold_6496	Scipio	protein_match	5705017	5705088	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 75
scaffold_6496	Scipio	protein_match	5720208	5720261	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 69
scaffold_6496	Scipio	protein_match	5754968	5755060	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 82
scaffold_6496	Scipio	protein_match	5755286	5755393	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 87
scaffold_6496	Scipio	protein_match	5756313	5756423	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 88
scaffold_6496	Scipio	protein_match	5766278	5766373	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 83
scaffold_6496	Scipio	protein_match	5769977	5770063	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 80
scaffold_6496	Scipio	protein_match	5793713	5793772	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 71
scaffold_6496	Scipio	protein_match	5804355	5804432	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5819605	5819682	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5821105	5821224	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 91
scaffold_6496	Scipio	protein_match	5839339	5839428	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 81
scaffold_6496	Scipio	protein_match	5863476	5863607	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 95
scaffold_6496	Scipio	protein_match	5886216	5886293	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	5892814	5892876	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 72
scaffold_6496	Scipio	protein_match	5957546	5957635	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 81
scaffold_6496	Scipio	protein_match	5964866	5964934	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 74
scaffold_6496	Scipio	protein_match	5968540	5968647	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 87
scaffold_6496	Scipio	protein_match	5985835	5985885	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 68
scaffold_6496	Scipio	protein_match	6020472	6020579	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 87
scaffold_6496	Scipio	protein_match	6032585	6032641	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 70
scaffold_6496	Scipio	protein_match	6043625	6043708	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 79
scaffold_6496	Scipio	protein_match	6050000	6050086	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 80
scaffold_6496	Scipio	protein_match	6050164	6050205	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 65
scaffold_6496	Scipio	protein_match	6053418	6053486	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 74
scaffold_6496	Scipio	protein_match	6060164	6060238	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 76
scaffold_6496	Scipio	protein_match	6060811	6060891	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 78
scaffold_6496	Scipio	protein_match	6088516	6088638	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 92
scaffold_6496	Scipio	protein_match	6099858	6099905	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 67
scaffold_6496	Scipio	protein_match	6100922	6100993	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 75
scaffold_6496	Scipio	protein_match	6101951	6101989	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 64
scaffold_6496	Scipio	protein_match	6102226	6102321	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 83
scaffold_6496	Scipio	protein_match	6103656	6103760	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 86
scaffold_6496	Scipio	protein_match	6104988	6105065	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77
scaffold_6496	Scipio	protein_match	6110560	6110637	0.557	+	0	gene_id=kassiopeia_gene_id339446 GI20081 [Drosophila mojavensis];Query=GI20081%20[Drosophila%20mojavensis] 52 77;Mismatches=68
# gap 78 131
# protein sequence = [MSLRCSTIDQQIYALTMTTTNRKTRRQARGHVTNNISYNNNNNFSREMCxQQQQQQQQQQQQQQQQQxQQQQQQQQQ.
# .....................................................]
#
##gff-version	3
##query	GI20108%20[Drosophila%20mojavensis] 1 63
scaffold_6496	Scipio	protein_match	5993730	5993753	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 1 8
scaffold_6496	Scipio	protein_match	5994199	5994363	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 9 63
scaffold_6496	Scipio	protein_match	5995179	5995343	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 9 63
scaffold_6496	Scipio	protein_match	5996211	5996384	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 9 66
scaffold_6496	Scipio	protein_match	5997746	5997910	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 9 63
scaffold_6496	Scipio	protein_match	5999083	5999247	1.0	+	0	gene_id=kassiopeia_gene_id339472 GI20108 [Drosophila mojavensis];Query=GI20108%20[Drosophila%20mojavensis] 9 63
# protein sequence = [MNNSFGEKNTTYYMRHVQFDFKYLPSYWPEYNFTYAGKFYMDKVLTFEMHITGAICNVESKCI]
#
##gff-version	3
##query	GI20218%20[Drosophila%20mojavensis] 1 153
scaffold_6496	Scipio	protein_match	7950387	7950489	1.0	+	0	gene_id=kassiopeia_gene_id339578 GI20218 [Drosophila mojavensis];Query=GI20218%20[Drosophila%20mojavensis] 1 34
scaffold_6496	Scipio	protein_match	7960074	7960188	1.0	+	0	gene_id=kassiopeia_gene_id339578 GI20218 [Drosophila mojavensis];Query=GI20218%20[Drosophila%20mojavensis] 1 38
scaffold_6496	Scipio	protein_match	7962383	7962503	1.0	+	2	gene_id=kassiopeia_gene_id339578 GI20218 [Drosophila mojavensis];Query=GI20218%20[Drosophila%20mojavensis] 35 75
scaffold_6496	Scipio	protein_match	7962574	7962636	1.0	+	1	gene_id=kassiopeia_gene_id339578 GI20218 [Drosophila mojavensis];Query=GI20218%20[Drosophila%20mojavensis] 76 96
scaffold_6496	Scipio	protein_match	7962708	7962879	1.0	+	1	gene_id=kassiopeia_gene_id339578 GI20218 [Drosophila mojavensis];Query=GI20218%20[Drosophila%20mojavensis] 97 153
# protein sequence = [MDFWGIFMFFLLTFLIMSCCGYCCTTKRRGTVLSTPVVVTSATHTAPGGYPVTQIPATTYQPNAYGTPYPAQTAGNVT
# VQMPMGMPMPGGQPPMPAMPPQMAAAGAYPPMMPPGAGAANMNPPSYDMAMANPGPSVVPGTYEKQMPYNPNYAQ]
#
##gff-version	3
##query	GI20371%20[Drosophila%20mojavensis] 1 120
scaffold_6496	Scipio	protein_match	9872692	9872893	1.0	+	0	gene_id=kassiopeia_gene_id339729 GI20371 [Drosophila mojavensis];Query=GI20371%20[Drosophila%20mojavensis] 1 67
scaffold_6496	Scipio	protein_match	9874559	9874719	1.0	+	2	gene_id=kassiopeia_gene_id339729 GI20371 [Drosophila mojavensis];Query=GI20371%20[Drosophila%20mojavensis] 68 121
scaffold_6496	Scipio	protein_match	9877028	9877185	1.0	+	2	gene_id=kassiopeia_gene_id339729 GI20371 [Drosophila mojavensis];Query=GI20371%20[Drosophila%20mojavensis] 68 120
# protein sequence = [MALCLLLLIGLGTLIFWLYRLNKEYYVLAFFAKRVRTKDGRPVESIAPLSKGNTIFGNSFDLYGMDDGQKFALLEMKT
# LLIVILKKFIVLPLVDPKDIVFHTGITLRCKNDIRVKLVRRS]
#
##gff-version	3
##query	GI20476%20[Drosophila%20mojavensis] 1 353
scaffold_6496	Scipio	protein_match	11737132	11737249	1.0	+	0	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 1 39
scaffold_6496	Scipio	protein_match	11737736	11737920	1.0	+	2	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 40 101
scaffold_6496	Scipio	protein_match	11737980	11738134	1.0	+	0	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 102 153
scaffold_6496	Scipio	protein_match	11738280	11738408	1.0	+	1	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 154 196
scaffold_6496	Scipio	protein_match	11738707	11738835	1.0	+	1	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 154 196
scaffold_6496	Scipio	protein_match	11739109	11739238	1.0	+	1	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 197 239
scaffold_6496	Scipio	protein_match	11739306	11739459	1.0	+	0	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 240 290
scaffold_6496	Scipio	protein_match	11739579	11739686	1.0	+	2	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 291 326
scaffold_6496	Scipio	protein_match	11739891	11739970	1.0	+	2	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 327 353
scaffold_6496	Scipio	protein_match	11740298	11740377	1.0	+	2	gene_id=kassiopeia_gene_id339832 GI20476 [Drosophila mojavensis];Query=GI20476%20[Drosophila%20mojavensis] 327 353
# protein sequence = [MECCLSEEAKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGYIKLVFQNIF
# MAMQSMIKAMDMLKISYGVGEHNALADLVMSIDYETVTTFEDPYLNAIKTLWSDAGIQECYDRRREYQLTDSAKYYLMDLDRVAQPDYLPTEQDILRV
# RVPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLE
# EKIMYSHLVDYFPEYDGPQRDAIAAREFILRMFVDLNPDSEKIIYSHFTCATDTENIRFVFAAVKDTILQSNLKEYNLV]
#
##gff-version	3
##query	GI20537%20[Drosophila%20mojavensis] 1 248
scaffold_6496	Scipio	protein_match	12746656	12746717	1.0	+	0	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 1 21
scaffold_6496	Scipio	protein_match	12746787	12746900	1.0	+	1	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 22 59
scaffold_6496	Scipio	protein_match	12746984	12747110	1.0	+	1	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 60 101
scaffold_6496	Scipio	protein_match	12748223	12748346	1.0	+	0	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 102 142
scaffold_6496	Scipio	protein_match	12748468	12748631	1.0	+	2	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 143 197
scaffold_6496	Scipio	protein_match	12748891	12749054	1.0	+	2	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 143 197
scaffold_6496	Scipio	protein_match	12749669	12749821	1.0	+	0	gene_id=kassiopeia_gene_id339892 GI20537 [Drosophila mojavensis];Query=GI20537%20[Drosophila%20mojavensis] 198 248
# protein sequence = [MSTVDKEELVQKAKLAEQSERYDDMAQAMKSVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEASARK
# QQLAREYRERVEKELREICYEVLGLLDKYLIPKASNPESKVFYLKMKGDYYRYLAEVATGDARNTVVDDSQTAYQDAFDISKGKMQPTHPIRLGLALN
# FSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPQEGGDN]
#
##gff-version	3
##query	GI20539%20[Drosophila%20mojavensis] 1 836
scaffold_6496	Scipio	protein_match	12755515	12755661	1.0	+	0	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 1 49
scaffold_6496	Scipio	protein_match	12757258	12757599	1.0	+	0	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 50 163
scaffold_6496	Scipio	protein_match	12757664	12757818	1.0	+	0	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 164 215
scaffold_6496	Scipio	protein_match	12757950	12758093	1.0	+	1	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 216 263
scaffold_6496	Scipio	protein_match	12758642	12758750	1.0	+	1	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 264 299
scaffold_6496	Scipio	protein_match	12759232	12759340	1.0	+	1	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 264 299
scaffold_6496	Scipio	protein_match	12760116	12760304	1.0	+	0	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 300 362
scaffold_6496	Scipio	protein_match	12760567	12761009	1.0	+	0	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 363 510
scaffold_6496	Scipio	protein_match	12761069	12761911	1.0	+	1	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 511 791
scaffold_6496	Scipio	protein_match	12761975	12762110	1.0	+	1	gene_id=kassiopeia_gene_id339894 GI20539 [Drosophila mojavensis];Query=GI20539%20[Drosophila%20mojavensis] 792 836
# protein sequence = [MNSDTNQRFLARGSQRDKGLAVFTSGGDSQGMNAAVRACVRMAIYLGCKVYFIREGYQGMVDGGDCIQEASWSSVSSI
# IHRGGTIIGSARCKDFRERAGRLKAANNLVQRGITNLVVIGGDGSLTGANLFRQEWSSLLDELEKNKSITPEQKNKYNVLHIVGLVGSIDNDFCGTDM
# TIGTDTALHRIIEAIDAIASTAYSHQRTFIMEVMGRHCGYLPVVAGVISEADYVFLPEYPPPQDWPDRLTLKLDQASNQPSAISSRFYLAISAAIATE
# ADFMFIPEEPAPTNWQDDLCKKLAQERSAGQRLNIVIVAEGASDREGNPITAEQVRKVIDERLKHDARITVLGHVQRGGNPSAFDRVLACRMGAEATL
# ALMEATPESVPVVISLDGNQTVRVPLMECVERTQAVAKAMAERRWADAVKLRGRSFERNLETYKMLTRLKPPKENFDEQGKGIEGYRLAVMHIGAPAC
# GMNAAVRSFVRNAIYRGDVVYGINDGVEGLIAGNVRELGWSDVSGWVGQGGAYLGTKRTLPEGKFKEIAARLKEFKIQGLLIIGGFESYHAAGQISDQ
# RDNYPEFCIPIVVVPATISNNVPGTEFSLGCDTGLNEITEICDRIRQSAQGTKRRVFVIETMGGYSGYLATLAGLAGGADAAYIYEEKFSIKDLQQDV
# YHMASKMAEGVSRGLILRNEKASENYTTDFIYRLYSEEGKGLFTCRMNILGHMQQGGSPSPFDRNMGTKMAAKCVDWLATQIKNNIDSNGVVNCKSTD
# TATLLGIVSRQYRFTPLVDLIADTNFDQRIPKKQWWLRLRPLLRILAKHDSAYEEEGMYITVEEECATDAVA]
#
##gff-version	3
##query	GI20595%20[Drosophila%20mojavensis] 1 83
scaffold_6496	Scipio	protein_match	13559312	13559507	1.0	+	0	gene_id=kassiopeia_gene_id339949 GI20595 [Drosophila mojavensis];Query=GI20595%20[Drosophila%20mojavensis] 1 65
scaffold_6496	Scipio	protein_match	13560154	13560194	1.0	+	2	gene_id=kassiopeia_gene_id339949 GI20595 [Drosophila mojavensis];Query=GI20595%20[Drosophila%20mojavensis] 66 79
scaffold_6496	Scipio	protein_match	13561233	13561285	1.0	+	2	gene_id=kassiopeia_gene_id339949 GI20595 [Drosophila mojavensis];Query=GI20595%20[Drosophila%20mojavensis] 66 83
# protein sequence = [MASERLASGGRHARVSPTPGRGSKIAYTPCPRSEPPQDLELAATARNCLAIPMSSLQTANGPNSKAAAAAATAAAPAA
# VDLQN]
#
##gff-version	3
##query	GI20621%20[Drosophila%20mojavensis] 1 51
scaffold_6496	Scipio	protein_match	13766309	13766408	1.0	+	0	gene_id=kassiopeia_gene_id339975 GI20621 [Drosophila mojavensis];Query=GI20621%20[Drosophila%20mojavensis] 1 33
scaffold_6496	Scipio	protein_match	13767876	13767931	1.0	+	2	gene_id=kassiopeia_gene_id339975 GI20621 [Drosophila mojavensis];Query=GI20621%20[Drosophila%20mojavensis] 34 52
scaffold_6496	Scipio	protein_match	13768157	13768209	1.0	+	2	gene_id=kassiopeia_gene_id339975 GI20621 [Drosophila mojavensis];Query=GI20621%20[Drosophila%20mojavensis] 34 51
# protein sequence = [MSMSRSLGCDEQQMCGKHLRLHPKADGGGGGAVGYLLIAVVNFFSWRITQI]
#
##gff-version	3
##query	GI20626%20[Drosophila%20mojavensis] 1 681
scaffold_6496	Scipio	protein_match	14139121	14139166	1.0	+	0	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 1 15
scaffold_6496	Scipio	protein_match	14140048	14140084	1.0	+	0	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 1 12
scaffold_6496	Scipio	protein_match	14140738	14141144	1.0	+	2	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 16 151
scaffold_6496	Scipio	protein_match	14141201	14141513	1.0	+	0	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 152 255
scaffold_6496	Scipio	protein_match	14141632	14142169	1.0	+	2	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 256 435
scaffold_6496	Scipio	protein_match	14142224	14142367	1.0	+	1	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 436 483
scaffold_6496	Scipio	protein_match	14142425	14142509	1.0	+	1	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 484 511
scaffold_6496	Scipio	protein_match	14142569	14142745	1.0	+	0	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 512 570
scaffold_6496	Scipio	protein_match	14142804	14142942	1.0	+	0	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 571 616
scaffold_6496	Scipio	protein_match	14143005	14143198	1.0	+	2	gene_id=kassiopeia_gene_id339980 GI20626 [Drosophila mojavensis];Query=GI20626%20[Drosophila%20mojavensis] 617 681
# protein sequence = [MHLTINLKCRKFEIWAFSLSSLFLVCYILKFTLALIILNKEIETSRGMLYPRESETREVRTLDGIWNFVRSDETNPTQ
# GIRDGWFKDDLSKSMPTIPMPVPASYNDITTEQTLRDHVGTVWYDRKFFVPRSWGQDQRVWLRFGSVHYEAFVWINGRSAVKHEMGHLPFETEVTHLL
# NYGAENRITVMCDNALIQTTVPQGKISEVANDDGVTIIQSYTFDFFNYAGIHRSVHLYTTPKTFIEEVEVKTNLSQNNSVGTVDYSITVNGTAANEAE
# NTLFARLQIYNREGVQVANVTSDSKLVGSLQVDNVKPWWPYLMHSDPGYLYELEIRLYAAKEQLLDVYRLKVGIRTLSWTNTTFLINGKPIYFRGFGR
# HEDADVRGRGLDNALMARDFNLLKWIGANAYRTSHYPYSEESMQFADQHGIMIIDECPSVDTENFNQVLLDRHKSSLEQLVHRDRNHPSVVMWSIANE
# PRTGQVNADTYFQFVANYTRSLDSTRPITAAIAVPSNDDKAGRHLDIISFNRYNAWYSNTGRLDMVTQRVISEATGWNKKYDKPVLMSEYGADTLEGL
# HLQPAFVWSEEFQTEVFSRHFKAFDALRRQKWFIGEFVWNFADFKTAQTYTRVGGNKKGVFTRARQPKAAAHLLRQRYFALGREVDQCNVPNDLFTYI
# VDVGASNVNHDSADL]
#
##gff-version	3
##query	dscam%20[Drosophila%20mojavensis] 1 2326
scaffold_6496	Scipio	protein_match	16170855	16170915	1.0	+	0	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1 20
scaffold_6496	Scipio	protein_match	16184797	16185141	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 21 135
scaffold_6496	Scipio	protein_match	16187204	16187365	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 136 189
scaffold_6496	Scipio	protein_match	16187554	16187715	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 190 243
scaffold_6496	Scipio	protein_match	16189240	16189407	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 299
scaffold_6496	Scipio	protein_match	16189531	16189692	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 297
scaffold_6496	Scipio	protein_match	16189833	16189994	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 297
scaffold_6496	Scipio	protein_match	16190121	16190291	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 300
scaffold_6496	Scipio	protein_match	16190422	16190601	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 303
scaffold_6496	Scipio	protein_match	16190762	16190932	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 300
scaffold_6496	Scipio	protein_match	16191079	16191252	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 244 301
scaffold_6496	Scipio	protein_match	16194092	16194241	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 301 350
scaffold_6496	Scipio	protein_match	16195695	16195818	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16195915	16196038	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16196111	16196234	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16196309	16196435	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16196510	16196642	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 395
scaffold_6496	Scipio	protein_match	16196735	16196858	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16196952	16197075	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16197163	16197286	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16197394	16197517	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16197608	16197731	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16197859	16197982	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16198412	16198538	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16198658	16198784	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16198894	16199020	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16199052	16199178	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16199282	16199405	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16199460	16199583	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16199658	16199781	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16199857	16199980	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16200048	16200171	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16200251	16200374	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16200437	16200560	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16200633	16200756	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16200844	16200967	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16201037	16201160	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16201249	16201372	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16201466	16201589	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16201920	16202043	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16202160	16202283	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16202376	16202499	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16202582	16202705	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16202807	16202930	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16203027	16203150	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16203247	16203367	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16203464	16203584	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16203679	16203799	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16203874	16204000	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 393
scaffold_6496	Scipio	protein_match	16204111	16204231	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16204328	16204451	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16205542	16205665	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16205772	16205895	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16205990	16206113	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16206200	16206323	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16206401	16206524	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16206607	16206730	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16206779	16206902	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16206976	16207099	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 392
scaffold_6496	Scipio	protein_match	16207198	16207318	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16207401	16207521	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16207617	16207737	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 351 391
scaffold_6496	Scipio	protein_match	16208044	16208888	1.0	+	1	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 392 672
scaffold_6496	Scipio	protein_match	16209272	16209433	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 673 726
scaffold_6496	Scipio	protein_match	16209594	16209899	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 727 828
scaffold_6496	Scipio	protein_match	16210046	16210333	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 727 822
scaffold_6496	Scipio	protein_match	16210463	16210750	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 727 822
scaffold_6496	Scipio	protein_match	16210833	16211120	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 727 822
scaffold_6496	Scipio	protein_match	16211222	16211512	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16211608	16211898	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16212097	16212387	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16212497	16212787	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16212905	16213195	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16213754	16214044	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16214148	16214438	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 829 925
scaffold_6496	Scipio	protein_match	16214552	16214836	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1020
scaffold_6496	Scipio	protein_match	16214952	16215260	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1028
scaffold_6496	Scipio	protein_match	16215923	16216198	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1017
scaffold_6496	Scipio	protein_match	16216429	16216716	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16216813	16217103	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1022
scaffold_6496	Scipio	protein_match	16218354	16218641	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16219978	16220265	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16220439	16220726	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16221038	16221325	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16221439	16221732	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1023
scaffold_6496	Scipio	protein_match	16221867	16222154	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1021
scaffold_6496	Scipio	protein_match	16222607	16222891	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1020
scaffold_6496	Scipio	protein_match	16223144	16223422	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1018
scaffold_6496	Scipio	protein_match	16223703	16224002	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 926 1025
scaffold_6496	Scipio	protein_match	16225483	16225602	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1021 1060
scaffold_6496	Scipio	protein_match	16225671	16226897	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1061 1469
scaffold_6496	Scipio	protein_match	16226964	16227119	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1470 1521
scaffold_6496	Scipio	protein_match	16227181	16227864	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1522 1749
scaffold_6496	Scipio	protein_match	16228409	16228517	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1750 1786
scaffold_6496	Scipio	protein_match	16228589	16228765	1.0	+	1	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1787 1845
scaffold_6496	Scipio	protein_match	16228851	16229017	1.0	+	1	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1846 1900
scaffold_6496	Scipio	protein_match	16231322	16231489	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1901 1956
scaffold_6496	Scipio	protein_match	16231784	16231975	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1901 1964
scaffold_6496	Scipio	protein_match	16233424	16233579	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 1957 2008
scaffold_6496	Scipio	protein_match	16234216	16234374	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2009 2061
scaffold_6496	Scipio	protein_match	16234711	16235018	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2062 2164
scaffold_6496	Scipio	protein_match	16235140	16235320	1.0	+	0	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2165 2224
scaffold_6496	Scipio	protein_match	16235378	16235536	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2225 2277
scaffold_6496	Scipio	protein_match	16236639	16236705	1.0	+	2	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2278 2300
scaffold_6496	Scipio	protein_match	16237993	16238071	1.0	+	1	gene_id=kassiopeia_gene_id340175 dscam [Drosophila mojavensis];Query=dscam%20[Drosophila%20mojavensis] 2301 2326
# protein sequence = [MMMPNECHKWLTLFAAVALLANIGSTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWVRSDG
# TAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWH
# TDQEENYFPGTEYVVSQHYEEDIHKAFVIRGNSAILKCDIPSFVADFVNVISWHTDQEENFYPDTEYVVSQFYITEAENEYVIKGNAAVVKCKIPSFV
# ADFVQIEAWVDDQGVELWRDNSTGAYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIGSSPPKINALTYKPNTVEF
# HSSTAILCPAQGYPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTIDFGRP
# AVFTCQYTGNPIKTVSWMKDGKAIGHSDSVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPT
# PEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLMVTCPVAGYPID
# SIVWERDNRPLPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVPPQIVPFDFGEEAINMSDMVSATCTVNKGDTPLEVYW
# TTAPEPKLGAARLMSNDGILITKTTQRISMLSIESVHARHRANYTCVARNAAGIVYHTAELRVNVPPQVRPFSFGESAADVGDVASANCVVPKGDGPL
# EIRWFLNAVPIVDGQSGFSLGRWNDRTSMLNIDSLNAVHRGIYKCIASNAAGSSEYVAELQVNVLPSIHPFSFDNDANEGDSIQLTCHVSKGDLPLRI
# RWTHNDLPLFPHLGVMASKIGERISLLTVESVKAVHSGNYSCVASNSAGNSSYTTELFVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKK
# AVGDTPGEYKDLKKSDNIRVEEGTLHIDNIQKTNEGYYLCEAINGIGSGLSAVIMVSVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKPIGILWNMN
# NMRLDPKNDNRYTIREEILSAGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLIRYII
# EFKRSRASWDEIDRVMVPGHTTEAQVQKLSPATTYNIRIVAENEIGSSQSSEAVTIITAEEAPSGKPQNIKVDPVNQTTLRVMWKPPPRSDWNGEILG
# YYVGYKLSNTNSSYIFETINFITEEGKEHSLELNNLRVYTQYSVVIQAFNKIGAGPLSDEEKQFTAEGTPSQPPSDTACTTLTSQTIRVSWVSPPLES
# ANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQ
# PNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATYKEDAKMPCQAVG
# APQPEITWKIKGVDFSANERMRLLPDGSLLIKSVNRQDAGDYTCHAENSIAKDSITHKLIVLAPPQSPQVTLSATTTDTLTVRLKPHEGDTAPLHGYT
# LHYKPEFGEWETAEVSVESQKYNIENLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVES
# KKRDQLEWNQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPSRDLPELTAEDTIRIILSNLNLVVPVVAALLVIII
# AIIVICILRSKGNHHKDDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRGRGSGLRSNHSTWDPRRNPNLYEELKAPPV
# PMHGIGNHYGHAHGTPECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMNFQTFPHQNGHTPVPGHAGTMLPPGHPGHVHSRSGSQSMPRANRYQRK
# NSQGGQSSIYTPAPEYDDPANCAEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDHYGSRGSMGRRSIGSARNPGNGS
# PEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRDHGPRGNYGAVKRSPQPKDQRTTEEMRKLIERNEAGPKQLQLQQANGAGFTAYDTMAV]
#
##gff-version	3
##query	GI20886%20[Drosophila%20mojavensis] 1 607
scaffold_6496	Scipio	protein_match	17364156	17364365	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 1 70
scaffold_6496	Scipio	protein_match	17364437	17364557	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 71 110
scaffold_6496	Scipio	protein_match	17383097	17383147	1.0	+	2	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 111 127
scaffold_6496	Scipio	protein_match	17383229	17383314	1.0	+	2	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 128 156
scaffold_6496	Scipio	protein_match	17384306	17385262	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 157 475
scaffold_6496	Scipio	protein_match	17385323	17385517	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 476 540
scaffold_6496	Scipio	protein_match	17386346	17386467	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 541 581
scaffold_6496	Scipio	protein_match	17387049	17387164	1.0	+	0	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 541 579
scaffold_6496	Scipio	protein_match	17387288	17387372	1.0	+	1	gene_id=kassiopeia_gene_id340235 GI20886 [Drosophila mojavensis];Query=GI20886%20[Drosophila%20mojavensis] 580 607
# protein sequence = [MQKMPSQILNDGSGSGSLNNAASLLGASPNAITVKTAYNGQVIITTIDKNITYEDLCYEIRNICRFPIDQPFTIKWVD
# EENDPCTISTDMELNEAIRLYEMNYDSQLVIHVFPNVPQAPGLSCDGEDRSIYRRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQGFK
# CIQCKLLVHKKCHKLVQKQCTDQPEPLVKERAEEANDPMPVPLPPLPYEAVAGTGDAYESHEHAHIVVPPPPEDSMEPATQRQYSLNDFELIRVIGRG
# SYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAE
# ISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDIAGAS
# ENPDQNTEDYLFQVILEKTIRIPRSLSVKAASVLKGFLNKNPADRLGCHRESAFMDIVNHPFFKVIDWEMLERKQVSPPFKPRLDSDRDLANFPIEFT
# GEPVQLTPDDDHVIGNIDQSEFEGFEYVNPLLMSLEDCV]
#
##gff-version	3
##query	GI20888%20[Drosophila%20mojavensis] 1 120
scaffold_6496	Scipio	protein_match	17406831	17406864	1.0	+	0	gene_id=kassiopeia_gene_id340237 GI20888 [Drosophila mojavensis];Query=GI20888%20[Drosophila%20mojavensis] 1 11
scaffold_6496	Scipio	protein_match	17406935	17407269	1.0	+	2	gene_id=kassiopeia_gene_id340237 GI20888 [Drosophila mojavensis];Query=GI20888%20[Drosophila%20mojavensis] 12 123
scaffold_6496	Scipio	protein_match	17409115	17409428	1.0	+	2	gene_id=kassiopeia_gene_id340237 GI20888 [Drosophila mojavensis];Query=GI20888%20[Drosophila%20mojavensis] 12 116
scaffold_6496	Scipio	protein_match	17409800	17409811	1.0	+	0	gene_id=kassiopeia_gene_id340237 GI20888 [Drosophila mojavensis];Query=GI20888%20[Drosophila%20mojavensis] 117 120
# protein sequence = [MYNEQETEDDTTVSTTILAIGDETEDSNQEKPEKTLKDLEVEFKNYFSVLLMGNHKPKDEADGTYLLEWFGMESFRRE
# NEPVRFQFYCVGAQKTKPVNANPFHFFQTINAQALMREKSCS]
#
##gff-version	3
##query	GI20906%20[Drosophila%20mojavensis] 1 117
scaffold_6496	Scipio	protein_match	17731852	17731863	1.0	+	0	gene_id=kassiopeia_gene_id340254 GI20906 [Drosophila mojavensis];Query=GI20906%20[Drosophila%20mojavensis] 1 4
scaffold_6496	Scipio	protein_match	17731937	17732293	1.0	+	0	gene_id=kassiopeia_gene_id340254 GI20906 [Drosophila mojavensis];Query=GI20906%20[Drosophila%20mojavensis] 5 123
scaffold_6496	Scipio	protein_match	17733862	17734218	1.0	+	0	gene_id=kassiopeia_gene_id340254 GI20906 [Drosophila mojavensis];Query=GI20906%20[Drosophila%20mojavensis] 5 123
scaffold_6496	Scipio	protein_match	17735896	17736246	1.0	+	0	gene_id=kassiopeia_gene_id340254 GI20906 [Drosophila mojavensis];Query=GI20906%20[Drosophila%20mojavensis] 5 121
scaffold_6496	Scipio	protein_match	17737304	17737642	1.0	+	0	gene_id=kassiopeia_gene_id340254 GI20906 [Drosophila mojavensis];Query=GI20906%20[Drosophila%20mojavensis] 5 117
# protein sequence = [MFKILLVVALIGLVATVDLDEKAETLERKDDVRPDGFNILLKTSNGIEIVQSGDEHGNSKGTFSWVSPEGVPVSLTYV
# ADENGYQPQSDLLPTPPPIPAEIQRALEWIAAHPSKEQL]
#
##gff-version	3
##query	GI20989%20[Drosophila%20mojavensis] 1 117
scaffold_6496	Scipio	protein_match	19262594	19262635	1.0	+	0	gene_id=kassiopeia_gene_id340335 GI20989 [Drosophila mojavensis];Query=GI20989%20[Drosophila%20mojavensis] 1 14
scaffold_6496	Scipio	protein_match	19262709	19263074	1.0	+	0	gene_id=kassiopeia_gene_id340335 GI20989 [Drosophila mojavensis];Query=GI20989%20[Drosophila%20mojavensis] 15 136
scaffold_6496	Scipio	protein_match	19263970	19264278	1.0	+	0	gene_id=kassiopeia_gene_id340335 GI20989 [Drosophila mojavensis];Query=GI20989%20[Drosophila%20mojavensis] 15 117
# protein sequence = [MQFVKAIFLLSCLLFVRENHVKAGVGLFKLLDCTEIVIEGAGKVLVRTIPLLTDWAKCVNFAPDAKGDLGIRDLFPIL
# NQFLKKIIMSAKCMKVALKTVKGYVEPHVKEFMDEKCLE]
#
##gff-version	3
##query	GI21163%20[Drosophila%20mojavensis] 1 681
scaffold_6496	Scipio	protein_match	22708863	22709068	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 1 69
scaffold_6496	Scipio	protein_match	22710927	22710953	1.0	+	1	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 70 78
scaffold_6496	Scipio	protein_match	22717105	22717136	1.0	+	1	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 79 88
scaffold_6496	Scipio	protein_match	22717217	22717296	1.0	+	2	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 89 115
scaffold_6496	Scipio	protein_match	22718894	22719008	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 116 153
scaffold_6496	Scipio	protein_match	22727538	22727649	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 116 152
scaffold_6496	Scipio	protein_match	22733020	22733148	1.0	+	2	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 154 196
scaffold_6496	Scipio	protein_match	22734290	22734446	1.0	+	2	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 197 249
scaffold_6496	Scipio	protein_match	22734504	22734852	1.0	+	1	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 250 365
scaffold_6496	Scipio	protein_match	22734910	22735083	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 366 423
scaffold_6496	Scipio	protein_match	22735140	22735231	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 424 454
scaffold_6496	Scipio	protein_match	22735292	22735493	1.0	+	1	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 455 521
scaffold_6496	Scipio	protein_match	22735559	22735747	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 522 584
scaffold_6496	Scipio	protein_match	22735812	22735952	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 585 631
scaffold_6496	Scipio	protein_match	22736032	22736181	1.0	+	0	gene_id=kassiopeia_gene_id340502 GI21163 [Drosophila mojavensis];Query=GI21163%20[Drosophila%20mojavensis] 632 681
# protein sequence = [MSENSDNNGDQQSQGQGAEGEAMGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWM
# GFGKQGFQCQVCSYVVHKRCHEYVTFICPGKDKGIDSDSPKTQHHFEPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHARCKENVPSLCGCDHT
# ERRGRIYLEINVKENLLTVHIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLSYDLKPEDKDRRILIEVWDWDRTSRND
# FMGALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDQQDLLKLKQKPSQRKQPMMRCDTHTQSQSKKDMIRATDFNFIKVLGKGSFGKVLLAERK
# GSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHSK
# GILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNV
# SYPKSLSKEAKEACKGFLTKLPSKRLGCGATGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKVFMMNLDQSE
# FVGFSYVNPEYIVSP]
#
##gff-version	3
##query	GI21284%20[Drosophila%20mojavensis] 1 277
scaffold_6496	Scipio	protein_match	25302647	25303260	1.0	+	0	gene_id=kassiopeia_gene_id340619 GI21284 [Drosophila mojavensis];Query=GI21284%20[Drosophila%20mojavensis] 1 205
scaffold_6496	Scipio	protein_match	25303318	25303484	1.0	+	1	gene_id=kassiopeia_gene_id340619 GI21284 [Drosophila mojavensis];Query=GI21284%20[Drosophila%20mojavensis] 206 260
scaffold_6496	Scipio	protein_match	25308677	25308726	1.0	+	2	gene_id=kassiopeia_gene_id340619 GI21284 [Drosophila mojavensis];Query=GI21284%20[Drosophila%20mojavensis] 261 277
scaffold_6496	Scipio	protein_match	25328953	25329002	1.0	+	2	gene_id=kassiopeia_gene_id340619 GI21284 [Drosophila mojavensis];Query=GI21284%20[Drosophila%20mojavensis] 261 277
# protein sequence = [MYRLNATQQQHQQKQQQPQPQQQQQQATKQKQSTIPSHILLQQQLVAAAASAAAAAAAGAGISNNNAALTFQVANVNG
# GAATTTTTTATAATATSVEDNLKLLTTATAAPALMTTPALTPTLMLTPTPMPTLTPAPSTAIKTEPMPDVIALTTNSNNNSNSSTAANASSGIASTSA
# AAAAAAAAAAASSNGHLAFVPNKRARLDAPEDWMSTPSPGSVPSSAPPLSPSPGSQNHSYNMSNGYASPMSAGSYDPYSPNGKTDLNRQTEETPKKKT
# SKC]
#
##gff-version	3
##query	GI14010%20[Drosophila%20mojavensis] 1 251
scaffold_6498	Scipio	protein_match	2934371	2934419	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 1 16
scaffold_6498	Scipio	protein_match	2904524	2904578	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 1 18
scaffold_6498	Scipio	protein_match	2885292	2885340	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 1 16
scaffold_6498	Scipio	protein_match	2883382	2883430	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 1 16
scaffold_6498	Scipio	protein_match	2880394	2880442	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 1 16
scaffold_6498	Scipio	protein_match	2878803	2878974	1.0	-	2	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 17 74
scaffold_6498	Scipio	protein_match	2875681	2875728	1.0	-	1	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 75 90
scaffold_6498	Scipio	protein_match	2856744	2856840	1.0	-	1	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 91 122
scaffold_6498	Scipio	protein_match	2856345	2856663	1.0	-	0	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 123 228
scaffold_6498	Scipio	protein_match	2856202	2856269	1.0	-	2	gene_id=kassiopeia_gene_id333555 GI14010 [Drosophila mojavensis];Query=GI14010%20[Drosophila%20mojavensis] 229 251
# protein sequence = [MYQHVQPSNTNHIYADGHNVSSKATSNGTMCANGSFGTEGPEATETDSSGTGRMRKPLERNGSTQNDTVHLERRLGLF
# SGVALICRNYDSLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNHPRPYKVPII
# IPVLVLVISVYLVAAPIFETPRIEYLYALLFIFAGLIFYVPFVKLGMTPRFMNKVTLFFQLLLEVVPTSSMAMFE]
#
##gff-version	3
##query	GI14025%20[Drosophila%20mojavensis] 1 175
scaffold_6498	Scipio	protein_match	2185510	2185860	0.989	-	0	gene_id=kassiopeia_gene_id333569 GI14025 [Drosophila mojavensis];Query=GI14025%20[Drosophila%20mojavensis] 1 114;Mismatches=44;Gap=M44 D2 F2 M70
scaffold_6498	Scipio	protein_match	2185284	2185501	0.989	-	2	gene_id=kassiopeia_gene_id333569 GI14025 [Drosophila mojavensis];Query=GI14025%20[Drosophila%20mojavensis] 115 187
scaffold_6498	Scipio	protein_match	2185099	2185280	0.989	-	2	gene_id=kassiopeia_gene_id333569 GI14025 [Drosophila mojavensis];Query=GI14025%20[Drosophila%20mojavensis] 115 175
# protein sequence = [MPESDVRSRVHPNLTVAWRELHNPAMSVICQSRIGNDGQCGYPx---GLLCRRLWVLPPRGSVQRNRAEGSERYIPES
# DVRSRVHPNLTVAWRKLHSPALSVLCQSRIGNDGQYGYPRGLLCRRLWVLPPLGSEQRSHAEGPERYTLESQGAKLLNTERLTTARREPHDPTLSVVR
# QG]
#
##gff-version	3
##query	GI14069%20[Drosophila%20mojavensis] 1 336
scaffold_6498	Scipio	protein_match	199685	199856	1.0	-	0	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 1 57
scaffold_6498	Scipio	protein_match	199258	199395	1.0	-	2	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 58 103
scaffold_6498	Scipio	protein_match	199101	199135	1.0	-	2	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 104 115
scaffold_6498	Scipio	protein_match	196421	196747	1.0	-	0	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 116 224
scaffold_6498	Scipio	protein_match	194837	195157	1.0	-	0	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 116 222
scaffold_6498	Scipio	protein_match	192283	192603	1.0	-	0	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 223 329
scaffold_6498	Scipio	protein_match	161456	161476	1.0	-	0	gene_id=kassiopeia_gene_id333613 GI14069 [Drosophila mojavensis];Query=GI14069%20[Drosophila%20mojavensis] 330 336
# protein sequence = [MTAKITSTEFRIFFSLFLGEVPAGGCALDRSTDLAAIQRAIGWAAHSCHSPPPGMAGREETSRRGNHQDHQGQTASVS
# GSTIGGNYAGQDEWLLAPQFGPATHDSVNQLHPSGEQCICCNQLLGDDPLCSAGGLSGFVLCVRKVPVVGGNGASCWKIGRRDCEAAALPMLRATSEE
# DECVAASFGGASLRRAASLRRASYLRRAAILRRFSLVLRVEAGYDLCICCNQLLGDDPLCSAGGLSGFVLCVRKVPVVGGNGASCWKIGRRDCETAAL
# PMLRATSEEDECVAASFGGASLRRAASLRRASYLRRAAILRRFSLVLRVEAGYDLHQLEFYK]
#
##gff-version	3
##query	GI11248%20[Drosophila%20mojavensis] 1 188
scaffold_6498	Scipio	protein_match	160235	160285	1.0	+	0	gene_id=kassiopeia_gene_id330847 GI11248 [Drosophila mojavensis];Query=GI11248%20[Drosophila%20mojavensis] 1 17
scaffold_6498	Scipio	protein_match	160304	160810	1.0	+	0	gene_id=kassiopeia_gene_id330847 GI11248 [Drosophila mojavensis];Query=GI11248%20[Drosophila%20mojavensis] 18 186
scaffold_6498	Scipio	protein_match	215708	216220	1.0	+	0	gene_id=kassiopeia_gene_id330847 GI11248 [Drosophila mojavensis];Query=GI11248%20[Drosophila%20mojavensis] 18 188
# protein sequence = [MVGSYADALKLGLNVKQPSGWPQQRMQQKQQKQQQQQIQRIQPQNMQQLQLQLLLQQQQVQQQQVQQQVQQQQQQQVQ
# QQVQQQQQQVQQQRQQVQQLLPTHQYLGARDNTSSIEKKLDQLIGLMLLERKHPNANANSNSIENANSAINKAIVNKLDRLIDMMSALTTCLSASISS
# SRQQIANETPNI]
#
##gff-version	3
##query	GI14082%20[Drosophila%20mojavensis] 1 2730
scaffold_6498	Scipio	protein_match	539838	540149	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1 104
# gap 105 112
scaffold_6498	Scipio	protein_match	540989	541150	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 113 166
scaffold_6498	Scipio	protein_match	541339	541480	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 167 213
scaffold_6498	Scipio	protein_match	545963	546104	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 214 261
scaffold_6498	Scipio	protein_match	546297	546497	0.997	+	1	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 262 328
scaffold_6498	Scipio	protein_match	546615	546916	0.997	+	1	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 329 428
scaffold_6498	Scipio	protein_match	548371	548594	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 429 503
scaffold_6498	Scipio	protein_match	549324	549726	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 504 637
scaffold_6498	Scipio	protein_match	549795	550552	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 638 890
scaffold_6498	Scipio	protein_match	552418	552462	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 891 905
scaffold_6498	Scipio	protein_match	552735	552857	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 906 946
scaffold_6498	Scipio	protein_match	552939	552998	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 947 966
scaffold_6498	Scipio	protein_match	553166	553264	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 967 999
scaffold_6498	Scipio	protein_match	554571	554885	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1000 1104
scaffold_6498	Scipio	protein_match	555000	555125	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1105 1146
scaffold_6498	Scipio	protein_match	555557	555766	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1147 1216
scaffold_6498	Scipio	protein_match	557225	557452	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1217 1292
scaffold_6498	Scipio	protein_match	560140	560313	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1293 1350
scaffold_6498	Scipio	protein_match	561133	561168	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1351 1362
scaffold_6498	Scipio	protein_match	562299	562331	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1363 1373
scaffold_6498	Scipio	protein_match	564550	564697	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1374 1422
scaffold_6498	Scipio	protein_match	565226	565599	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1423 1547
scaffold_6498	Scipio	protein_match	567248	567373	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1548 1589
scaffold_6498	Scipio	protein_match	567576	568275	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1590 1822
scaffold_6498	Scipio	protein_match	568361	568714	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1823 1940
scaffold_6498	Scipio	protein_match	579223	580775	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1941 2458
scaffold_6498	Scipio	protein_match	583040	584634	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1941 2472
scaffold_6498	Scipio	protein_match	584813	586356	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1941 2455
scaffold_6498	Scipio	protein_match	586616	588150	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1941 2452
scaffold_6498	Scipio	protein_match	588683	590232	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 1941 2457
scaffold_6498	Scipio	protein_match	597314	597370	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 2453 2471
scaffold_6498	Scipio	protein_match	598191	598335	0.997	+	0	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 2472 2519
scaffold_6498	Scipio	protein_match	599163	599794	0.997	+	2	gene_id=kassiopeia_gene_id333625 GI14082 [Drosophila mojavensis];Query=GI14082%20[Drosophila%20mojavensis] 2520 2730
# protein sequence = [MGVAEDFAPSFVKKPQLHQEDDGNRLIFECQLLSSPKPDIEWFRSDNKLTEDVRTKIKVQPIGDNKFTVVLELDDVVE
# TDAGLYKVKAKNKSGEVSASINLNFT........QIDGFAPTFAKKPAIRQEEDGKRLLFECRVNADPLPNITWFHNGTPVKESPRHKLTIDKDVHSY
# FATLEIQNVTVEDAGKYKVNAKNELGESNATISLNFDSDEAPVPESSDGIKPTFTERPVIRQSEDGGNVTFECRCVGEPTPTVTWSHGETVLTEGKRY
# KMSLTLDQKLYHMARLEISSVVSSDQGEYKALAKNKHGSGVATINLNFESGSKKIPDGKSPRFPKKPTIRQEEDILIMECILEAHPIPDIIWYCSDKQ
# ISDSHRTKMTRKAITKDSYILTLEIQNPTKDDGGNYRCNAINMYGESNANIALNFQGANDANGFAPSFIEKPRIIPNETGTLITMKCKCSAKPEPTVN
# WYRGQDLVEKSKKIKINSSVIAEDTYELTLEIKDPGATDGGTYRCNVKNEYGESNANLNLNIEAEPEPEGEGPTFVEKPRIISENNGKLVIMECKVKA
# DPKPDIVWFRNGEVIKENNKLKMSMESRGDHYYIKLELIDPQLEDSGLYKCNIRNTLGELNANLTLNIEIVPVIKDKPKIIKIIKKRTVVIECVVASK
# FEPKCTWYKESNTVKESKRHVYQVEKTKEGEFAVKLEINEVEDSDKGAYKLIASNEKGEAVSQVVNLVDIPEEERKPCKPEIVRKLVDQKVTESKTFE
# LIIILKQSDRKCKVEWYKSSTLIRETKDITTTFDGTTARLTFSSAKTEHTSNYKVIVTNEAGKDESTCKVTVEKKDKKKDEKAEKDKEEAEKKRKVIE
# KTLAKEVHEEQINIRTEQHQATVEKSLKQGAAEHIGLKKVERKASVESINEESKSEVRRKSIIKTTGEPSEEAINIVSRKSSIAAEESISESRRSSVV
# DRKALEQVESKNIEGKKNPQSINEEIPKLKPAEKRRVPKNVEEPKPVEEFPKLRKTSITQPKEEPKPEAVKPKAKAKPKAKPKYEELPEIPDYERPKL
# EKYEKSEFTPTDFTRELEIPNKMEKPVIENAKKSAEIVPQKNGLPKKSEAIEKPAEEPKILKMGKGKLPDDEDTRDGATLKPVIVEPESPLLNIKSKS
# SQAVKPSLMDIIKQRRRSSVRALMTKEPIQNESFLGVVLKPVIKDAKEQVAPQQAKQLHKANATEEFNPTKTSKAHISDLKKPEAIATIVDDYERSQL
# EKYERIDIETLKPEKLTPVVNTPDQDPPEVKLTATNQKDDKPKVPKMQPPAPGEPPKIEVIREKRPSLAPEPPSRRGSLVPPADTGRRPSLIINDEKK
# LRPGEVMDTRLLRPGEVGEGQRRRPSIDVRRPSVQDLEDLINKPSTPLRDVGDGGPPSITDVQESYSVVEDSTAYLTVTIEGNPAPTFKFYKGVSEIL
# EGGRYKFLTDGQSNSITLCMRKCKPNDEGKYKVVVSNIHGEDSAEMQLYVSDSSGMDFRAMLKKRRYQKWDKEEQDPNWGDLKETEKPLPALKKVERK
# VESFLSPLIDQFAKEGKDKKVVFEARFSKPNCKPKWLFRKDEVFTGSKFKFKQENDTYQLIITAPKVEDTGKYTIEIGGVSSTAFLNVEEADPTYTFT
# KPLKKKLEGFTEHETTLECAVSSSMANVHWFKDNKKIESDDPRFLISKDINGNLKLIIKDSLLEDSGQYRCQLDKQPDKTETTLKIVEYPYKFVKVLK
# SQQCIEKDTITLACEIDDAQGEVQWFRNNEEIKPDKRIQILKDGRKRKLVIKDCKVTDAGQFKCTTNADKTEAEIIINYQNRFNKKLKDTDAVEREKL
# VLDVELQDQTAPCDWKFNGEPIVPNERIEVKNLGGGKHQLVFNNLELSDAGEITCESGQLNSTCKLSVRQGESRPNIDCPDKFAGPISAPVIVEVPFK
# VNAAGNGKPSEPSSTLNARPMREKPKLHLDGLLGRRIKVRAGEPVSVHIPISGAPTPTVEWKRGDIKLSDGSKISFDTNTERTIFRIDDSTRKDSGVY
# KITVSNEFGKESADIEIIVVDKPGPPEGPLTYTEIAPDHISLQWNLPTDDGGSDITGFIVEFTEFGVDDWKPVPGYCPKTNYTVKGLTEGKKYLFRVT
# AENIYGISDALEGKPVVAKSPFDPPGSPTQPQVVGYTPSSASLEWHPPDYCGGKPISGYIVERRERGGEWIKCNNYPTPNTSYTVPDLREGSRYEFRV
# TAVNEAGPGSPSKPSDLMSAELQRYRPDPPEPPKADRITRDSVTLSWRPPRNDGKSKIKGFYIEQRPKNSKDWKPINDIPINSTVFTVPDLKEGEEYS
# FRIIAENDVGRSDPSKPSQPIQIEEQPNKPCMDLGGVRDIICRAGDDFSIHVPYVAFPKPTAFWYSNDIVLDDDQRVHQHLTDDAASFVVKNSRRSDS
# GQYRLQLKNPHGYDTATINVKVENGLHLSRPNLHTTSFTQEMVTNSNSTTSTSSSSTQNSISGKKKYATSSLQAPGSPSRSRSATKELIPLDKQSSKR
# QATGSDKPPKIVSHLESRFVKDGDAVTLACRIIGADHFDVVWLHNNKEIKPSKDFQYTNEANIYRLQIAEIFPEDGGTYTCEAFNDAGESFSTCTINV
# IVPGDDPKQPTFVQFPVSVSVTEGEDAHFECEFDGELINLAWLKDGKPIDEARTRYSFTKDGNRYKFTVNKCTLDDVGQYQAKALSKKGETLSAFSVN
# VLSSDA]
#
##gff-version	3
##query	GI14112%20[Drosophila%20mojavensis] 1 655
scaffold_6498	Scipio	protein_match	1485737	1485808	1.0	+	0	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 1 24
scaffold_6498	Scipio	protein_match	1488032	1488085	1.0	+	0	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 1 18
scaffold_6498	Scipio	protein_match	1489305	1489529	1.0	+	0	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 25 99
scaffold_6498	Scipio	protein_match	1489606	1490229	1.0	+	0	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 100 307
scaffold_6498	Scipio	protein_match	1491900	1492693	1.0	+	0	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 308 572
scaffold_6498	Scipio	protein_match	1493434	1493683	1.0	+	1	gene_id=kassiopeia_gene_id333655 GI14112 [Drosophila mojavensis];Query=GI14112%20[Drosophila%20mojavensis] 573 655
# protein sequence = [MGENVKVIVRCRPLNQKEIDSKCDTILETGDYTVAVVNPLVRSAPKKIFQFDSVYDGLSKTDKIYNDMCYSLVESTLE
# GYNGTIFAYGQTGCGKTHTMQGEGYSGAVDSCGIIQRCFDHIFETISIATSVRYLALVSYLEIYNENIRDLLSANESIGIRNHVLKDIPGVGVTVPTL
# TSQAVMNATDCYNWLNVGNKNRITAATLMNEKSSRSHTIFTISLEQIQESSTVGDSPRTPVIGGIRRGKLNLVDLAGSERQCKTGAFGERLKEATKIN
# LSLSALGNVISALVDGKTKHVPYRDSKLTRLLQDSLGGNTKTLMIACISPAASNYDETLSTLRYACRAKNISNAPRINEDPKDAQLRKYQEEILNLKR
# MLDESQQHESVVLHKFVEDNNKQKELWLEEAKVKVRQQMIDEMKDVPPVAKSEQSNEAINEDFQLHARKRIDLIKQALIGGERVDDLQLQERHRMRKL
# EAKRHLSAIAHALSRVESEDRDLLQDHYASIQQEINMKNERIKKYAQKIKMLEREVSDLNSEFQMDREDYLDEIRQLGRHLKFYQLLFCKAQPILRKT
# GRNWNAEHILENSLWNDDLKTWKLPNDIENNLKLPPANLRSPFHKQNVFDNKNLNSYLEDVYNRRDSIEFEDSTVSIYIYIYIYIHV]
#
##gff-version	3
##query	GI14114%20[Drosophila%20mojavensis] 1 877
scaffold_6498	Scipio	protein_match	1506601	1506765	1.0	+	0	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 1 55
scaffold_6498	Scipio	protein_match	1506863	1506911	1.0	+	0	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 56 71
scaffold_6498	Scipio	protein_match	1515112	1515209	1.0	+	2	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 72 104
scaffold_6498	Scipio	protein_match	1525733	1525844	1.0	+	0	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 105 141
scaffold_6498	Scipio	protein_match	1533382	1533469	1.0	+	2	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 142 171
scaffold_6498	Scipio	protein_match	1533690	1533770	1.0	+	1	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 172 198
scaffold_6498	Scipio	protein_match	1533843	1533992	1.0	+	1	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 199 248
scaffold_6498	Scipio	protein_match	1541011	1541203	1.0	+	1	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 249 312
scaffold_6498	Scipio	protein_match	1541682	1541847	1.0	+	0	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 313 367
scaffold_6498	Scipio	protein_match	1543693	1543852	1.0	+	0	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 313 365
scaffold_6498	Scipio	protein_match	1545822	1545891	1.0	+	2	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 368 391
scaffold_6498	Scipio	protein_match	1552560	1554018	1.0	+	1	gene_id=kassiopeia_gene_id333657 GI14114 [Drosophila mojavensis];Query=GI14114%20[Drosophila%20mojavensis] 392 877
# protein sequence = [MPHTHTRHGSSGDDLGSTDEVKIFKDEGDREDEKISSENLLVEEKSSLIDLTESEEKGSKTVTRPDHSPVFNKLEPHT
# PTFNMGYLVSPYSYANGTPGGLPVTMANKIGLPPFFCHNGDPLTTPPPAHCGIPPYQLDPKAIGLTRPALYPFAATQYPYPMLSPDMSQVASWHTPSV
# YSASSFRTPYPSSLPINTTLPSDFPFRFSPSLLPSVHATSHHVLNSHPAIGASTTKQDCGVQDSTTNNRYSRNLDTKGSSNSQANDCKDSSNDKKKPH
# IKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVSKKKKRKKDRSTSDSGGNNMK
# KCRARFGLDQQNQWCKPCRRKKKCIRYMEALHGDGHEEGSGMDDTGNLSQLSDDDDDDDEDLLVSGGAGMGSSGSGDEMIDMNQDKLADNEDTESMSQ
# SLSSPGCLSGLSSLQSPSTTTSLASPLNMNMLTSPMTPVINTTTNTSNNNSNAGPLSVINSSSTEQQTASASSQLLISASGSGSISGSGTGTGTGSGL
# GSGTGSGLGSVSSCSIGSTCSISNSTPNTSSTVSSSIAATPNAANERAMMLRNRFSHLGMGLNPDQLFPAVSATVSSSPSTITAISLATNSFNCYSNA
# GMKATSVTIAAATPASVSVSGPISVSAPASTPPSLPAISLHRNPIGANPRDINNPLSINQLTKRREDNNVALLETQSVSAALAHNPYTHSHSPHPHPQ
# PHSQPPPLTHPHLHPHADQHPHPHPHPHPHPHHSLFSSSSFSQHFQQRLSNHLAATNSSRLSNSSNINIGPVAQSSSDAPTLIIKRRNTSDPPPATGN
# SATPTSTETGAISVS]
#
##gff-version	3
##query	GI20521%20[Drosophila%20mojavensis] 1 1079
scaffold_6500	Scipio	protein_match	27704059	27704181	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 1 41
scaffold_6500	Scipio	protein_match	27702820	27703190	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 42 165
scaffold_6500	Scipio	protein_match	27702552	27702757	1.0	-	1	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 166 233
scaffold_6500	Scipio	protein_match	27702340	27702476	1.0	-	2	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 234 279
scaffold_6500	Scipio	protein_match	27702089	27702222	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 280 324
scaffold_6500	Scipio	protein_match	27701827	27701960	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 280 324
scaffold_6500	Scipio	protein_match	27701104	27701735	1.0	-	1	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 325 534
scaffold_6500	Scipio	protein_match	27700821	27701041	1.0	-	2	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 535 608
scaffold_6500	Scipio	protein_match	27700351	27700762	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 609 745
scaffold_6500	Scipio	protein_match	27699854	27700293	1.0	-	2	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 746 892
scaffold_6500	Scipio	protein_match	27699226	27699786	1.0	-	0	gene_id=kassiopeia_gene_id339877 GI20521 [Drosophila mojavensis];Query=GI20521%20[Drosophila%20mojavensis] 893 1079
# protein sequence = [MLHKFGGCLAIIYLSSFIVHHVETRNIRSEKSDAAAQCGYTSCHPTKPNMLNVHIVAHTHDDVGWLKTVDQYYYGSET
# LIQKAGVQYIIDSVVESLLKDPNRRFIYVESAFFFKWWKEQTKEQQDNVKMLVNEGRLEFIGGAWSMNDEATTHYQSVIDQFAWGLRQLNDTFGQCGR
# PRIGWQIDPFGHSREMASIFAQMGFDGMFFGRLDYQDKDERLMTQKAEMIWHGSANLDEKADLFTGALYNNYQAPAGFCFDILCADQPIIDGKHSPDN
# NVKERIDTFFEFVTKMAKGYRTPNLLITMGEDFHYQNADMWYKNLDKLIKYANERQANGSNINLLYSTPSCYLKSLHDAGISWPTKSDDFFPYASDPH
# SYWTGYFTSRPTLKRFERDGNHFLQACKQLSALAPKRSAEFDPHLNFMRETMGIMQHHDAVTGTEKQKVALDYAKRMSVALRACSTNIRSVLNQLSIS
# SDRVSPQPTKFEFKTCTLLNISSCATSELNDRFALTLYNPLAHSTNEYVRVPVTDYKYVVIDPTGKSLSTQVVPVPKAVTNLQHRNSSAQYELIFLAS
# NLPAVGYKTYYIEKSDSIPVSGKPSPSPRKKSSYTVIGNKNIKLTFDTNGFLVYVTADGMTRPISQEFLYYIAATGNNEEFLNRSSGAYIFRPDKNQI
# RFATDEVSIEVYKGQLVQEVHQQFNSWISQVVRVYKQSNHAEFEWLVGPIPIKDNIGKEVISRFTSDIKSDSIFYTDSNGREMLKRRRNHRETWNVKI
# HESVAGNYYPVTTKIALEDDTARMAILTDRAQGGSSLEDGVLELMVHRRLLHDDAFGVGEALNETEYGEGLIARGKHHFFVGKSLQRPEVSLKAIERL
# VQLETLLPSWKFFSNVSYSSDQWLTAFTNTYNGISAALPKYVHLLSLEPWHEKELLVRFEHILEKTDDTRHPQYVQFNIKDVLSAFNIENIRETTLDG
# NAWLDEHRRMEFVPDPEDEAYNNYGTFKKSSKAVHLLSAEKPMLETRYSKETLEAGQLGAESNRIKRSADSRHFTIHRRRPQETSSDDLKKSMPSSER
# EKYLIELSPMEIRTFIVYLEK]
#
##gff-version	3
##query	GI20998%20[Drosophila%20mojavensis] 1 527
scaffold_6500	Scipio	protein_match	26410773	26411825	1.0	-	0	gene_id=kassiopeia_gene_id340343 GI20998 [Drosophila mojavensis];Query=GI20998%20[Drosophila%20mojavensis] 1 351
scaffold_6500	Scipio	protein_match	26410374	26410633	1.0	-	0	gene_id=kassiopeia_gene_id340343 GI20998 [Drosophila mojavensis];Query=GI20998%20[Drosophila%20mojavensis] 352 438
scaffold_6500	Scipio	protein_match	26409718	26409812	1.0	-	1	gene_id=kassiopeia_gene_id340343 GI20998 [Drosophila mojavensis];Query=GI20998%20[Drosophila%20mojavensis] 439 469
scaffold_6500	Scipio	protein_match	26409634	26409701	1.0	-	1	gene_id=kassiopeia_gene_id340343 GI20998 [Drosophila mojavensis];Query=GI20998%20[Drosophila%20mojavensis] 439 460
scaffold_6500	Scipio	protein_match	26408195	26408367	1.0	-	2	gene_id=kassiopeia_gene_id340343 GI20998 [Drosophila mojavensis];Query=GI20998%20[Drosophila%20mojavensis] 470 527
# protein sequence = [MLKSSTNPQELRLPRPEEHHQPHPHTQQGQPTHQVAAVIANNITSAAAAAAAAAAAAAAAGGGGSAVVPTSHSMDTLK
# TTFLPNLSMDPNVISPHYCPMCHQQFERIQHAAEHMQLCHGISLNAQSALIEQQQQQHQQQQQQQQQQQQQQQQQLKPLSYACPNCDDKFASALEVDE
# HHRLTHQTAFLARCIVCSVYGVNSVTQNPNEYKCAHCGNVFNAAMLATGQQAFMDHQEAPVTPDEMPAIAPRDMRLTPEEQQHQQQQQQQQQQQQQQQ
# QQQQQQQQQQVQHHQQDHHHQQLEQQQQQQQQEQQRQRELQEQQHQEDLSDPSTQKVPPLTVKLLKNGTGATVAHPQVIIKEEPLSLSDSGDVVNSVP
# VYAIQANPGVQPAGTTGAATSVLVSTQSVPADLAHKIRHKCPDCPKTFKTPGTLNMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTG
# EKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALTVHTTKLHPL]
#
##gff-version	3
##query	GI21963%20[Drosophila%20mojavensis] 1 261
scaffold_6500	Scipio	protein_match	23050460	23050700	1.0	-	0	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 1 80
scaffold_6500	Scipio	protein_match	23044292	23044343	1.0	-	2	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 81 98
scaffold_6500	Scipio	protein_match	23034625	23034688	1.0	-	2	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 81 102
scaffold_6500	Scipio	protein_match	23033809	23033860	1.0	-	2	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 81 98
scaffold_6500	Scipio	protein_match	23033289	23033538	1.0	-	1	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 103 185
scaffold_6500	Scipio	protein_match	23032992	23033219	1.0	-	0	gene_id=kassiopeia_gene_id341261 GI21963 [Drosophila mojavensis];Query=GI21963%20[Drosophila%20mojavensis] 186 261
# protein sequence = [MKQGSATSGTNNNNSFANTIINDNNNTDCEEQLQPPQQLSKLTHIVSEWDDGIIFDVDDPDFCPGPSNVVVDRLTTAT
# NSSATMSSASVHAPQIADICSPLSHHSLGLSASLPDLVGSPLEINMDSVLTIEELRQHLGSCFTCGVSWTDDHVSLDCSECGGYSLERPCPLCDGQCG
# VQWKRDFAMSHACSKARWVGVCLSFPEAMAAAVQQLPVANNVAATTATSCAAAAANQLRLAQELCSRLEQLSTASSSAPNKMTRL]
#
##gff-version	3
##query	GI24062%20[Drosophila%20mojavensis] 1 146
scaffold_6500	Scipio	protein_match	17643873	17643977	1.0	-	0	gene_id=kassiopeia_gene_id343320 GI24062 [Drosophila mojavensis];Query=GI24062%20[Drosophila%20mojavensis] 1 35
scaffold_6500	Scipio	protein_match	17643641	17643802	1.0	-	0	gene_id=kassiopeia_gene_id343320 GI24062 [Drosophila mojavensis];Query=GI24062%20[Drosophila%20mojavensis] 36 89
scaffold_6500	Scipio	protein_match	17642009	17642113	1.0	-	0	gene_id=kassiopeia_gene_id343320 GI24062 [Drosophila mojavensis];Query=GI24062%20[Drosophila%20mojavensis] 1 35
scaffold_6500	Scipio	protein_match	17641777	17641938	1.0	-	0	gene_id=kassiopeia_gene_id343320 GI24062 [Drosophila mojavensis];Query=GI24062%20[Drosophila%20mojavensis] 36 89
scaffold_6500	Scipio	protein_match	17641553	17641723	1.0	-	0	gene_id=kassiopeia_gene_id343320 GI24062 [Drosophila mojavensis];Query=GI24062%20[Drosophila%20mojavensis] 90 146
# protein sequence = [MSDMSELTFTREGDKLAVSGNASFKWNIQPGDRVLLFKFDRINWVQTPFGMTVTDICPILYDEPQYWYKYWTQFITNK
# EDVKDECIYPGTKFIYEPFVINLIFDMTGLPLHGRHKIVVTIRAFSWMNVERESSICIELLGEFERLS]
#
##gff-version	3
##query	GI10322%20[Drosophila%20mojavensis] 1 1576
scaffold_6500	Scipio	protein_match	15766892	15767113	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1 74
scaffold_6500	Scipio	protein_match	15716355	15716423	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 75 97
scaffold_6500	Scipio	protein_match	15708758	15708826	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 75 97
scaffold_6500	Scipio	protein_match	15689345	15689410	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 98 119
scaffold_6500	Scipio	protein_match	15688292	15688865	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 120 310
scaffold_6500	Scipio	protein_match	15680088	15680398	1.0	-	2	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 311 414
scaffold_6500	Scipio	protein_match	15677592	15679997	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 415 1216
scaffold_6500	Scipio	protein_match	15677398	15677532	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1217 1261
scaffold_6500	Scipio	protein_match	15677191	15677330	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1262 1308
scaffold_6500	Scipio	protein_match	15676968	15677117	1.0	-	1	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1309 1358
scaffold_6500	Scipio	protein_match	15676791	15676902	1.0	-	1	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1359 1395
scaffold_6500	Scipio	protein_match	15676280	15676592	1.0	-	0	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1396 1499
scaffold_6500	Scipio	protein_match	15675670	15675899	1.0	-	2	gene_id=kassiopeia_gene_id329942 GI10322 [Drosophila mojavensis];Query=GI10322%20[Drosophila%20mojavensis] 1500 1576
# protein sequence = [MSTTTITATATTTAAAASAANAASTSAASPPPNVSGGRIADCRKFSPNIFNKSKCSHCFRQREEHSAAALECNRVSKC
# GYLFVAPDWDFSNPLYRTKRWQRRWFVLYDDGELTYSVDDYPETIPQACIDMTKVLEVSSAEEVTGHPNSIAITAQDRVTFVKGISPDESQWWLNILT
# AFPKSKGRHKRSTTLPGGQISCLRQSSNVDMAIKLGNRHSSYHKDTLTSSQSAGNLLCNLEDSSSTNNVGLTVSAMANDDADDGVETGEDEEDEDENR
# ERQVSTSRKTKATSPSSCHGGQDENNRNAGNEITNRVSQPTGCLLIEDIRRDEKSIKDIANTITNLSQQQNKRWSTAVNNALNNHHYPYQTSRDETDF
# QVTSSGKGEQTTGNLRPKSLPLAANSTPAIVSAIVKKIPTVLQVESAKSGKAGSRLQLQLKPAKHYQHERGDPDGGCNLDELCANYLAKSDELRPLNK
# SSKCTVSGKSSSAKSLKESLNAKKGWLMKLDNRTGEWSKHWFTLSGAALFYYRDPLCEERGVLDGVLDVNSLSNVVEEPSVSKQHAFQLITWDKQRLF
# LAGLSPSSRNTWLAALRSAAGLPQLLETTAATVSPTAMKPSDIEQDFMKAQLQTNPLGSSPATPGTPANAPHFSSDEEYRTASEGGRRDSLDWGSPLS
# PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRSTVDSVASDELPLMAVPEEMRPDRDRDRDRDRDRDRELKQQCETLRTEAKVREARMSELLSTLQRTE
# QELTARLQEQQQQLNAELNSAKQSAAELVHGLSVQLTESQCKIKQLEDRLAQGIEENESLYKRLRELQAGNSQVASLSNLQRHKMKRMDSLSDLTTIS
# DIDPYCLQRDSLAEEYNELRSRFEKAVNEIRAMKRELKQSQNQYDALELIQTALQQKLERSQMEDGAQLQLMAARIQDLTIKYSTSERQVRALKQKLA
# KSERRRSLSLKGKEQLELKLSELQRETVERQSTPSTNPSTTESSSESSSQSSPLNAHLLQRLHSLEHVLLSSKERLEQSVTQLQHLRAGHRSRRSVSP
# LNERKDGLRQLERALTETCVLVSEQMELSCLQDSCHKCCELRQRIDKLTALHQQTETDLQRSEQLLEQRESELAAALEKCVSQEQEQQLLLKQRNELS
# DELGQQQERCKRMEKRLDLLEKEHGKQLECLREVYSHEHANAPDELSFRKRYQTEIEQLRTLCEKGLSAMESSHRRLICDMEEKHKQEIERLLAEKET
# ALAEETQATLAALDAMRKAHQSEVQREVARFKAEFLRQVQRGEHIRGDGAKLKEEELDELRMEILSFSEKYSIKCVENAALEEKLHQANGKLRHFQQM
# QQLELRNRQFRAHLASEDPGSDVHFVQGLTTGSKEDAACQDSESPPQIMVDTDTTRITSTTTTTTATTTASLDPDTDPVTASREPDKMEQNQFVIPSH
# KLSRCQTSSATNISDSGNDIDTADIELAYEPCYKPYDIFAIYQNRLCFQGLKGNSTFGKKLRKSTAKTTSPASSTTASATTTAAANNINLPNSKGSSH
# KRTYKTAAVINIQQQHNPDNELQQEKAQ]
#
##gff-version	3
##query	GI12187%20[Drosophila%20mojavensis] 1 668
scaffold_6500	Scipio	protein_match	11177249	11177923	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 1 225
scaffold_6500	Scipio	protein_match	11176168	11176794	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 1 209
scaffold_6500	Scipio	protein_match	11175925	11176116	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 226 289
scaffold_6500	Scipio	protein_match	11169052	11169243	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 226 289
scaffold_6500	Scipio	protein_match	11167341	11168240	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 290 589
scaffold_6500	Scipio	protein_match	11163430	11163492	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 590 610
scaffold_6500	Scipio	protein_match	11163259	11163348	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 611 640
scaffold_6500	Scipio	protein_match	11163111	11163194	1.0	-	0	gene_id=kassiopeia_gene_id331768 GI12187 [Drosophila mojavensis];Query=GI12187%20[Drosophila%20mojavensis] 641 668
# protein sequence = [MRLLKFLHYQRYLGLNNLDYSTVSRHYILKGSCVSHMLHLLVQAVLIACVLATFMQWSVNYQATDSRTGDNFDHLVIL
# AASFTQLISNAWMRLHQQMQLKLLNRLSHVATSLRAVQLEKIRARWLYYLWLAICLYYALDIVFFVVFDMDMKRDNLIFLLGFYVRLVCANFIIICYS
# SLVCLVKHLFRAQAAQLQRQLRNDRICLRHIANNLKLNDELMLLCQDDLIVEVFGGSLVFLFLYTVLDAICTCYLASLEERFSFVEVLFVLCWIVPIF
# MSLIIPLTANNLTKQYKPMELYPYYCTCRYLGIFCIEYDYQMGRFRLRRSIIFYLIHLVVQMYLISCMVILVCFWTFHFTDEMTATGNHYERLVLLLA
# MIIQFVQNTWLFLLQKLQIHIVRQVELYKSKYLTGLRLRLPQRLFLALVFANIIYFSNFLNVCISDWLTHISIMFRISTIGFFWRAMTSSFIQGTYIS
# LIHVIRHLLKSNQAQLTVLVHQLQQPKRNCGDILRLRACLDMHDRLLILCTDEVSVVYGFSIWLCMLFSSLDSTNTLYITMLTDTGKSLYENILRSII
# WLSPTIMTAATALMSDTVHVQANKTAKILAKIPRTGSGLDKMVEKFLLKNLRQQPILTAYGFFALDKSTLFKLFTAIFTYMVILVQFKEMENSTKSLQ
# KP]
#
##gff-version	3
##query	GI12934%20[Drosophila%20mojavensis] 1 279
scaffold_6500	Scipio	protein_match	9285269	9285323	1.0	-	0	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 1 18
scaffold_6500	Scipio	protein_match	9272200	9272257	1.0	-	0	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 1 19
scaffold_6500	Scipio	protein_match	9238655	9238866	1.0	-	2	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 19 89
scaffold_6500	Scipio	protein_match	9236143	9236278	1.0	-	0	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 90 134
scaffold_6500	Scipio	protein_match	9235944	9236077	1.0	-	2	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 135 179
scaffold_6500	Scipio	protein_match	9235729	9235851	1.0	-	0	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 180 220
scaffold_6500	Scipio	protein_match	9235481	9235657	1.0	-	0	gene_id=kassiopeia_gene_id332501 GI12934 [Drosophila mojavensis];Query=GI12934%20[Drosophila%20mojavensis] 221 279
# protein sequence = [MKLCQVFIICVACLTTLPDLAVGLRNVNVHIPSAVKRGDNALLICNYDIENDTLYAVKWYRGRREFYRYTPKEKPAWK
# IFTKTNEIDVVTTQSNASHVLLRNVPTSISGKFACEVSADAPTFDTSIVAADMEVVELPAQRPIITGIHSRYRLGDIINGNCSSDYSKPAANLTWWIN
# DIQVPPNYLRTYDIQRHLAEHLESSVLELNFVVTTHHFIKGRLKLKCSARIHDIYAQESEKLIEEDRPRILASGRSPDMNMYPFDQPGDVDEHNELYL
# IHKSE]
#
##gff-version	3
##query	GI14192%20[Drosophila%20mojavensis] 1 561
scaffold_6500	Scipio	protein_match	5701578	5701921	1.0	-	0	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 1 115
scaffold_6500	Scipio	protein_match	5701366	5701494	1.0	-	1	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 116 158
scaffold_6500	Scipio	protein_match	5701213	5701304	1.0	-	1	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 159 188
scaffold_6500	Scipio	protein_match	5701106	5701158	1.0	-	2	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 189 206
scaffold_6500	Scipio	protein_match	5699234	5699286	1.0	-	2	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 189 206
scaffold_6500	Scipio	protein_match	5696578	5696686	1.0	-	0	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 207 242
scaffold_6500	Scipio	protein_match	5696370	5696513	1.0	-	2	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 243 290
scaffold_6500	Scipio	protein_match	5696000	5696310	1.0	-	2	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 291 394
scaffold_6500	Scipio	protein_match	5695662	5695934	1.0	-	0	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 395 485
scaffold_6500	Scipio	protein_match	5695371	5695598	1.0	-	0	gene_id=kassiopeia_gene_id333735 GI14192 [Drosophila mojavensis];Query=GI14192%20[Drosophila%20mojavensis] 486 561
# protein sequence = [MTATKDPKDQVPKTTTQPAQKNGAAGGLMKRLRRSASVTEHNLNNLRNRNSTQHLFDQHGNPIDLRQYRKVLDKDENG
# NGTSEKKLRYRRTQSVTRAEEISNKEAKLRKAQPDRSIHRPRDSLFSWSSGFTNFTGLVNWGFLLLCIGGLRLGLENLIKYGIRINPIDWYFFVSGRD
# QGEGHNALFLVLYSFVHISLCLAVEKGLALEIISEGLGMVIQIANIIFSVLLPVVIIHLKGSAFSIMGATSVCFYYSVLFLKLWSYVQTNMWCRKTYY
# QRQPRERRPSITVAELKRKHSTGGEDDEDVAKLVQYPENLCYKDIMYFLCAPTLCYELNFPRTSRVRKRFLLKRLLEVLIGVNVLMALFQQWIIPSVR
# NSLIPFSNMDMALATERLLKLALPNHLVWLIFFYLLFHSFLNAIGEVLYFADRNFYCDWWNANNIDTFWRTWNMPVHRWCVRHLYIPVVQMGYSSRQA
# STIVFLFSAFFHEYLVSVPLQTYKIWAFLGMMGQIPLSAISRYVERRLGPRMGNIIVWASIILGQPLCIMAYYHDYVITHYQNALNGTEHR]
#
##gff-version	3
##query	GI14231%20[Drosophila%20mojavensis] 1 148
scaffold_6500	Scipio	protein_match	5541490	5541544	1.0	-	0	gene_id=kassiopeia_gene_id333773 GI14231 [Drosophila mojavensis];Query=GI14231%20[Drosophila%20mojavensis] 1 18
scaffold_6500	Scipio	protein_match	5539387	5539441	1.0	-	0	gene_id=kassiopeia_gene_id333773 GI14231 [Drosophila mojavensis];Query=GI14231%20[Drosophila%20mojavensis] 1 18
scaffold_6500	Scipio	protein_match	5538497	5538670	1.0	-	2	gene_id=kassiopeia_gene_id333773 GI14231 [Drosophila mojavensis];Query=GI14231%20[Drosophila%20mojavensis] 19 76
scaffold_6500	Scipio	protein_match	5538214	5538428	1.0	-	2	gene_id=kassiopeia_gene_id333773 GI14231 [Drosophila mojavensis];Query=GI14231%20[Drosophila%20mojavensis] 77 148
# protein sequence = [MQYLYVISALILAIAVQQGVAIKCFVCNSHKDANCALDIPPDNLLKDCQEDYSSRDRGIPTYCRKITQIIEFSVNSLP
# PDSRVIRTCGFQNQTSTNYCYQRAGFGGRQVVCSCDTDNCNGSASLSGISGLGLLATVGLLLGVCKWLQR]
#
##gff-version	3
##query	GI14486%20[Drosophila%20mojavensis] 1 589
scaffold_6500	Scipio	protein_match	4046217	4046349	1.0	-	0	gene_id=kassiopeia_gene_id334021 GI14486 [Drosophila mojavensis];Query=GI14486%20[Drosophila%20mojavensis] 1 44
scaffold_6500	Scipio	protein_match	4045691	4045735	1.0	-	2	gene_id=kassiopeia_gene_id334021 GI14486 [Drosophila mojavensis];Query=GI14486%20[Drosophila%20mojavensis] 45 59
scaffold_6500	Scipio	protein_match	4040650	4040694	1.0	-	2	gene_id=kassiopeia_gene_id334021 GI14486 [Drosophila mojavensis];Query=GI14486%20[Drosophila%20mojavensis] 45 59
scaffold_6500	Scipio	protein_match	4036161	4037749	1.0	-	2	gene_id=kassiopeia_gene_id334021 GI14486 [Drosophila mojavensis];Query=GI14486%20[Drosophila%20mojavensis] 60 589
# protein sequence = [MVMSELHWRTASPEDNNNSLKHDLLKANNNNARDVAAVHMMQNRYISRLSRSPSPLQSNASDCDDNNSSVGTSSDRCR
# SPLSPALLLTQQQAKRQLLSMQPHPAHHHHHNHNHTHNHNHNHLQQTYKQEQQDEDYDDANGGALNLTSDNSRHSTQSPANSVKSTAGTPPAQLTAPL
# VSPVLPPTVAAPTSMAAAAAAAAAVANSMQPGLGFALPGLSSPQLAAAGLALNPLLAGSISQQDFSQLQQVLQQRQVALQQQLNSYIELLRSGSLGLS
# QDDPALAGQIAAAQFLMQSQLQALSQATQQLQALQKQQETLSMCKSPLQQPRSSTPHSRSPAAVRSPASSPHQPLQITPPNSAASLKLSGMLTPSTPT
# SHSHTHGHAHTHSQVTPQPKTVASAAAARAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
# LKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFMANQKPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKR
# INPSLDSPTGADDDESSYMLH]
#
##gff-version	3
##query	GI14505%20[Drosophila%20mojavensis] 1 1808
scaffold_6500	Scipio	protein_match	3914913	3914960	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1 16
scaffold_6500	Scipio	protein_match	3914539	3914844	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 17 118
scaffold_6500	Scipio	protein_match	3913268	3914473	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 119 520
scaffold_6500	Scipio	protein_match	3913069	3913206	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 521 566
scaffold_6500	Scipio	protein_match	3912771	3912917	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 567 615
scaffold_6500	Scipio	protein_match	3912450	3912596	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 616 664
scaffold_6500	Scipio	protein_match	3911315	3911399	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 665 692
scaffold_6500	Scipio	protein_match	3910421	3911240	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 693 966
scaffold_6500	Scipio	protein_match	3909996	3910360	1.0	-	1	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 967 1087
scaffold_6500	Scipio	protein_match	3908832	3908963	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1088 1131
scaffold_6500	Scipio	protein_match	3906954	3907094	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1132 1178
scaffold_6500	Scipio	protein_match	3905998	3906221	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1179 1253
scaffold_6500	Scipio	protein_match	3905524	3905671	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1254 1302
scaffold_6500	Scipio	protein_match	3904776	3904996	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1303 1376
scaffold_6500	Scipio	protein_match	3904249	3904469	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1303 1376
scaffold_6500	Scipio	protein_match	3903496	3903716	1.0	-	2	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1303 1376
scaffold_6500	Scipio	protein_match	3902309	3902526	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1377 1449
scaffold_6500	Scipio	protein_match	3901742	3902248	1.0	-	1	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1450 1618
scaffold_6500	Scipio	protein_match	3901298	3901679	1.0	-	1	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1619 1745
scaffold_6500	Scipio	protein_match	3900957	3901145	1.0	-	0	gene_id=kassiopeia_gene_id334035 GI14505 [Drosophila mojavensis];Query=GI14505%20[Drosophila%20mojavensis] 1746 1808
# protein sequence = [MGDITPMDEFCGSTFWDVNATWWTVDPDFTICFEQTVLVWAPCAFFWAFVLIDFWYLKASLDRNIPWNKLNIGKVLFN
# VGLIIITALDLIMALVKKGEADIPMYPVDIWTPVIKLATFIMLLIFIPLNRKYGVQTSGCQFLFWFFLVIFSIPRCRTEARMHQERSDIINSQNATPH
# DFSWETYQFCSFFIFFTLSVLMLILNCFGDQLPRQTKYKRGPKEIPELSASFLSRITYSWFDKMALKGYRNPLEEEDLWDLRPQDSCKEVMPTFAYYW
# NKNVRKNYRRMANAQETKAQFSNGKVSFENPQKNGKKKGMASIMPPIYKSFGGIFLFGSFFKLITDVLTFAQPQVLSLIIGYVEDYQTNPQPEWKGIM
# YSILLFVLASAQTFILAQYFHRMFIVGLRIRTALINCIYRKALRISNAARKSSTVGEIVNLMAVDAQRFMDLTTYLNMLWSAPLQIALALYFLWQQLG
# PSVLAGLAVMVIMIPLNGFIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLGIRDKEIATLRATAYLNASTSFLWSCAPFLVS
# LVTFATYVLSDEANQLSVSKALVSISLFEIMRLPLAVMPMLMVDIVEVSLVTFATYVLIDENNVLDAKKTFVSLSLFNILRFPLTMLPMLITNLVQTQ
# VSVKRINKFLNSEELDPDNVQHDSSKPHPMSIENGHFSWGDEDELTLKNINMEVRKQNLVAIVGTVGSGKSSVIQAFLGEMEKISGTVNTVGKMAYVP
# QQAWIQNATVRDNILFGKAYDRKRYNQVIDACALRTDIEILSAGDRTEIGEKGINLSGGQKQRISLARAVYSNADLYLLDDPLSAVDSHVGKHIFEEV
# LGPKGMLAKKTRVLVTHGITFLPQADNIYVMKMGEISESGTYSELLRNRGAFADFLMQHLQEGEAEAEEIDQIKRQLSQTDPALIAPFEKAILLARTE
# SLSDSISVTSADSLMGGSLRRRNKRQDSYDSTASAASLKKKQELEGKLIEIEKSQTGGVDFSVYKHYIKSVGIFLSVATLVLNLVFQAFQIGSNLWLT
# QWSNDKEVEHNTDKRNMYLGVYGAFGFGQVGLTYFASLCGSLAGLQCSRTMHNVLLHANLRWPMELFDTTPLGLLSRYLAGLALAIGGLHCSLAVFNK
# MINMVLKWPMELFDTTPLGRILSVFAYIAVVIVYCGGLRAAKLLHNQLLHQVIRGSICRFFDVTPLGRILNNFSADMDVIDEELPGTLDSCMTYIFMF
# YDTTPKGRILDRCSNDINCLDLVMPLNIRMCLSTAFQVNPSLFSLSRQSIASFLGDLGLQLGCLHAAQLLHALMLNRILRAPMWFSDTTPVGRIMSRF
# SKDIETVDQKIVEVLIDCIWCAFEVLATIVVISISTPIFLAVIVPIAFIYYFAQRFYVATSRQLMRLESVSRSPIYSHFGETVTGVSTIRAYTVEERF
# IEESDSKVDKNQVCKYPSLIANRWLAVRLEMVGNLIILFASLFAVLGGQTNPGLVGLSVSYSLQVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQE
# APWELESDKKHPKNWPEGGRVEFKDFQVRYREGLDLVLRGVTFNISGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGKIMIDGIDIATMGLHMLRSRL
# TIIPQDPVLFSGSLRSNLDPFEVKTDDEIWKALELAHLKTFAKSLTAGLNHEISEGGENLSVGQRQLVCLARALLRKTKVLILDEATAAVDLETDDLI
# QKTIRSEFKECTVLTIAHRLNTIMDSDKVIVLDKGQITEFASPTELLSDPKSAFYSMAKDANLV]
#
##gff-version	3
##query	GI16512%20[Drosophila%20mojavensis] 1 1442
scaffold_6500	Scipio	protein_match	415786	415850	1.0	+	0	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 1 22
scaffold_6500	Scipio	protein_match	416497	417798	1.0	+	1	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 23 456
scaffold_6500	Scipio	protein_match	417857	418118	1.0	+	1	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 457 543
scaffold_6500	Scipio	protein_match	418175	418442	1.0	+	0	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 544 632
scaffold_6500	Scipio	protein_match	418602	418788	1.0	+	2	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 633 695
scaffold_6500	Scipio	protein_match	419413	419451	1.0	+	1	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 696 708
scaffold_6500	Scipio	protein_match	419740	419802	1.0	+	1	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 696 716
scaffold_6500	Scipio	protein_match	421406	421584	1.0	+	1	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 717 775
scaffold_6500	Scipio	protein_match	421659	422557	1.0	+	2	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 776 1075
scaffold_6500	Scipio	protein_match	422614	423714	1.0	+	0	gene_id=kassiopeia_gene_id335988 GI16512 [Drosophila mojavensis];Query=GI16512%20[Drosophila%20mojavensis] 1076 1442
# protein sequence = [MSRLLVFCLCVFQLGLLINATGLYTIIAPGTIRSNFKYNVAVSVHKAEGKSTIKVGITGPSYNETKEVELLPMSTTNV
# EFDVPTLSSGDYNLTADGTEGVIFKNTTKLNYADNKPSIFIQTDKATYKPSDLVQYRVLFLDENTRPAAIDKPITIAISDGEQNRIKQLIDIQLTKGV
# YTGELQLSEQPVLGTWSIAVNVADDTAASKSFEVAKYVLPKFEVVVESAKDVAIQDGVVKATIRAKYTYGKPVKGKATVSLEEDFNYYRPINSESKRM
# KTVDIDGKAHVEFPIEKSAYGSGYTPPLKIFAEVTEDLTGNKQNASSTVTVHSQRYKIESVNAVTNYHPGKTFAYQFVVKNLDGSPVQGGSKKAKLVL
# EAPHRYFNFDRSDDSPDLKSIEWDAPLNEHGIATFDVVLPVNDTRFYNVKGVYDESSSYLGSIHKFQPTIESAEPLQIIVSTKTPKLGKDVSFDVKSN
# EQIPYFVYAIIARGNIVKAEHVDVPEGRKTHTIKFTPTFAMVPQASIYVFFIFDNELRFEERTVDFKKDFDNSIEISAPLEAKPSEDVELKIKTDADS
# YVGLLGVDQSVLLLKSGNDLARDAVFDSLDKYKTSTPWQSGYGRYPGQTSGLVTLTNANYPYNFATRSYDAVDGEVDYEIYLEAQEEDEAINDFVTKD
# VAVPKIEDRNKLIRKNFAEVWIWHSTNISEQNIQIRKEFPESWIFENMENDDAEGFTLVRKIPDTITSWVITGFSLNPRTGIALTKNPRKIRVFQPFF
# VSTNLPYSVKRGEVIAVPVIIFNYMDKSLDAEVTMDNSDKEFEFTEATNEVEENSIDEIKRVKRITVPSNNGQSISFMIRPNRVGSITLKITATTPLA
# GDTIHQKLKVEPEGVTQFENVAVFVNLMNQSELSQELNANIPTEAVPDSEFIEFSVVGDLLGPTIKNLDNLVRKPYGCGEQNMVNFVPNILVVKYLEV
# TNRNMPSVVAKAKKFLEIGYQRELTYKHDDGSYSAFGKSDKSGSTWLTAYVVRSFHQAANYTDVDPAIIMQGLNFLVSTQKENGEFPEVGKLFDNANQ
# NALGLTSFVLIAFFENKEFTDKSEYQQAIHKGLQFVAQEVDKTDDQYSLSIAAVALQLAKHPQAKKVLDKLQGLAKLEDGRKWWSKSAEKPTTETSGF
# RTWRPSSNDVEITSYVLMALLEEAPAEDSLPIIKWLIAQRNSNGGFSSTQDTVIGLQALTKFAFKAGSGTGTVDIDFVSSNGDNNGTINVNPENSLVL
# QSHILPKSTRKVNFTAKGQGSAMVQLSYRYNLAEKDKKPSFKVTPTVKDTPMQQLTLEVCAEYVPLEASDQKKDSNMAVMEIALPSGFIGDSDSFGKI
# QEVDRVKRIETKNSDSTVIIYFDSLTPGDVKCLPVEGVRAHLVAKQKPAAVSLYDYYDTDRRATEYYQVKSSLCDICEGSDCGAGCKKDK]
#
##gff-version	3
##query	GI16763%20[Drosophila%20mojavensis] 1 698
scaffold_6500	Scipio	protein_match	741093	741171	1.0	+	0	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 1 26
scaffold_6500	Scipio	protein_match	741231	741460	1.0	+	2	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 27 103
scaffold_6500	Scipio	protein_match	743500	743578	1.0	+	0	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 1 26
scaffold_6500	Scipio	protein_match	743638	743867	1.0	+	2	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 27 103
scaffold_6500	Scipio	protein_match	743932	744062	1.0	+	0	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 104 147
scaffold_6500	Scipio	protein_match	744217	744551	1.0	+	1	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 148 258
scaffold_6500	Scipio	protein_match	746075	746304	1.0	+	2	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 259 335
scaffold_6500	Scipio	protein_match	746390	746520	1.0	+	0	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 336 379
scaffold_6500	Scipio	protein_match	747117	747463	1.0	+	1	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 380 494
scaffold_6500	Scipio	protein_match	747527	747939	1.0	+	2	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 495 632
scaffold_6500	Scipio	protein_match	747995	748192	1.0	+	0	gene_id=kassiopeia_gene_id336227 GI16763 [Drosophila mojavensis];Query=GI16763%20[Drosophila%20mojavensis] 633 698
# protein sequence = [MLLKLLESPNCLLNRRNRYQFLSTLLINLICIAHGIGVGWLSPTLRKIQSVDSPLDFSLSISEISWVGSALGLGAVVG
# NILMGLVHSRLGSRLSLLFIAFPHSCLWILVYFAKSAEYLFIGRFLAGISSGSMYIVHPIFLSEISDAKIRGTFGSMVMLSVNVGVLMGYILSTHLAY
# HIIPFVVLVLPISYFISNLFFIRESPMHLIRKGRYFEAEESFRYYKNIREDNQMSEMHEFEAMKEALTQSDKNLDRVTIKDFINLICISHGMGIGWLS
# PTLRKLQSTDSPLQFSVDVNDVSWVGSALGLGSVTGNIICGLLINRIGGKLCLLLIAVPHSCLWFLVYFAQSVKFLIVGRFLAGITGGGIYIIHPIFL
# SEISDANIRGTLASMVMLSVNIGILLGYILGTHLAYYTVPFVVILCPLSYFALILLFIRDSPMQLIREQRFAAAEKSFRYYKNIKDSDSLDKQSLATL
# EFENIKMKLTNEDDMPDKVSLKDFLTPAAIKGYAMAGVIVIANQFSGLFTMVNYMSDIFAKSGSNMDPNTSSIIIGVVQILGAYVSTLLCDVCGRKIL
# MQVSSAGVAMSLTAFGLFTHFASIYDLSGWSWVPVALMSLDIFLGNIGLISCIFVLIVEMFPMKIRARATSVAIVVCSSLVFLMLNIFPLCMEHWGLP
# ATMWSCACITAVCFVCFSLFLKETKGKSMVED]
#
##gff-version	3
##query	GI16807%20[Drosophila%20mojavensis] 1 1367
scaffold_6500	Scipio	protein_match	935980	936067	1.0	+	0	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 1 29
scaffold_6500	Scipio	protein_match	936678	936750	1.0	+	0	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 1 24
scaffold_6500	Scipio	protein_match	937581	937916	1.0	+	2	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 30 141
scaffold_6500	Scipio	protein_match	937975	938055	1.0	+	2	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 142 168
scaffold_6500	Scipio	protein_match	938187	940556	1.0	+	2	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 169 958
scaffold_6500	Scipio	protein_match	941102	942327	1.0	+	2	gene_id=kassiopeia_gene_id336270 GI16807 [Drosophila mojavensis];Query=GI16807%20[Drosophila%20mojavensis] 959 1367
# protein sequence = [MTLRLVSILSLAFISVLPAQLDAFITQNTGCHHNGTWYADKSVVPSMEKCLNCQCNRKTLVCRLKVCPEMPMPPPRGC
# VVVQRKNSCCPYLSCARLDAFYKIPTKRRIIAYLDHYERESIDRVVNDNMLQRRSDDSDVDLLVCVKNGTVYKSGSAMSSSNLCSYCYCIGGNEKCVK
# PKCMLPVDGCKPIFVDSTCCPVRYDCSSKTSGKSSQEVRYRKNSNKHFQRMAQRLQRNRGCTVGAQFYAEGQKMRSDADKPCDICFCIRGTRRCAPKK
# CAPALKNCIPVVPKGQCCPSSYDCGSQRDYRRSQSSRQFNLYNLLFGKEEQEAEAAAAAALIPQNTMAEHYPLDRHPTEPPVGDPLQASSEKSIFDTL
# REGLEFIDGNNNQMLANNMDLVGSTPTASPLVSDPSSTTELSFLDLLLGPSTETEEPITPEATTEKKKPISWMDILLGPDEDESALTIEPTVAVESSS
# TLAPAPAPPTSSTTERSIERIADDFGDRWIEGQFAVGELPAEAQQDWARPADVPPASTTAQPPDLFNVLLDGLSVMLNDNATSTTSTTTTTTTTTSTT
# TTRRPFSTHAPPMFRPLPSSKPHHTRINSKLANLTVTPPMVVVTSKYGQPVTYRTMPSKGTTSTTSTTTTTSTATPKPLPVNVTNTKTTTTHRPSTTT
# TTTPRTTTTTKAKPKTTRRTTTTTTTTKPTTTTTTTTQPPTTTTTPKPTTPMPRTTFRPTFKQKPTPAYITSTTKPLIIKTNPTILEVDPLDDADSTA
# PTLPPSLPNLKIIPFLPTDAVDTKPPIPPPEGYSSHNYYQQPAGLLASQIASDRVDSEYDVTYVDQAQHGINFNNNNNHHNNNHNSDQAAYKYKFNVE
# VPAVAAPPEPVVHVIGSADYVKYDFNEQVVQPPVHSGFSPPTETEGGFMPKEPLVIDGEVLQEHVTSNVLLGDNYHVTQHIIDITTEREDNDTASIEI
# TTPDPFKDVIHTERPPNLDVLIGDKLQKKPAEQLQQQHIESVTYSISHSSGNKTAAAATTTSTTTAATTTTKQTSLIDKNEINKLDELLEELLGMNLP
# TKPPTSGSSNSSNSTVPPFKTLPTAAAPAAAAATDATTTTARPPATPTAARGHKKGNKTKPKTSSNRRNQTATATAKPSRNKGQATTRRTPASNSNNN
# SNNNNNGNGNINRNNSMGSTAQTSAKTKNTPATVTSTTTSTAATSSPTTAATTTTTTAAIVSTTVHPFLMSPFDKLPFMDTSYEVRHQQQQLQQQQQQ
# QLQQQQLQQQQQLPQFHHYQHAPSSSSTTTTTAATPAAAAAAGGGTATVAGGEGLMDPAGILKLARLQHLLPHVPSGSHYCGAIQSMPRCKCTEVGVS
# APIDCIQPRPQPFLR]
#
##gff-version	3
##query	GI16977%20[Drosophila%20mojavensis] 1 1783
scaffold_6500	Scipio	protein_match	1174268	1174287	1.0	+	0	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 1 7
scaffold_6500	Scipio	protein_match	1174470	1174518	1.0	+	1	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 8 23
scaffold_6500	Scipio	protein_match	1175035	1175083	1.0	+	1	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 8 23
scaffold_6500	Scipio	protein_match	1175145	1176098	1.0	+	0	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 24 341
scaffold_6500	Scipio	protein_match	1176157	1176653	1.0	+	0	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 342 507
scaffold_6500	Scipio	protein_match	1176714	1178164	1.0	+	1	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 508 990
scaffold_6500	Scipio	protein_match	1178230	1179204	1.0	+	2	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 991 1315
scaffold_6500	Scipio	protein_match	1179270	1180414	1.0	+	2	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 1316 1697
scaffold_6500	Scipio	protein_match	1180483	1180740	1.0	+	0	gene_id=kassiopeia_gene_id336421 GI16977 [Drosophila mojavensis];Query=GI16977%20[Drosophila%20mojavensis] 1698 1783
# protein sequence = [MLPHWKRLLFAAVIAGALVGTNAQFWTNPGATGSIHESLRHHTRDDPRDTFSIDESYDIVDSASIQRGAPLPKNCTAG
# YAGCVPKCIAEKGNRGLPGPEGQTGPKGLQGYAGPEGPPGDKGQKGDPGPFGARGQKGERGSRGIPGLPGVAGVQGPAGNPGAPGLNGKDGCDGTAGL
# PGLPGLSGMVGPRGYTGGPGPKGEKGEPAKENGDYAKGEKGEPGFAGRSGAPGPEGERGEKGQRGDTGPYGPPGPRGDRGIKGEKGAACFATAMPGEK
# GDKGEKGDPAPKLPVHGSDTVMGQRGDVGQKGEMGYMGEKGGLGPAGEPGLDGPKGEKGVPGFVGDRGRPGNFGPTGPAGQKGDRGETGLNGLPGLPG
# MKGEPGRPGKPGERGLVGPAGPPGGGRGQPGAPGPKGPRGYSGPPGPQGLNGMDGPQGPQGYMGPKGGPGLPGIPGNEGPAGQKGEKGIPGFVGSPGP
# VGPIGQNGPPGLDGQKGEPGLPGYGIQGPKGDDGINGFPGQKGAKGERGYKGNAGVPGDSKLGRPGTPGPAGIPGPQGDAGRPGIPGDKGDMGPKGDA
# GGKCSLCPPGAKGDKGERGVNGIPGNPGPRGPPGERGYAGERGDDGIVGQTGPPGEKGLDGLPGAPGATGKPGNSAFVNLSQIIPEKGPKGDPGYPGA
# PGIKGERGDSGIPGLPGAKGEMGVKGDKGYMGQPGTDGAPGARGRDGFDGFPGQSIKGEPGRSGVDGPKGDKGSLGYVGQKGEPGTCAASELKVPMKG
# NKGDRGPTGMPGPIGPMGQKGEIGRNGEKGDTGPQGPPGLVGPRGITGPRGEKGNPGQYGAPGNDGKDGLRGPPGRYGERGQKGEQGATVAGPPGPAG
# RDGLTGEKGDRGPVGAIGMIGPMGNPGYPGDKGDSGFPGQPGATGALGQKGEPGPIGPEGRPGPPGIPGIAGVQGRDGAKGEPGSIGLVGMPGSKGER
# GAPGNDGPKGLTGLAGAPGKRGPIGPAGIPGMKGDKGARGLTGNDGLPGARGPTGPPGMMGVKGDMGPRGLPGQDGLNGLPGEKGNQGLPGFDGPQGE
# PGDASEKGQKGEPGVSGLRGQDGLPGAPGLPGEKGLPGIAVHGRPGPQGEKGDTGRDGLYGQDGLPGDKGDRGFNGPPGAKGDKGNSGLPGNPGIPGR
# DGLPGPQGSPGPIGYPGAKGAKGERGPGGVDGLKGAMGLPGRPGYQGAPGLKGDKGEKGLRGPAAEVDLFALRGEKGTPGSPGLTGLPGLQGIKGNQG
# PAGYPGEKGERGLTGPAGVPGLAGEPGPKGDMGLPGERGFPGPVVRGEKGLPGRAGKNGRPGAPGLPGMKGERGLAGLPGNAGLVGLPGPIGPMGPKG
# ERGLTGPPGIDGIAGMDGATGEKGDVGYPGMKGDRGLPGLEGQKGDKGNSGPPGPPGLNGLTGLKGDTGAPGLPGHPGPAGAPGEKGFTGPKGRDGRD
# GLPGLRGEKGEPGMIPPPGPKGEPGRPGRDGEKGDRGPQGERGLIGIQGERGEKGERGSIGLTGPVGRPGLKGDRGEQGLIGLEGEVGPMGFKGEPGL
# PCSGAQDYLTGILLTRHSQNDQVPQCAPGHVELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVMSCGQNNVCNYASRNDKSFWLSTSAPIPMM
# PVNSQEISKYISRCVVCEAPANVIAVHSQSLAIPNCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGHCHFYETMTSF
# WMVTLEDNDQFNKPEQQTLKAGNLLSRVSRCQVCVKNSS]
#
##gff-version	3
##query	GI16986%20[Drosophila%20mojavensis] 1 633
scaffold_6500	Scipio	protein_match	1239130	1239309	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 1 60
scaffold_6500	Scipio	protein_match	1239380	1239735	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 61 179
scaffold_6500	Scipio	protein_match	1239861	1240027	1.0	+	1	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 180 234
scaffold_6500	Scipio	protein_match	1240644	1240962	1.0	+	2	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 235 341
scaffold_6500	Scipio	protein_match	1241273	1241450	1.0	+	1	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 342 400
scaffold_6500	Scipio	protein_match	1241765	1241945	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 401 460
scaffold_6500	Scipio	protein_match	1244020	1244200	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 401 460
scaffold_6500	Scipio	protein_match	1245625	1245764	1.0	+	2	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 461 507
scaffold_6500	Scipio	protein_match	1245919	1246152	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 508 585
scaffold_6500	Scipio	protein_match	1246209	1246352	1.0	+	0	gene_id=kassiopeia_gene_id336429 GI16986 [Drosophila mojavensis];Query=GI16986%20[Drosophila%20mojavensis] 586 633
# protein sequence = [MTLQTFTRKMRGRMRSNTCRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCRRAGEYDVELPNAERLADDNQLVNDNE
# INTEKSLDGEDNGGGPAPIMGQGFVSGGISMTYRSVVLKKWFQAPTVRESRGKPGEMGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVR
# HENCRHKHYPSKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRSLLKEIILVDDASERDFLGKQLEDYVAKLPVRTFVLRTEKRSGLIRARLLGAEHV
# TGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDDTFEYITASDSTWGGFNWKLNFRWYRVPQREMARRNNDRTAPLRTPTMAGGLFSI
# DKEYFYEIGSYDEGMDIWGGENLEMSFRIWQCGGILEIIPCSHVGHVFRDKSPYTFPGGVAKIVLHNAARVAEVWLDEWRDFYYAMSTGARKASAGDV
# SDRKALRERLQCKSFRWYLENVYPESLMPLDYYYLGEIRNAETETCLDTMGRKYNEKVGSSYCHGLGGNQVFAYTKRQQIMSDDLCLDAASSNGPVNM
# VRCHNMGGNQEWVYDAEEKWIRHTNTGQCLQRATRDDASTPLLRPCNYSKGQQWLMESKFKWQAH]
#
##gff-version	3
##query	GI17055%20[Drosophila%20mojavensis] 1 2153
scaffold_6500	Scipio	protein_match	2795806	2796009	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1 68
scaffold_6500	Scipio	protein_match	2796227	2796370	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 69 116
scaffold_6500	Scipio	protein_match	2796553	2796696	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 117 164
scaffold_6500	Scipio	protein_match	2797548	2797928	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 165 291
scaffold_6500	Scipio	protein_match	2797992	2798055	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 292 312
scaffold_6500	Scipio	protein_match	2798123	2798221	1.0	+	2	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 313 345
scaffold_6500	Scipio	protein_match	2798494	2798597	1.0	+	2	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 346 380
scaffold_6500	Scipio	protein_match	2799142	2799245	1.0	+	2	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 346 380
scaffold_6500	Scipio	protein_match	2799749	2799852	1.0	+	2	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 346 380
scaffold_6500	Scipio	protein_match	2800674	2800777	1.0	+	2	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 346 380
scaffold_6500	Scipio	protein_match	2801929	2802336	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 381 516
scaffold_6500	Scipio	protein_match	2802785	2802955	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 517 573
scaffold_6500	Scipio	protein_match	2803366	2803536	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 574 630
scaffold_6500	Scipio	protein_match	2803960	2804130	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 631 687
scaffold_6500	Scipio	protein_match	2804563	2805152	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 688 884
scaffold_6500	Scipio	protein_match	2805374	2805491	1.0	+	1	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 885 923
scaffold_6500	Scipio	protein_match	2805742	2805859	1.0	+	1	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 885 923
scaffold_6500	Scipio	protein_match	2806186	2806303	1.0	+	1	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 885 923
scaffold_6500	Scipio	protein_match	2807024	2807110	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 924 952
scaffold_6500	Scipio	protein_match	2807708	2807794	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 924 952
scaffold_6500	Scipio	protein_match	2808589	2808852	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 953 1040
scaffold_6500	Scipio	protein_match	2810411	2810620	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1041 1110
scaffold_6500	Scipio	protein_match	2810948	2811834	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1111 1406
scaffold_6500	Scipio	protein_match	2812022	2812100	1.0	+	1	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1407 1432
scaffold_6500	Scipio	protein_match	2812460	2812538	1.0	+	1	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1407 1432
scaffold_6500	Scipio	protein_match	2812872	2814047	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1433 1824
scaffold_6500	Scipio	protein_match	2814120	2815025	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 1825 2126
scaffold_6500	Scipio	protein_match	2816905	2816985	1.0	+	0	gene_id=kassiopeia_gene_id336496 GI17055 [Drosophila mojavensis];Query=GI17055%20[Drosophila%20mojavensis] 2127 2153
# protein sequence = [MPKPLASQEDEDPTPYLFVSLEQRRIDQSKPYDSKKSCWVPDEKEGYLLGEIKATKGDIVSVGLPGGEVKDFKSEKVE
# KVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYHKLIYTKDFKKDQLQQVNPPKYEKAEDMSNLTYLNDASVLHNLRQRYYHKLIYTYSGLFCVAINP
# YKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASTKKDESQKNKGSLEDQVVQTNPVL
# EAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGAVPGVKDICLLTDNIYDYHIVSQGKVTVPSIDD
# SEEFILTDQAFDILGFTKQEKEDVYKITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNS
# IGALCKGVFDRLFKWLVKKCNETLDTKQKRQHFIGVLDIAGFEIFDYNGFEQLCINFTNEKLQQFFNHVMFVLEQEEYTKEGIHWDFIDFGMDLLACI
# ELIEKYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIDWAFIDFGMDLLACIDLIEKYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYQREG
# IEWTFIDFGMDLQLCIDLIEKPMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIGHYAGVVAYNITGWLEKNKDPLN
# DTVVDQFKKSQNKLLIEIFADHPGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGMVDAHLVMHQLTCNGVL
# EGIRICRKGFPNRMVYPDFKMRYQILNPRGIKDLTDPKKASKVLIESTELNEDLYRLGHTKGIEDPKKCTKILIESTELNDDQYRLGNTKVFFRAGVL
# GQMEEFRDERLGKIMSWMQAWARGYLARKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKIKPLLNVSRIEDEIARLEEKAKKAEELHAAEVK
# VRKELEALNAKLLAEKTALLDSLSGEKGQLQDFQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELSVQKAEQ
# DKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGESNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQE
# AVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVGKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIE
# LNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEHDRQTCHNELNQTRTACDQLARDKAAQEKIAKQLQHTLNEVQ
# SKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQ
# RQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEW
# KLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQE
# ENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKD
# IQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKN
# SEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIK
# ELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGSVGRGASPAPRATSVRPQF
# DGLAFPPRFDLAPENEF]
#
##gff-version	3
##query	GI17087%20[Drosophila%20mojavensis] 1 1413
scaffold_6500	Scipio	protein_match	3473015	3473108	1.0	+	0	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 1 31
scaffold_6500	Scipio	protein_match	3508649	3508742	1.0	+	0	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 1 31
scaffold_6500	Scipio	protein_match	3511465	3511655	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 32 95
scaffold_6500	Scipio	protein_match	3513299	3513401	1.0	+	0	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 96 129
scaffold_6500	Scipio	protein_match	3515966	3516259	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 130 227
scaffold_6500	Scipio	protein_match	3516358	3516498	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 228 274
scaffold_6500	Scipio	protein_match	3518485	3518616	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 275 318
scaffold_6500	Scipio	protein_match	3518729	3519666	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 319 631
scaffold_6500	Scipio	protein_match	3519737	3519856	1.0	+	0	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 632 671
scaffold_6500	Scipio	protein_match	3519925	3520330	1.0	+	0	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 672 806
scaffold_6500	Scipio	protein_match	3524488	3524583	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 807 838
scaffold_6500	Scipio	protein_match	3524666	3524912	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 839 921
scaffold_6500	Scipio	protein_match	3525194	3525357	1.0	+	1	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 922 975
scaffold_6500	Scipio	protein_match	3528375	3528639	1.0	+	2	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 976 1064
scaffold_6500	Scipio	protein_match	3534237	3535284	1.0	+	1	gene_id=kassiopeia_gene_id336528 GI17087 [Drosophila mojavensis];Query=GI17087%20[Drosophila%20mojavensis] 1065 1413
# protein sequence = [MRQFVALLQLLQPLLLVLAGLNGLTLVAALKGENPHIIEHPMDTTVPKNDPFTFNCKAEGNPPPTIHWFKDGRELKTD
# AGSHRIMLPAGGLFFLKVIHSRRESDAGTYWCQAKNELGVARSRNATLQVAFLRDEFRLEPQNTRVAQGEVALMECGAPRGSPEPQISWRKNGQTLNL
# NGNGANKRIRIVDGGNLAIQDARQSDDGRYQCVVKNIVGTRESSTAFLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPL
# RRVHILEDRSLKLDDVTLEDMGEYSCEADNAVGSITATGILTVHAPPKFITRPKNQLVEIGDEVLFECQASGHPRPTLYWSVEGNSSLLLPGYRDGRL
# EVSLTPEGRSVLSIARFAREDSGKVVVCNALNAVGSVSSRTVVTVDTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPAPQISWYLDGIPIDVQE
# HERRNLSESGTLTISDLQRHEDEGLYTCVATNRNGKSSWSGYLRLDTPTNPNIKFYRAPELSTYPGPPGKPQLVEKTDDSVTLSWTRSNKVGASSLVG
# YVVEMFGKNETDGWVAVGTRIQNTTYTQLGLVAGVNYFFLIRAENSHGLSLPSPMSEPIAVGTRYFNSGLDLSEARASLLSGDVVELTNASVVDSTSM
# KLTWQIINGKYVEGFYIYARQLPNPITNMLTANTNPLLASTSASVSASASALISTKPNIAAAGKRDAMDGPESQTPSQIQIQSAYSTKYRMLTILNGG
# GASSCTMTGLVQYTLYEFFMVPFYKSVEGKPSNSRLARTLEDVPNEAPFGMEAILLNASAVFLKWKAPQLKEEHGVLLYYHVIVRGIDTAHNFSRILT
# NVTIDAASPTLVLANLTEGVMYTVGVAAGNNAGIGPYCVPATLRLDPITKRLDPFINQRYPINQDHVNDVLTQPWFIILLGAILAIMMLSFGAMVFVK
# RKHMMMKQSALNTMRGNHTSDVLKMPSLSTRNGNGYWLDASTGGMVWRTSPSGDTLDMQKDHIADYAPVCGASGAGSGGATTSSGNTGGIDDIHGHAG
# ERNHQRYVGEYSNIPTDYAEVSSFGKAPSEYGRHGNASPAPYATSVILNPGQQQQQQQQQPRYQQRPGPSSYGMQRPMHPHYQQQQQQQQQQQLQLQP
# HSSANIYQQMSTTGEIYPSNTAGARSVYSDQYYYPKDKHMHMHITENKLSNCHTYEAAPNTHQQQQQQQQQLTASVRRQQLPHGCSIGRDSARFKVPD
# QTLGKSHQQNLLDLDGSSFCYNGLADSGCGGSPSPMAMLMSHEDDQALYHTADGDLDDMERLYVKVDDQQQPSQQQQQLLPLVPQQQQPQQQHLPQQL
# PLDSQSWRAQSTRSSRKAHVEEPLAKEAAELIYAPGSVASERSLLSNSGSGSSSQQPCHNV]
#
##gff-version	3
##query	GI17338%20[Drosophila%20mojavensis] 1 277
scaffold_6500	Scipio	protein_match	8688828	8689311	1.0	+	0	gene_id=kassiopeia_gene_id336769 GI17338 [Drosophila mojavensis];Query=GI17338%20[Drosophila%20mojavensis] 1 161
scaffold_6500	Scipio	protein_match	8689317	8689437	1.0	+	2	gene_id=kassiopeia_gene_id336769 GI17338 [Drosophila mojavensis];Query=GI17338%20[Drosophila%20mojavensis] 162 202
scaffold_6500	Scipio	protein_match	8689446	8689569	1.0	+	2	gene_id=kassiopeia_gene_id336769 GI17338 [Drosophila mojavensis];Query=GI17338%20[Drosophila%20mojavensis] 162 203
scaffold_6500	Scipio	protein_match	8689601	8689766	1.0	+	1	gene_id=kassiopeia_gene_id336769 GI17338 [Drosophila mojavensis];Query=GI17338%20[Drosophila%20mojavensis] 204 258
scaffold_6500	Scipio	protein_match	8689827	8689883	1.0	+	0	gene_id=kassiopeia_gene_id336769 GI17338 [Drosophila mojavensis];Query=GI17338%20[Drosophila%20mojavensis] 259 277
# protein sequence = [MGDSAILLAQKSFLRGPVTNNGFVNFMRDYAAQARGLDVPDAITGGKMWNRLTPSQRRNYRFMQVDGEDDNDVSSKES
# ENGSDKASENEDEDMDAMDDADDADSDDADDADDADDADDASDADDADDADDADDTDDQDDGCCPKKRKKNPCCPSPCPKKRRPVLSQTKETPPETLL
# PKAVLPEAQKALLSEAEALLSEAEALLIKCQKPGPITNNGYLNFLRAYRRKHCGLKPKELVMKAARAWCRLPECKKDFYRRQACKVTKSCRHKRRKVC
# TGK]
#
##gff-version	3
##query	GI17376%20[Drosophila%20mojavensis] 1 143
scaffold_6500	Scipio	protein_match	9557217	9557253	1.0	+	0	gene_id=kassiopeia_gene_id336806 GI17376 [Drosophila mojavensis];Query=GI17376%20[Drosophila%20mojavensis] 1 12
scaffold_6500	Scipio	protein_match	9558958	9559140	1.0	+	2	gene_id=kassiopeia_gene_id336806 GI17376 [Drosophila mojavensis];Query=GI17376%20[Drosophila%20mojavensis] 13 73
scaffold_6500	Scipio	protein_match	9569211	9569396	1.0	+	2	gene_id=kassiopeia_gene_id336806 GI17376 [Drosophila mojavensis];Query=GI17376%20[Drosophila%20mojavensis] 13 74
scaffold_6500	Scipio	protein_match	9569455	9569660	1.0	+	2	gene_id=kassiopeia_gene_id336806 GI17376 [Drosophila mojavensis];Query=GI17376%20[Drosophila%20mojavensis] 75 143
# protein sequence = [MDACLSPGYKISDVSGQDNKCFNCTELVNCKASQYFLKYVDSADKNKVVLKTPADKADPILEKCLDEGFRINGIDTLK
# GTLCSGSTDGLCHAIGQATGSQSVLFSHCGNCYKECDCYNQNGIDRTEGAIILTMSLAAFYTLIQ]
#
##gff-version	3
##query	GI17458%20[Drosophila%20mojavensis] 1 146
scaffold_6500	Scipio	protein_match	11777589	11777628	1.0	+	0	gene_id=kassiopeia_gene_id336886 GI17458 [Drosophila mojavensis];Query=GI17458%20[Drosophila%20mojavensis] 1 13
scaffold_6500	Scipio	protein_match	11777695	11777880	1.0	+	2	gene_id=kassiopeia_gene_id336886 GI17458 [Drosophila mojavensis];Query=GI17458%20[Drosophila%20mojavensis] 14 75
scaffold_6500	Scipio	protein_match	11779212	11779394	1.0	+	2	gene_id=kassiopeia_gene_id336886 GI17458 [Drosophila mojavensis];Query=GI17458%20[Drosophila%20mojavensis] 14 74
scaffold_6500	Scipio	protein_match	11779451	11779665	1.0	+	2	gene_id=kassiopeia_gene_id336886 GI17458 [Drosophila mojavensis];Query=GI17458%20[Drosophila%20mojavensis] 75 146
# protein sequence = [MEDVVDYSSHCSHLNCLVCRNCVSPASCRYTKVVQCTNYAANVTSQYLATYHQNVLELNSSRFNCLALKYVYTKNTSV
# DYHLFACVHPDLDVCALQLKPEVSDWNRTRCIVCSGNNCNRNSSGKIGGALYMIVGTVCTLILCKTYG]
#
##gff-version	3
##query	GI17781%20[Drosophila%20mojavensis] 1 665
scaffold_6500	Scipio	protein_match	18346395	18347066	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 1 224
scaffold_6500	Scipio	protein_match	18349001	18349639	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 225 437
scaffold_6500	Scipio	protein_match	18352239	18352925	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 225 453
scaffold_6500	Scipio	protein_match	18354370	18355011	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 225 438
scaffold_6500	Scipio	protein_match	18356003	18356560	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 438 623
scaffold_6500	Scipio	protein_match	18356896	18357021	1.0	+	0	gene_id=kassiopeia_gene_id337200 GI17781 [Drosophila mojavensis];Query=GI17781%20[Drosophila%20mojavensis] 624 665
# protein sequence = [MLRHDSAPPRCWQLALRRIFKAQDFYGSIRPMIGMALVLGITPYSICRDGCQGEQVVRESWYGFANAISRWLLIAYCY
# LYTLQQKESLIGYFMHNHISQLSARMHDVAGIVAGIVILILPLFLRRHLRNALEKLVRVDRHLDHLSFPIDYRQVQYQILLVLLLVSTLDSTIIIVCL
# VCLSIMEVKPTFQLIFSMMYELIIISITICMFCLLAGSIQRRFKKLHKTALRRVRKYFISSQVYEALRPLLFLTFLYGLTPFHVVRRKMGESYIKMSC
# FGIFNIFVYIVLCGFCYITSLRQGESIVGYFFRTEISTIGDRLQIFNGLITGVVIYTSAILKRCKLLGTLTILHSLDTNFSNIGIRVKYSRIFRYSIM
# LLVCKLLILGVYFVGVFRLLVSLGVTPSFCVCMTFFLQHSVVSIAICLFCVIAFSFERRLSIVNQVLKNLAHQWDTRSIKAVQKQRSLQCLDSFSMYT
# IVTKDPAEIIQESMEIHQLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIVSIVEGSNRAI
# KKSEKTGAIVHSLLNKTKSPEVREKLHQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQFTSNSPSNESSTGFDCCEAYHNMTNHTV]
#
##gff-version	3
##query	GI17806%20[Drosophila%20mojavensis] 1 265
scaffold_6500	Scipio	protein_match	18748682	18748794	1.0	+	0	gene_id=kassiopeia_gene_id337224 GI17806 [Drosophila mojavensis];Query=GI17806%20[Drosophila%20mojavensis] 1 38
scaffold_6500	Scipio	protein_match	18748854	18749267	1.0	+	1	gene_id=kassiopeia_gene_id337224 GI17806 [Drosophila mojavensis];Query=GI17806%20[Drosophila%20mojavensis] 39 176
scaffold_6500	Scipio	protein_match	18749320	18749578	1.0	+	1	gene_id=kassiopeia_gene_id337224 GI17806 [Drosophila mojavensis];Query=GI17806%20[Drosophila%20mojavensis] 177 262
scaffold_6500	Scipio	protein_match	18750042	18750452	1.0	+	1	gene_id=kassiopeia_gene_id337224 GI17806 [Drosophila mojavensis];Query=GI17806%20[Drosophila%20mojavensis] 39 175
scaffold_6500	Scipio	protein_match	18750505	18750772	1.0	+	1	gene_id=kassiopeia_gene_id337224 GI17806 [Drosophila mojavensis];Query=GI17806%20[Drosophila%20mojavensis] 177 265
# protein sequence = [MVFILDPSGIICLIGTYGAVIYADYVVIQWIIITAMPLIWAPFHVVLFHAIVLLVFLSHSKAVFTDPGIVPLTTNRPD
# FSDLPSGEGHGSEWTVCSHCKAHRPPRAHHCSTCQRCIRRMDHHCPWINNCVGEGNQKYFLQFLFYVAVLSFYSVALVLGSWVSPCTECNQIVKQTQW
# MHTIVLMMESTLFGLFVTLIMLDQLNVILYDESVFETREQKGAYWSKSRRYQMLAKVFGPGHPMLWLLPRASLNDATRNHGAALLSHEV]
#
##gff-version	3
##query	GI17886%20[Drosophila%20mojavensis] 1 7357
scaffold_6500	Scipio	protein_match	20413961	20414014	1.0	+	0	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 1 18
scaffold_6500	Scipio	protein_match	20418068	20418293	1.0	+	0	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 19 93
scaffold_6500	Scipio	protein_match	20418375	20418476	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 94 127
scaffold_6500	Scipio	protein_match	20418573	20418689	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 128 166
scaffold_6500	Scipio	protein_match	20425487	20425990	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 167 334
scaffold_6500	Scipio	protein_match	20426227	20426580	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 335 452
scaffold_6500	Scipio	protein_match	20427319	20434602	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 453 2880
scaffold_6500	Scipio	protein_match	20435050	20435358	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 2881 2983
scaffold_6500	Scipio	protein_match	20436215	20438023	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 2984 3586
scaffold_6500	Scipio	protein_match	20438093	20438185	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 3587 3617
scaffold_6500	Scipio	protein_match	20442123	20442920	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 3618 3883
scaffold_6500	Scipio	protein_match	20453941	20454084	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 3884 3931
scaffold_6500	Scipio	protein_match	20454293	20454370	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 3932 3957
scaffold_6500	Scipio	protein_match	20456006	20456188	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 3958 4018
scaffold_6500	Scipio	protein_match	20456456	20456941	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 4019 4180
scaffold_6500	Scipio	protein_match	20457009	20459444	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 4181 4992
scaffold_6500	Scipio	protein_match	20459507	20460127	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 4993 5199
scaffold_6500	Scipio	protein_match	20460196	20460513	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5200 5305
scaffold_6500	Scipio	protein_match	20461036	20461359	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5306 5413
scaffold_6500	Scipio	protein_match	20461420	20461737	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5414 5519
scaffold_6500	Scipio	protein_match	20461807	20462139	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5520 5630
scaffold_6500	Scipio	protein_match	20462220	20462546	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5631 5739
scaffold_6500	Scipio	protein_match	20462611	20462928	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5740 5845
scaffold_6500	Scipio	protein_match	20463128	20463448	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5846 5952
scaffold_6500	Scipio	protein_match	20463511	20463834	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5953 6060
scaffold_6500	Scipio	protein_match	20464007	20464345	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5953 6065
scaffold_6500	Scipio	protein_match	20477681	20477989	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5953 6055
scaffold_6500	Scipio	protein_match	20479833	20480132	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 5953 6052
scaffold_6500	Scipio	protein_match	20510431	20513655	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 6061 7135
scaffold_6500	Scipio	protein_match	20513731	20514156	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 7136 7277
scaffold_6500	Scipio	protein_match	20514239	20514477	1.0	+	2	gene_id=kassiopeia_gene_id337303 GI17886 [Drosophila mojavensis];Query=GI17886%20[Drosophila%20mojavensis] 7278 7357
# protein sequence = [MNIFLPLVTWIVLLLSSTVHSQHQQIQPFKTNPNKHSRFRGEVFFLNLEDGYFGCQVNESTDYLQLYDLSKICDGNQD
# CFLGSDELSKELKCTNDCDKDGTQCTNGVCLNGVCHCNDGFGGCNCVDPDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGDGFHCEDIDECQDPAI
# ASRCVENAECCNLPAHFLCKCKDGYTGDGEVLCTDIDECSNPLACGAHAQCINTPGNHTCVCPEGYVGNPYDGCQDLDECTYPNVCGPGAICTNLEGS
# YRCDCPPGYDGDGRAAQGCVDLDECARTPCGRNADCLNTDGSFRCLCPDGFSGDPMHGCEDVDECAINNPCGLGAQCVNLGGSFQCRCPLGFVLEHDM
# HAEAPLPATPTLQLGYADGDTLAEPAATSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDNPCGENAVCTD
# TIGSFVCTCKPDYTGDPFRGCVDIDECAALDKPCGQHAICENAVPGYNCKCPQGYDGKPDPKVACEQVDVNILCRTNFDCTNNAECIENQCFCLDGFE
# PIGSSCVDIDECRTHAEACGPHAQCLNTPGSYRCDCEAGYVGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCEEGWTYNPSDVAAGCVDIDECDL
# LHGPFGSCGQNATCTNSPGGYSCACPPGFSGDPHTKCQDVDECRAGNKCGIGAECVNMAGGGYTCRCPDGTLPDPDPAVHCAPIVSCSSNEQCPGNAI
# CDETKRCLCPEPNIGNDCRHPCEARDCGAHAQCMLANGQAQCLCAPGYTGNAALPGGCSDIDECRANPCAANAICTNTAGGYLCQCPGGSTGDAYTEG
# CATPKIAGCSDANPCAPGESCVQDAFTGSSVCICRQGYERNPEGGQCQDVDECAAQRAKPACGLNALCKNLPGSYECRCPQGHTGNPFVMCEICSSPE
# CQCQAPYKLLGNSCVLAGCSTGQPCPSGAECISIAGGVSYCACPKGYQTQPDGSCVDVNECEERGAQLCAYGALCVNQNGGYSCHCPEGYQGDAYNGL
# CAPAQRKCAADKECASNEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAKCTPSDPPQCMCEVGFKGDPLLGCTDEDECAHLPCAYGAYCVN
# KKGGYQCVCPKGFTGDPYKSGCILEDSTVPRSSCLSNEDCASNLACLDGICASPCASLLCGSNAYCETEQHAGWCRCRVGFVKNADGDCVSQCQDVIC
# GEGALCIPTSEGPTCKCPQGYLGNPFPGGSCSTDQCTASRPCDERQICINGRCKERCDGVVCGIGATCDKTNGKCVCEPNFVGNPDLLCMPPIEEAKC
# SPLCGENAHCEYGIGQSRCACNPGTYGNPYEGCGAQKKNVCQPNSCGPNAECRAAGNQISCICPQGFSGNPYVGCQDIDECANKPCGLNAACLNTAGG
# FECLCLSGHAGNPYSSCQPIESQFCQDAGQCQCSERVECPDGYSCEKGHCKNLCSNTACGPRAICDAGKCLCPLGYVGDAYDLSQGCSIRGQCGNDAD
# CRHTEICFQLGKGLRKCVDACTKIQCGPNALCVADDHRSLCICADGYFGNPSNLQVGCQPERKVPDTESKCTTDKDCERGFGCQADALGTRECIHLCS
# NVVCGPNEVCKINPAGHAVCNCAESYVWNPVVSSCEKPSLPDCTSDENCPDASACRPDVLGVLKCVAICDAFTCPANSVCVARHHQGRCDCLTGFVGN
# PNDRNGCQLERKHQCRSNAECPESEACIKDESTQSLSCRPACDSVKCGPRAVCITNNHQAQCQCPPGPYAGDPYDPFNGCKSVPCVYNHDCPSNQMCN
# RMTHTCYDVCDEESCGENAICLAEDHRAVCQCPPGYRGNPLPEVACVKQSGCAPGTCHPTAICEITPDGATCKCPPLFVGEAEPNTRGCRPDGQCPNG
# DADCPANTICAGGRCLNPCDNACGSNADCKVVNRKPVCSCPLRFQPIGDSAKNGCARSASKCQTDVDCGGELCYNGQCRVACRNGQDCSEGERCVGNV
# CVVACLDHSQCSKGLACIEGHCAIGCRSNKECKQEQSCISNKCADPCQSTTSCGPNALCSIAQHRSQCSCPDGFEGNPTPEQGCVRVPAPCLASNQCP
# SGHMCIGNQCNLPCTKTSACAVGERCYQQVCRKVCYSSNNCLAGEICNSDRTCQPGCESDADCPATELCLNGKCKCANGFIGTPFGCSDINECTEQPC
# HASAKCENVPGSYRCICPEGTVGDGYTQQGCAKPRECNRHEDCANSLSCIHGKCTDPCLHTVCGANALCQAEGHEATCSCPAGYLGDPNDPGVGCFKV
# ECIDHVDCASDRACDPETNRCIKPCDLTSCGKGSCQVSDHRAICECYEGYQLTNGVCVDLNECLQQPCHSTAFCDNLPGSYQCKCPEGLIGDPLQAGC
# RDPSECLSDADCPPTASCQNSRCRSPCERENACGRNADCLAQSHKAICNCPANSRGDPQVECVHIECEDNGDCGADKACLDAKCIDPCSLPNACGALA
# RCSVQNHIGLCACESGSTGDAKQGCVQLQYCQQDAQCPQGSICAHGICSPLCSSNRDCIAEQLCLQGVCQSTCKSNSTCPQFQFCQNNICAKELECST
# NGDCGEDETCLVDAYGRARCEPVCLGRAACGRNAECIARSHAPDCVCKEGFIGDARSGCRKIECTTDDDCSNDKSCDNNMCKIACLIGQPCGENALCT
# TENHRQVCHCQPGFSGDPRVRCDVIDFCKDAPCGPGARCRNSRGSYKCTCPLGLIGDPYNEGCRSSVECDSHDDCPPHAACVKTNGVPKCQDVCAQLQ
# CGPNAECVPKGHVAHCACRNGYDGQPADRVAGCKPLPMPCQITSDCPTNTYCSDSVCKPACLLDTECTSSEVCQGGQCFDPCLQPLACGQNAQCQMLS
# HVKQCHCPEGFTGDATKECVRVPVACDGDCAPGYTCRDSMCLPVCHSDLECASNEKCLRGNCMLTCRVDNDCFLGHVCLHNKCVFGCHVDDDCSASES
# CRNDKCVNPCLESPCGPNAACSVSNHRASCSCLDNMVPNPTAQVGCVRSPPLECHENRDCSNGLACFESVCRPLCADDAGCLTNERCQQGVCKPLCRH
# DNECANGEVCLGLNCVTGCRSDQGCPSHLACIGQQCVDPCSEPTACGTNALCQAVDHRKQCSCPAGLSGNADVACKTPRIACARNEDCGSNQLCYAGS
# CQGKCRNDQNCLSDERCMRGTCRTVCNTDSACAQGQICENRVCQTGCRNDLSCANDEACINKKCQNPCQTPGQCGQCADCLVINHGVQCQCPASYMGD
# GLTGCQLPPVRCHPGCECDESGAYCAAKCSRSEDCECGQQCARGKCRNKCGPKRQCPLGQLCERGACIAGCKSNGDCAVDQSCQNGKCVDPCADDRAC
# GRNALCTVSEHRMLCYCPDGYEGEPSKECVQFECREDSDCETSKRCDQGKCRNPCLEYGACGTNAQCRVINRKAQCSCPPDFFGNPATACQPLDGGCS
# NNPCGANSKCIELPGGYECACMDGCMGDAHKGCLCEGNLVNGCHEQPCGLNAACRVLSNNQAECYCPEDFPNGDAYVQCYLTPPQEDCRTRGCESGSC
# VRSGYDYVCQQDTEQCYSDTDCPSEKSCLQGHCTDPCTMRGACGTNALCQTVLHRPRCSCPSCHIGRPEVECKPDPKCVSEDTDPKTKEQIPCTNDAE
# CPETLQCGQYGQCTDPCNNPLFICESNKKCETRRHQPVCICKSGFIVNEYGELTCAPDKRECYRDDDCASNMACTDGKCRNPCIVPLGRAPICAENKS
# CEVQDHKPVCICMRDCQPSISICLRDAGCPAGLACRNYQCVDPCKFATCASNSPCIVEDHKPICKFCPTGFIADAKYGCQKEIGCASSDECPTQQACV
# NALCVDPCAYENPCGRSEDCRVIAHQPVCASATGRTPGCEHCPPGAKCDPTTGACIKVECTHNSDCGITEACINERCQHPCDVHNPCAQNAVCINANH
# AADCSCQDGYQGNGLVGCQPARTHVCQYNEDCPSNKLCDRLNRRCINPCQEDSCGENAECVPVNHGINCRCLPGYLGNAYVLCQQSLGCRSDSECDAS
# QACINGKCTSPCQCGAFALCDVIDHRGVCKCPPGYNGNPEVGCSPPQNPCDPNPCGLNAQCELDNGNPICFCPKGLTGNPFKNCIPEGDECTPNPCGP
# NSGCRRVNGAPVCFCLPEYEGQPPQIPCELPTNPCEPSPCGPNTQCAVLSNGFSKCTCLPGYVESPNTIRGCVEPINPCEPNPCGTGAICDSSRQPVC
# YCPDNKIGNPFRICEKPAVSIELCQPGPCGRNADCYVAGNREECYCRSGYAGDPYQGCIETSRTVCDPNPCGPNANCVVAGDGQTACVCPEGLSGDPT
# SLLGCHGYECQVDADCPQSKACMGFRCYDPCPGACGYGANCRVEQHHPVCSCNAGLTGNPGVRCFALDQPKGNPCVPSPCGLNSECKLLNNRAVCSCL
# PGYLGDPKSGCQPECDINSDCGESLSCINHKCVDPCAGTICGINAICNVRQHTPVCHCLDGYAGDAFLQCVPIGILKNISRDPCAPSPCGPSDVCSVY
# GDGVALCDPCFGPNAQQNPRCRPECVTNSDCPFDRACLGQRCLDPCPGSCGRNAICNVYEHNPICTCPAGLFGNPYEQCAPPSPIVPTPTASCAKLQC
# GPNADCKRQSGGLACICRKGYFGNPYIGCRPECVLNSDCPAEKACLNSKCVDACSGVCGINAVCRVVNHAPVCVCADGFSGDAFLSCSPYYLPPPTES
# RNPCEPSPCGPNSRCLASTDGYAACSCLPNFKGAPPVCQPECVVSSECAPSQACINQRCADPCPGTCGIGARCEVLNHNPICSCESHFEGDPFVACSR
# IPEPPPDGKSPQNPCVPSPCGPNSICQIKQNRPVCSCVANYIGSPPYCRPECTLSSECPADKACIQEKCQSPCANTCGHNARCTVVAHSAHCSCDTGY
# EGDAFVGCSKVITQKPDDHYNPCYPNPCAENAVCTPHNGAARCSCIEPYFGDPYSTGCRPECIYNSECPSSLACIKQHCRNPCTGACGPNAECAVVNH
# LPTCSCTRGFEGDPFVGCKRTPVGPISVCEPNPCGPNSICRTIEGHPTCSCQVGYFGAPPTCRPECVVSSECAQNLACINQKCADPCSGTCGFNAKCQ
# VNNHNPICTCPKDYVGDPFEQCVPKPAERIPIVNPCLPNPCGPNALCRDVNNRAECSCAPGMFGAPPNCRPECVINQDCPSNRACIRQRCEDPCVGTC
# GFNALCTTQNHQPKCSCLDGYEGDPYTGCNMHQIVVPDVPSDPCYPSPCGANAVCRERNGAGSCSCIQNYFGDPYINCRPECVQNSDCPGSKACINMK
# CRDPCANACGFNAICRVAHHQPVCSCEPGFTGNPLRACVERPTNMYLPLPKDPCRPSPCGLFSTCQVVGSRPVCACLPDYMGSPPNCKPECLTSAECA
# PDRACVNQRCRDPCPGTCGYNARCRTTNHAPICSCFDGYTGDPFHQCLPEQKPIVVPDPIRPSNPCVPSPCGPNSQCQVSSTGAVCACLNNYIGRPPA
# CRPECTINSECPTRMACMNARCADPCIGSCGNNALCHVSFHAPVCMCQPGYTGDPFSGCYKIIEIPVETTQPCRPNPCGLNALCEERNRAAACKCLPE
# YFGDPYVECRPECVINSDCPKSRACVNQKCVDPCPGMCGHSAQCAVFNHAPNCECLPGYTGNPIVGCHLVSDIPRYPDPIVPENPCQPSPCGLYSICR
# AVNGHAVCSCVPNYVGAPPNCRPECMSSSECSQDKSCINERCKDPCPGTCGHNALCRVVNHNPICSCSPGYSGDPFVRCLPQEKRPIVSDRIDPCVPS
# PCGPNSQCRVSANEQPVCSCLQHYVGRAPNCRPECTSNSECAGNLACINLRCQNPCVGTCGIQTTCLVNNHRPICRCLEGYVGDPFSECSPQIIVPPE
# IAEPCNPSPCGANAVCKERNGVGSCTCLPDYSGDPYTECRPECVLNSDCSKNRACLNNKCRDPCPGVCGVAAECHVINHSPSCSCPAGYTGNPSQYCR
# EIPKSSDVITVGCKSNSDCPIAEACINAQCINPCNCGPNAECTVKNHHPICYCKPGFSGNAQFGCAPIGCQSADECAGDKQCTNHECVNPCLIADPCA
# LNAECYGRNHRASCRCPTGLEGDPFVRCVRLECHSDYDCASNLACVANQCVNPCAQSPCAQNAICQALQHRAVCRCPEQMPLGNPYAYCERRPVEPVC
# RDDGDCPSGLACIDAKCKNPCTELSPCARSAHCSVLDSVPVRTMVCECPESQVPDASGECRQLVLQSPPGCESDSDCGDQEACVNRQCRNPCNCGSNA
# VCQVQQHRAVCSCQDGFEGNPYAVCRSIGCRVDGECDSGKACINGNCINPCLVNDPCGPNAECYVQSSRAQCRCHSGYRGNPYERCRVIGCTSNNDCP
# TDKTCQNEQCVNPCVYRNICAPRAECRPQNHMAVCRCPSDFIGNPYVDCRPEPQPVCKLDTDCPARLACINEQCVDPCLVLEPCQRPAQCQVTPTAPV
# RTMICICPDGYISSGSGSCKPTTSIVKVGGCISDSDCPADKSCVSGICRNPCNCGVNAECRIKDHKPVCTCRQGYEGNPEFECAKIECTINSECPATH
# ACRNQLCIPACQGEQCGPNAECLAINHRAVCECAPGHGGNARLGCTPLGCRNDDECPSDKACVNGKCTNPCETTAICANDELCKVYQHRPQCACPPGT
# VPGRNGCEQERVVPICTSDGDCPTQRACLRGECVNPCNATQPCGVNAECRVLDTLPVRTMICECLEGYTGNAAVQCDKRSLCVIEKGFVRDVDGQCVC
# PPGSALDIYEYCTPCLVEQGYRIDESGHCVCALERGMVIDERGRCTCPIDLGYRLTPLGECVPVEQPECVTNEQCADNRFCNPETKTCEDPCLTKTCG
# VNAFCNAVNHRAQCQCITGYTGNPELHCNHTNFRTDFPRPDMVVSCLADGVQVEIHITEPGFNGVLYVKGHSKDEECRRVVNLAGETVPRTELFRVHF
# GSCGMQAVKDVASFVLVIQKHPKLVTYKAQAYNIKCVYQTGEKNVTLGFNVSMLTTAGTIANTGPPPICQMRIITNEGEEINSAEIGDNLRLQVDVEP
# ATIYGGFARSCIAKTMEDNVQNEYLVTDENGCATDTSIFGNWEYNPDTNSLLASFNAFKFPSSDNIRFQCNIRVCFGKCQPVNCGGYNAFGRRRRSIA
# DNSSDTTAIATSTGVEGQLREEITISSNAILTFEKRSGPGLNDANIKPAAQRVEDICVSMVGLIIALVITALLALVAVAVAVSCWLMAYRRRPKTLAP
# LPHPPEFPNPLFANPDAAPEPTPDYIS]
#
##gff-version	3
##query	GI17984%20[Drosophila%20mojavensis] 1 1761
scaffold_6500	Scipio	protein_match	23234669	23235055	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1 129
scaffold_6500	Scipio	protein_match	23236853	23236954	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 130 163
scaffold_6500	Scipio	protein_match	23241666	23241767	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 164 197
scaffold_6500	Scipio	protein_match	23243542	23243658	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 198 236
scaffold_6500	Scipio	protein_match	23245460	23245552	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 237 267
scaffold_6500	Scipio	protein_match	23246901	23247114	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 268 338
scaffold_6500	Scipio	protein_match	23247191	23247486	1.0	+	2	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 339 437
scaffold_6500	Scipio	protein_match	23247722	23248024	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 438 538
scaffold_6500	Scipio	protein_match	23248093	23249520	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 539 1014
scaffold_6500	Scipio	protein_match	23249650	23250186	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1015 1193
scaffold_6500	Scipio	protein_match	23250253	23250459	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1194 1262
scaffold_6500	Scipio	protein_match	23250533	23251226	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1263 1493
scaffold_6500	Scipio	protein_match	23251664	23251750	1.0	+	2	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1494 1522
scaffold_6500	Scipio	protein_match	23253391	23253602	1.0	+	2	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1523 1593
scaffold_6500	Scipio	protein_match	23254122	23254351	1.0	+	2	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1523 1599
scaffold_6500	Scipio	protein_match	23255790	23255918	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1594 1636
scaffold_6500	Scipio	protein_match	23256404	23256512	1.0	+	0	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1637 1672
scaffold_6500	Scipio	protein_match	23256865	23257130	1.0	+	2	gene_id=kassiopeia_gene_id337399 GI17984 [Drosophila mojavensis];Query=GI17984%20[Drosophila%20mojavensis] 1673 1761
# protein sequence = [MSQPRGGRGARGGGGAGGAGVGRKTPSSLTGPPDDSANTSERATPASKADSDPKDDSSSNGDKKDLDMFPAPKPPSAG
# ASIRDTANKVLALAMKSEWTPIEAELKKLEKYVANAGEDGNHIPLAGVHDMNTGMTPLMYATKDNRTAIMDRMIELGADVGARNNDNYNVLHIAAMYS
# REDVVKLLLNKRGVDPFSTGGSRSQTAVHLVSSRQTGTATNILRALLAAAGKDIRVKADGRGKIPLLLAVESGNQSMCRELLAAQTAEQLKATTANGD
# TALHLAARRRDVDMVRILVDYGTNVDTQNGEGQTPLHIAAAEGDEALLKYFYGVRASASIADNQDRTPMHLAAENGHAHVIEILADKFKASIFERTKD
# GSTLMHIASLNGHAECATMLFKKGVYLHMPNKDGARSIHTAAAYGHTGIINTLLQKGEKVDVTTNDNYTALHIAVESAKPAVVETLLGFGADVHVRGG
# KLRETPLHIAARVKDGDRCALMLLKSGASPNLTTDDCLTPVHVAARHGNLATMMQLLEDGGDPLYKSNTGETPLHMACRSCHPEIVRHLIETVKEKHG
# PDKATTYINSVNDDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALETAFHYCAVAGNNDVLMEMISHMNPTDIQKAMNRQSSIGW
# TPLLIACHRGHMELVNNLLANHARVDVFDTEGRSALHLAAERGYLHVCDALLTNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLR
# KQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSVKVIEELMKFDRSGVISA
# RNKLTDATPLQLAAEGGHADVVKALVRAGASCTEENKAGFTAVHLAAQNGHGQVLDVLKSTNSLRINSKKLGLTPLHVAAYYGQADTVRELLTSVPAT
# VKSETPTGQSLFGELGTESGMTPLHLAAFSGNENVVRLLLNSAGVQVDAATVENGYNPLHLACFGGHMSVVGLLLSRSAELLQSTDRNGRTGLHIAAM
# HGHFQMVEILLGQGAEINATDRNGWTPLHCAAKAGHLDVVKLLCEAGASPKSETNYGCAAIWFAASEGHNEVLRYLMNKEHDTYGLMEDKRFVYNLMV
# VSKNNNNKPIQEFVLVSPAPVDTAAKLSNIYITLSTKEKERAKDLVAAGKQCEAMATELLALAAGSDSAGKILQATDKRNIEFLDVLIENEQKEVIAH
# TVVQRYLQELWHGSLTWASWKIMLLLVAFIVCPPVWIGFTFPMGHKFNKVPIIKFMSYLTSHIYLMTHLSIVGITPIYPVLRLSLVPYWYEIGLLIWL
# SGLLLFELTNPSDKSGLGSIKVLVLLLGMAGVGVHVVAFLFVSKEYWPTLVYCRNQCFALAFLLACVQILDFLSFHHLFGPWAIIIGDLLKDLARFLA
# VLAIFVFGFSMHIVALNQSFANFTPEDLRSFEKKNRNRGYFSDDDMPTPRPPPVESYVDSRFSEFRRKHKDDRPMTPFLAFERLFFAVFGQTTTVDIN
# PMRHLRPEWTEVLFKFVFGIYLLVSVVVLINLLIAMMSDTYQRIQAQSDIEWKFGLSKLIRNMHRTTTAPSPLNLVTTWFIWIVEKVKARMKKKKRPS
# LVQMMGIRQASPRTKAGAKWLSKIKKDSVALSQVHLSPLGSQASFSAANQNRIENVADWEAIAKKYRALVGDEEGGSLKDSDAESGSQEGGGGGGGAP
# QAPAQVGKGKGKAVAKK]
#
##gff-version	3
##query	GI18200%20[Drosophila%20mojavensis] 1 537
scaffold_6500	Scipio	protein_match	28643629	28643692	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 1 21
scaffold_6500	Scipio	protein_match	28674756	28674816	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 1 20
scaffold_6500	Scipio	protein_match	28721388	28721527	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 22 68
scaffold_6500	Scipio	protein_match	28722408	28722452	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 69 83
scaffold_6500	Scipio	protein_match	28723214	28723258	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 84 98
scaffold_6500	Scipio	protein_match	28729586	28729630	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 84 98
scaffold_6500	Scipio	protein_match	28733598	28733707	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 99 135
scaffold_6500	Scipio	protein_match	28744556	28744736	1.0	+	1	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 136 195
scaffold_6500	Scipio	protein_match	28746008	28746083	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 196 220
scaffold_6500	Scipio	protein_match	28746523	28746717	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 221 285
scaffold_6500	Scipio	protein_match	28747479	28747565	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 286 314
scaffold_6500	Scipio	protein_match	28752080	28752166	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 315 343
scaffold_6500	Scipio	protein_match	28755662	28755748	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 315 343
scaffold_6500	Scipio	protein_match	28758219	28758328	1.0	+	2	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 344 380
scaffold_6500	Scipio	protein_match	28758395	28758609	1.0	+	0	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 381 452
scaffold_6500	Scipio	protein_match	28758678	28758851	1.0	+	1	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 453 510
scaffold_6500	Scipio	protein_match	28759446	28759527	1.0	+	1	gene_id=kassiopeia_gene_id337609 GI18200 [Drosophila mojavensis];Query=GI18200%20[Drosophila%20mojavensis] 511 537
# protein sequence = [MDSSSSCLSLFVALIFLVIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTN
# AWLNLDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFP
# FDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLSDFITNGEWYLLAMPGKKNTIVYQCCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFT
# LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTA
# DIHEMPPWIKSVFLQWLPWILRMGRPGRKITRKSILLSNRMKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEEHHTAIGCN
# HKDLHLILKELQFITARMRKADDEAELISDWKFAAMVVDRFCLIVFTLFTIIATVTVLLSAPHIIVQ]
#
##gff-version	3
##query	GI13986%20[Drosophila%20mojavensis] 1 773
scaffold_6525	Scipio	protein_match	1761	3236	1.0	-	0	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 1 492
scaffold_6525	Scipio	protein_match	1340	1606	1.0	-	0	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 493 581
scaffold_6525	Scipio	protein_match	1215	1282	1.0	-	0	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 582 604
scaffold_6525	Scipio	protein_match	1102	1157	1.0	-	1	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 605 622
scaffold_6525	Scipio	protein_match	640	1038	1.0	-	2	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 623 755
scaffold_6525	Scipio	protein_match	205	621	1.0	-	2	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 623 761
scaffold_6525	Scipio	protein_match	43	95	1.0	-	2	gene_id=kassiopeia_gene_id333532 GI13986 [Drosophila mojavensis];Query=GI13986%20[Drosophila%20mojavensis] 756 773
# protein sequence = [MEHESVSYGVTPPDATGRSSGSNTLLKEGESLLAAGGSSYSSSSYTAKKTQLQSQSQTQQSELFSSSSSSKIFKDFSD
# EKIIASIDLLESEKKEPVFSVPIEVVEITAPAGLISSASSGSISKMYASTSKVSSSRQQASSSSYFESSTTSSSQQQQQQQQRIDASETLIASERAAT
# GMTSSTLSNSKFVDVAEQVVSDSSNTNTITNTNININTNANTNTNTSTTTNINTNTSESQSVPKSVLGTAAVGVSADSSSTTTTTAKSMTSQRKPVPT
# TTNIATSSTLNELASSSSSTKNSNNNTSSISTTTAVNFDVEKATSSKTKLSSSKEVNRRESTTNQSSTKQSTASSKKEVYDVKTKTWTEYSEGSPPHG
# SNKKVPTFERYVSKDTDGTTKITYKKKIYDRRNNRWRVVDERTVDSSNDVGYPEIVDDVINTTTTTYTTKVYDTKLGKWTVVDEKSYTDSKAFVPNDI
# AREIEKDNTDVANITTTTEVTKIFDASINDWRVLDEKVHTDVIEKIVEAPKKTIYVDEFVEIEKNTSISENNESITLNLNETSKHKNITENIYDEIDY
# VRTDKKRLNDSRTRGVDKDRTTTHSEKCICEICTCGRHHCSTSTTKSTEIVEIDDNVDETYTRIRTNTWSKKDDNIPEKPEDIFVDYIVIKKPEDNLK
# TEGEFIVPEKEPYKPGERREKIIHTDNLRMDGEMTFVEKEEYQYVVRPGYVKPADNLKPEGEFFSPQKPKYQPGDRPTQVRHADNLKPEGQNISQVNG
# LLKYDQEII]
#
##gff-version	3
##query	GI21937%20[Drosophila%20mojavensis] 1 846
scaffold_6540	Scipio	protein_match	33935548	33935650	1.0	-	0	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 1 34
scaffold_6540	Scipio	protein_match	33934487	33935487	1.0	-	2	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 35 368
scaffold_6540	Scipio	protein_match	33934002	33934058	1.0	-	0	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 369 387
scaffold_6540	Scipio	protein_match	33933281	33933834	1.0	-	0	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 388 572
scaffold_6540	Scipio	protein_match	33933005	33933178	1.0	-	1	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 573 630
scaffold_6540	Scipio	protein_match	33932804	33932943	1.0	-	1	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 631 676
scaffold_6540	Scipio	protein_match	33932195	33932283	1.0	-	2	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 677 706
scaffold_6540	Scipio	protein_match	33931557	33931663	1.0	-	2	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 677 712
scaffold_6540	Scipio	protein_match	33931248	33931314	1.0	-	0	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 707 728
scaffold_6540	Scipio	protein_match	33930793	33931034	1.0	-	2	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 729 809
scaffold_6540	Scipio	protein_match	33930625	33930735	1.0	-	0	gene_id=kassiopeia_gene_id341235 GI21937 [Drosophila mojavensis];Query=GI21937%20[Drosophila%20mojavensis] 810 846
# protein sequence = [MSGKTAQGWGIITSHAYDISVQLCEYVICATLRIRKQKIYCAKCTKKCSGEVLRVADNHFHKACFQCCQCKKSLATGG
# FFTKDGSYYCIPDYQRLYGTKCATCQLYVEGEVVSTMGKTYHQKCFTCSKCTQPFKSGSKVTNTGKEVLCEQCVTGGAPASPVRNAGVQSPAPPAESP
# TRATAQQTTSGILSHKAHLKEDYDPNDCAGCGELLKEGQALVALDRQWHVWCFCCKSCNAVLNGEYMGKDAVPYCEKCYQKSFGVKCAYCNRFISGKV
# LQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQGSAIWHPRCGPGPSESGIILNGAGGGVVGGRPGTTSVTGGVSNGNFTDTECDRMSSSALSDMYIRS
# RTPSFNGSLYSSSRKHYRTVSPGLILREYGRPIGEDISRIYTYSYLTDAPHYLRKPIDPYDKTPLSPHFHRPTSYATTSNAGSVAGSRPPSRPHSRTR
# SAMKVLVDAIRSETPRPKSPGMNNEEPIELSHYPAAKKPPPGEQPKIERDDFPAPPYPYTDPERRRRYSDTYKGVPVSDDDDEENENGKRTNGKVKND
# EEQTRLQREAEQLEKLKSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSRNLDHQKPFCEDEMFDRSTSYRGSLG
# KSLGNAPSYNAIHSYRSPPKPGYGFKTTTLPPYIRNGYSSDFSYGGLGDKTHSTDLSCGKSEASVDSITEGDRRALMGGDLPVSSTYSGALSYHYPQA
# GLIRRSLPNMAHSMLVHEPAKIYPYHILLITNYRLPSDVDRCNLERHLSDIEFEHILQCTRSEFYRLPQWRRNELKRRVKLF]
#
##gff-version	3
##query	GI22070%20[Drosophila%20mojavensis] 1 383
scaffold_6540	Scipio	protein_match	31286890	31286947	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 1 19
scaffold_6540	Scipio	protein_match	31284217	31284299	1.0	-	2	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 20 47
scaffold_6540	Scipio	protein_match	31283029	31283136	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 48 83
scaffold_6540	Scipio	protein_match	31282647	31282727	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 84 110
scaffold_6540	Scipio	protein_match	31281584	31281667	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 84 111
scaffold_6540	Scipio	protein_match	31280455	31280511	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 111 129
scaffold_6540	Scipio	protein_match	31280288	31280393	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 130 164
scaffold_6540	Scipio	protein_match	31280086	31280222	1.0	-	2	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 165 210
scaffold_6540	Scipio	protein_match	31279854	31280009	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 211 262
scaffold_6540	Scipio	protein_match	31278538	31278900	1.0	-	0	gene_id=kassiopeia_gene_id341361 GI22070 [Drosophila mojavensis];Query=GI22070%20[Drosophila%20mojavensis] 263 383
# protein sequence = [MALIMKYIESINRYMDTHSDSRTKDWPMMSSPFPTLAVCLTYVYLVKVLGPRLMENRKPLHLQNLLVMYNALQVVFSA
# WLFYECLMGGWWGSYSFRCQPVDYSDSATSRRMVHACWWYYFSKFTEFMDTIFFVLRKKTSQVTTLHVIHHGCMPMSVWFGVKFTPGGHSTFFGLLNT
# FVHIVMYTYYMFSAMGPQYQKYLWWKKYLTTLQMVQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAYKNRLMKQNAALANGHAK
# PNGYCKSINAHDDLFLPQTTTTEATAAAASATAKANGNGNAALSNGHANGLKNGYKTLANGDAVTSLTNGSAHKSNGVLLANGFGNGNGYATQLLDDV
# AQELKHRKTPK]
#
##gff-version	3
##query	GI22307%20[Drosophila%20mojavensis] 1 123
scaffold_6540	Scipio	protein_match	27421483	27421500	1.0	-	0	gene_id=kassiopeia_gene_id341595 GI22307 [Drosophila mojavensis];Query=GI22307%20[Drosophila%20mojavensis] 1 6
scaffold_6540	Scipio	protein_match	27421293	27421420	1.0	-	0	gene_id=kassiopeia_gene_id341595 GI22307 [Drosophila mojavensis];Query=GI22307%20[Drosophila%20mojavensis] 7 49
scaffold_6540	Scipio	protein_match	27419939	27420066	1.0	-	0	gene_id=kassiopeia_gene_id341595 GI22307 [Drosophila mojavensis];Query=GI22307%20[Drosophila%20mojavensis] 7 49
scaffold_6540	Scipio	protein_match	27419654	27419876	1.0	-	1	gene_id=kassiopeia_gene_id341595 GI22307 [Drosophila mojavensis];Query=GI22307%20[Drosophila%20mojavensis] 50 123
# protein sequence = [MTAARLIFVTALVAVLATSCSAGLLDYVFPSIVTEFYQQAPTKEGYRFELKDPNGSSREEIGVIMNPDTPEEQLVVMG
# TYSTYDEKTDTDTITMYTADKDGYKTRYQIKNRKLSPGSLKSAAG]
#
##gff-version	3
##query	GI22407%20[Drosophila%20mojavensis] 1 679
scaffold_6540	Scipio	protein_match	25881745	25881851	1.0	-	0	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 1 36
scaffold_6540	Scipio	protein_match	25878698	25878742	1.0	-	1	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 37 51
scaffold_6540	Scipio	protein_match	25833701	25833748	1.0	-	1	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 37 52
scaffold_6540	Scipio	protein_match	25824541	25824585	1.0	-	1	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 37 51
scaffold_6540	Scipio	protein_match	25784539	25785178	1.0	-	1	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 52 264
scaffold_6540	Scipio	protein_match	25779448	25780160	1.0	-	0	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 265 502
scaffold_6540	Scipio	protein_match	25778855	25779386	1.0	-	1	gene_id=kassiopeia_gene_id341695 GI22407 [Drosophila mojavensis];Query=GI22407%20[Drosophila%20mojavensis] 503 679
# protein sequence = [MLFENPAVAAKLPFPYNVPPPLQAAAAAAAAVPNLRFQTPIKAFACLTATSNPIDNAAAAAAAAAAGLIDPHHNRDLH
# NALVASIANSNVAAINGTLTTAAVLKSAAAAQAAQVQQTQQQSAAGQQAGQQQQQQSTAGQDQASAQSNGNQQQAAAAAQQQQQQQQQQQQQQQQQAQ
# QAALALLKVDNVNAVAVQNGSGANLSIKSSSSGRSTPSNSGGSLSDPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITF
# QEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVC
# EIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQLPAAPGQLLGARSAAGVAAAMNPLAMLQTPTQLLQSPAAAAAAQQAALISQNPFQV
# QNAAAAATMAANQSNFGKLLATYPQTALHSVRYAPYTIPASAATANAALMQAHQAQNVAAMSAHQQQQSHNAAHAHAAVAAAAGLHQQHSHHHQQQQQ
# QQQQQQQHHHNAAVAAAAAASNNAATQVHSAAAAAALAANAANGAGANAHSLAAAQQAALVAGNPLNAAAAAAAAAANPAAAYPNYALANVDMSSFQG
# VDWSSMYGMGMYV]
#
##gff-version	3
##query	GI22423%20[Drosophila%20mojavensis] 1 493
scaffold_6540	Scipio	protein_match	25390899	25390960	1.0	-	0	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 1 21
scaffold_6540	Scipio	protein_match	25389836	25389948	1.0	-	1	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 22 58
scaffold_6540	Scipio	protein_match	25389406	25389473	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 59 81
scaffold_6540	Scipio	protein_match	25386501	25386555	1.0	-	0	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 82 99
scaffold_6540	Scipio	protein_match	25386369	25386436	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 100 122
scaffold_6540	Scipio	protein_match	25383775	25383845	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 100 123
scaffold_6540	Scipio	protein_match	25380208	25380277	1.0	-	0	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 123 145
scaffold_6540	Scipio	protein_match	25379906	25380142	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 146 224
scaffold_6540	Scipio	protein_match	25379605	25379739	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 225 269
scaffold_6540	Scipio	protein_match	25376396	25376548	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 270 320
scaffold_6540	Scipio	protein_match	25376062	25376241	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 321 380
scaffold_6540	Scipio	protein_match	25374644	25374750	1.0	-	2	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 381 416
scaffold_6540	Scipio	protein_match	25373355	25373479	1.0	-	0	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 417 458
scaffold_6540	Scipio	protein_match	25372112	25372217	1.0	-	1	gene_id=kassiopeia_gene_id341711 GI22423 [Drosophila mojavensis];Query=GI22423%20[Drosophila%20mojavensis] 459 493
# protein sequence = [MGTGHYFWAIFYFTSLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVRINLFVRSIMTISD
# IKMQKQLKRELHGQPVRCQLTNGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHN
# IIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSC
# LKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYA
# SRSGLNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPLVRHPGDPLALEKLRQCEVHMQPPKRPSCCKTWLSKFPTRSKRIDVISRITF
# PLVFALFNLVYWSTYLFREEEDE]
#
##gff-version	3
##query	GI22588%20[Drosophila%20mojavensis] 1 226
scaffold_6540	Scipio	protein_match	22457685	22457794	1.0	-	0	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 1 37
scaffold_6540	Scipio	protein_match	22457397	22457627	1.0	-	1	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 38 114
scaffold_6540	Scipio	protein_match	22457159	22457281	1.0	-	1	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 115 155
scaffold_6540	Scipio	protein_match	22456888	22457101	1.0	-	1	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 156 226
scaffold_6540	Scipio	protein_match	22455790	22455912	1.0	-	1	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 115 155
scaffold_6540	Scipio	protein_match	22455518	22455731	1.0	-	1	gene_id=kassiopeia_gene_id341873 GI22588 [Drosophila mojavensis];Query=GI22588%20[Drosophila%20mojavensis] 156 226
# protein sequence = [MGSTQHPDFEENFLLKPSKVDDLFKFLDEIGKANKMEKKKDEKVEVDLSAGVTETNFLVMERCPQGTKKPSIKKSSVQ
# SSNLNQMTFMRQIDVTPNQRNTARMERVRVANNYRRLGNAEFRKPNYEKAIEMYSKGLQYISDTQVLYLNRALCYVKKRAFKRALIDLDYILLNLDER
# CLRAWLIRAGTCKRMNDERGYQTAVDNARSLNPSQGKYIDYFLDKVRSDF]
#
##gff-version	3
##query	GI22766%20[Drosophila%20mojavensis] 1 387
scaffold_6540	Scipio	protein_match	19215011	19215137	1.0	-	0	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 1 42
scaffold_6540	Scipio	protein_match	19203364	19203451	1.0	-	2	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 43 72
scaffold_6540	Scipio	protein_match	19161920	19162007	1.0	-	2	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 43 72
scaffold_6540	Scipio	protein_match	19159421	19159496	1.0	-	1	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 73 97
scaffold_6540	Scipio	protein_match	19159205	19159301	1.0	-	0	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 98 129
scaffold_6540	Scipio	protein_match	19153378	19153567	1.0	-	2	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 130 193
scaffold_6540	Scipio	protein_match	19152870	19153271	1.0	-	1	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 194 327
scaffold_6540	Scipio	protein_match	19152245	19152398	1.0	-	1	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 328 378
scaffold_6540	Scipio	protein_match	19150761	19150787	1.0	-	0	gene_id=kassiopeia_gene_id342048 GI22766 [Drosophila mojavensis];Query=GI22766%20[Drosophila%20mojavensis] 379 387
# protein sequence = [MQQHETRQPASSCSSAEQVRAGDEQESYSAANFKGISRRRRQKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVR
# DPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEEVLQKTFAPYG
# AIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKESGDPNNSQTMASQALNSAAAAAAGFPYGVSAAAAAAAAYGQQLAATGCWY
# SPTPTYPASSVTAAAATPAAAAANAAAVQNQFLQGIQGYHFSQYGGYQQGYMGMGVQIPATWQGVTQAQISPAQQLATGVAGTAIPQAAGVVAYPIQQ
# FQVSPQVYPLLLQAQ]
#
##gff-version	3
##query	GI22798%20[Drosophila%20mojavensis] 1 834
scaffold_6540	Scipio	protein_match	18453146	18453235	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 1 30
scaffold_6540	Scipio	protein_match	18422171	18422266	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 1 32
scaffold_6540	Scipio	protein_match	18409342	18409995	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 31 248
scaffold_6540	Scipio	protein_match	18355095	18355218	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 249 289
scaffold_6540	Scipio	protein_match	18345028	18345293	0.987	-	2	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 290 378
scaffold_6540	Scipio	protein_match	18334960	18335295	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 379 490
scaffold_6540	Scipio	protein_match	18334600	18334885	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 491 585
scaffold_6540	Scipio	protein_match	18334067	18334260	0.987	-	2	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 586 650
# gap 651 661
scaffold_6540	Scipio	protein_match	18326211	18326304	0.987	-	0	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 662 692
scaffold_6540	Scipio	protein_match	18320220	18320436	0.987	-	2	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 693 765
scaffold_6540	Scipio	protein_match	18319593	18319670	0.987	-	1	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 766 791
scaffold_6540	Scipio	protein_match	18319394	18319523	0.987	-	1	gene_id=kassiopeia_gene_id342079 GI22798 [Drosophila mojavensis];Query=GI22798%20[Drosophila%20mojavensis] 792 834
# protein sequence = [MMSCPLPMPLPIPIPSIHKTEFTPVHIGVKQMQLLQAPPPTHPHHLHLQHPAAAAAAAAAAAAGAYQAYPTGATAAML
# QQSNVVAVQQHHQQQQQQQQQQQQQQQQQHAMLLHHQAAAAAVAAQQQQQQQQQAQHQQQLQLQQQQQHHQAQQQQAAQQQFHYQQQAQVQAHAMLQT
# YMQLQVNNVAAAPATPTKYASAGMAAGGAQYFAAPTTPLTIIPACSGAAVAAAAMFATAATPTSAATTPSNNRGSDELLSQAAVMAPASDNNNQDLAT
# KKAKLDSSTVLAGGIAKASKVIHLRNIPNESGESDVVALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVNPPQMRGRMVYVQFSNHRELK
# TDQSHNNSSAVQSDYRIQSPAGGSPLPLCAAANATSNNANNSAENNCSTVAILQNNTSAVNASAGSNNTNAAGGPNTVLRVIVETLMYPVSLDILHQI
# FQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVDLMPTAGGLMNTND
# LLLIAARQRPSLTGDKIVNGLGAPGVLPPFALGLGTPLSGGYSNALPNLAAFSLANSGALQTAAPAMRGYSNVLLVSNLNEE...........GVYGD
# VQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNI
# PSSCTEDDIKEAFTSNNFEVKAFKFFPKDRKMALLQLSSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI]
#
##gff-version	3
##query	GI22927%20[Drosophila%20mojavensis] 1 914
scaffold_6540	Scipio	protein_match	15570435	15570633	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 1 66
scaffold_6540	Scipio	protein_match	15568689	15569927	1.0	-	2	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 67 479
scaffold_6540	Scipio	protein_match	15565954	15566117	1.0	-	2	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 480 534
scaffold_6540	Scipio	protein_match	15562428	15562561	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 535 579
scaffold_6540	Scipio	protein_match	15562139	15562256	1.0	-	1	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 580 618
scaffold_6540	Scipio	protein_match	15560793	15560910	1.0	-	1	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 580 618
scaffold_6540	Scipio	protein_match	15557606	15557676	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 619 642
scaffold_6540	Scipio	protein_match	15556925	15556995	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 619 642
scaffold_6540	Scipio	protein_match	15556318	15556393	1.0	-	1	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 643 667
scaffold_6540	Scipio	protein_match	15556105	15556167	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 668 688
scaffold_6540	Scipio	protein_match	15555395	15555457	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 689 709
scaffold_6540	Scipio	protein_match	15553732	15553801	1.0	-	0	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 710 732
scaffold_6540	Scipio	protein_match	15551045	15551506	1.0	-	2	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 733 886
scaffold_6540	Scipio	protein_match	15550059	15550502	1.0	-	2	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 733 880
scaffold_6540	Scipio	protein_match	15549106	15549188	1.0	-	2	gene_id=kassiopeia_gene_id342207 GI22927 [Drosophila mojavensis];Query=GI22927%20[Drosophila%20mojavensis] 887 914
# protein sequence = [MYEKTLTIGTAKVNNAYEWQKVSYSKNQSTSTAKAAAATASASVAKTKQKQQKPKTTLTKTAKNATGSSAAAAGQQAK
# TTKQQQQQQRNRRIINANKQSQSHKSEQQKHKQKKQSNSKRGKNGSDGCKSELSSRWGSIEEQLNVLDKLLYYDEKAELYLAQLYNNYQQLQRSQSEL
# SDDWSWSNSDSEMSQSNSVDDDALSSTSGAGSHSTINSNSNASSLVPSSLKRRGHQHHPRFAGTRRPNVPNVQEILAALYRGDSKGVLSNLRGESTPQ
# TQPPTEEQPVASRSSLSLPLSESVTNSLGSNSPTPTDESSMLDETMPAVTPAAATAGEPDALPAASSKKKKKRDKGDKEKSDRKKKSSSSTGGKRERS
# KRQGGSGGIMDVSSDSIATDLSAGAIDEGIVLNPEDEDSQAQEWAKLRCTSEAAEIVAEREARRNKGRCADYPGLAFGRSIFSSDTMMKFNIIRNELH
# NIMNTQLKRVQKTSTKMTTSIPQGTLLDVLKKKMRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSATAKLS
# EASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIAEEADKKYEEVARKLAMVEADLERAEERAEQGENKIVELEEELRVVGNNLKSLEVSEE
# KANQREEEYKNQIKTLNTRLKEATQKEETFETQIKVLDHALKEAEARAEFAERSVQKLQKEVDRLEDEMINEKEHYAIINDSLDFTFVELMGMPPFYN
# DRYPKPPTPELTEEEIAAIAAQREAAAAAKAAKLAAEGAAEGAGEGEGAEIEAAAADGAAADEAAAVAEVIEEPVRVPTPPPPPPFDYNIDLPPEGAE
# VPYVKNFEVGDAPPAAPADAAPAEDDLVLEKERYKDIGDDLDTAFVELILKE]
#
##gff-version	3
##query	GI22941%20[Drosophila%20mojavensis] 1 461
scaffold_6540	Scipio	protein_match	15469227	15469252	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 1 9
scaffold_6540	Scipio	protein_match	15451188	15451390	1.0	-	1	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 10 76
scaffold_6540	Scipio	protein_match	15446485	15446595	1.0	-	2	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 77 113
scaffold_6540	Scipio	protein_match	15445410	15445561	1.0	-	2	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 114 164
scaffold_6540	Scipio	protein_match	15443576	15443727	1.0	-	2	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 114 164
scaffold_6540	Scipio	protein_match	15442236	15442350	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 165 202
scaffold_6540	Scipio	protein_match	15441899	15442167	1.0	-	2	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 203 292
scaffold_6540	Scipio	protein_match	15441261	15441431	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 293 349
scaffold_6540	Scipio	protein_match	15439948	15440028	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 350 376
scaffold_6540	Scipio	protein_match	15438640	15438738	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 377 409
scaffold_6540	Scipio	protein_match	15436130	15436236	1.0	-	0	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 410 445
scaffold_6540	Scipio	protein_match	15435897	15435945	1.0	-	1	gene_id=kassiopeia_gene_id342221 GI22941 [Drosophila mojavensis];Query=GI22941%20[Drosophila%20mojavensis] 446 461
# protein sequence = [MQRRERQASGGGPQTTTAGPSAGNVANATIAGGKSTSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGK
# NLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHAEGVPEVYYFGPCGKYNALVMELLGPSLEDLFDICGRRFTLKSVLLIAIQLLHRIEYVHSRHL
# IYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADT
# LKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFERKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHN
# VTAKTNAKGGVAAWPDVPKPGATLGNLTPADRHGSVQVVSSTNGELNADDPTAGHSNTPITQQPEVELVDETKCCCFFKRKKKKSTRQK]
#
##gff-version	3
##query	GI22989%20[Drosophila%20mojavensis] 1 684
scaffold_6540	Scipio	protein_match	14820401	14820460	1.0	-	0	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 1 20
scaffold_6540	Scipio	protein_match	14815321	14815377	1.0	-	0	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 1 19
scaffold_6540	Scipio	protein_match	14802142	14802502	1.0	-	0	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 21 140
scaffold_6540	Scipio	protein_match	14801473	14802073	1.0	-	2	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 141 341
scaffold_6540	Scipio	protein_match	14800568	14801414	1.0	-	1	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 342 623
scaffold_6540	Scipio	protein_match	14800310	14800492	1.0	-	0	gene_id=kassiopeia_gene_id342268 GI22989 [Drosophila mojavensis];Query=GI22989%20[Drosophila%20mojavensis] 624 684
# protein sequence = [MDDKFIIFNAARDDNLPLLKNVLYNKSPAEISALISAKVNGATPLVISCRNGHYDIVEYLLTKCRADVEQVGSVSFDG
# EPIEDAPPLWCAAAAGHLGIVKMLVRRFANVNSTTRTNSTPLRAACFDGHYEIVKYLVHHGADFEVANRHGHTCLMIACYKGHYRIAQYLLSLNADVN
# RCSIKGNTALHDCAESGSLQILQLLLKHGATMDVDYYGMTPLLAASVTGHMPIVEHLITLPCVSRMARIDALELLGATYVDKKRDMAVALSLWRRALE
# ERAQEPQLHKKVQEPVPAYEMVTEVTTIEELEELVLDPDEMRMQALVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWSYALTMQQKILQPL
# SPMTQSSLLSFAELFSFMLVEAGRLLPRGRIVPPIEADGMLTIFHKAVLEVERGQAFTLEQHQHQQLLPCGNKQLTQSPSSSSTSSSSSSSSSSSSSS
# SSSTASSTSASSSTTLLSAHQHDCNHDPNALSRTLVSALHIGCLLSSLLDSDSFCPEMRRQVMNALYRLNRLNVHVRFGRTALHYACYREGTLVGRYP
# SCQFPSVSLAKALLEVGADPNAVDDSGNTPLHLAATLQPYIEPLAQTLLQGGAHLDTKNDAGETFESLLAPTPLHKIVDPMKYTTLACLAARTIKQHS
# LQYEGVVPRALYQFIELH]
#
##gff-version	3
##query	GI23029%20[Drosophila%20mojavensis] 1 105
scaffold_6540	Scipio	protein_match	13926819	13926913	1.0	-	0	gene_id=kassiopeia_gene_id342308 GI23029 [Drosophila mojavensis];Query=GI23029%20[Drosophila%20mojavensis] 1 32
scaffold_6540	Scipio	protein_match	13916803	13916867	1.0	-	0	gene_id=kassiopeia_gene_id342308 GI23029 [Drosophila mojavensis];Query=GI23029%20[Drosophila%20mojavensis] 1 22
scaffold_6540	Scipio	protein_match	13905459	13905678	1.0	-	1	gene_id=kassiopeia_gene_id342308 GI23029 [Drosophila mojavensis];Query=GI23029%20[Drosophila%20mojavensis] 33 105
# protein sequence = [MALAAAAAAAATAAAAAAATAIEKHLQQRQQNSNNSHHKSSNSNNINNKPTITKVPKVTNTGPLSSCPRLPRLTPSPT
# DSLANPICACMSTVSMQQQQQQQQQQQ]
#
##gff-version	3
##query	GI23276%20[Drosophila%20mojavensis] 1 575
scaffold_6540	Scipio	protein_match	9753858	9753947	1.0	-	0	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 1 30
scaffold_6540	Scipio	protein_match	9753614	9753777	1.0	-	0	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 31 85
scaffold_6540	Scipio	protein_match	9753324	9753553	1.0	-	1	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 86 161
scaffold_6540	Scipio	protein_match	9752976	9753208	1.0	-	1	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 86 162
scaffold_6540	Scipio	protein_match	9752579	9752802	1.0	-	1	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 86 159
scaffold_6540	Scipio	protein_match	9751278	9752518	1.0	-	2	gene_id=kassiopeia_gene_id342552 GI23276 [Drosophila mojavensis];Query=GI23276%20[Drosophila%20mojavensis] 162 575
# protein sequence = [MLVRHIFIYLLLSSYALAQICTVNKYVGNKLKKVQVCCNGYYRTRSAKLECSPICKNCRKGKCIKPNVCQCFAGYDNF
# NHLPNAYCVPKCKGDCKNGYCGSPGKCKCAQRYKLDEATGHCLPICEKGCPNGTCKLPGICICNENYTLNIKSKICQPICKAGFTENRCAPECKDGCE
# NGVCSAPGKCTCIEGYSPVTENRCAPECKDGCENGVCSAPGKCTCIEGYSPVTENRCAPECKDGCENGVCSAPGKCTCNDGYFPVSENRCAPECKDGC
# ENGVCSAPGKCTCNEGYSPVTENRCAPECKDGCENGVCSAPGKCTCNEGYFPVSENRCTPECKDGCENGVCSAPGKCTCNEGYFPVSENRCAPECKDG
# CENGVCSAPGKCTCNEGYFPVSENRCAPECKDGCENGVCSAPGKCTCNEGYFPVSEIRCAPECKDGCENGFCSAPGKCTCNEGYFPVSENRCAPECKD
# GCENGFCSAPGKCTCNEGYSPVTENRCAPECKAGCDNGFCSAPGKCTCNEGYFPVSENRCAPECKDGCEKGVCSAPGKCTCNEGYSPVTANRCAPECK
# WMRERFL]
#
##gff-version	3
##query	GI23327%20[Drosophila%20mojavensis] 1 399
scaffold_6540	Scipio	protein_match	8954198	8954970	1.0	-	0	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 1 258
scaffold_6540	Scipio	protein_match	8953783	8954140	1.0	-	1	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 259 377
scaffold_6540	Scipio	protein_match	8952064	8952836	1.0	-	0	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 1 258
scaffold_6540	Scipio	protein_match	8951649	8952006	1.0	-	1	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 259 377
scaffold_6540	Scipio	protein_match	8950052	8950824	1.0	-	0	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 1 258
scaffold_6540	Scipio	protein_match	8949637	8949994	1.0	-	1	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 259 377
scaffold_6540	Scipio	protein_match	8948037	8948809	1.0	-	0	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 1 258
scaffold_6540	Scipio	protein_match	8947625	8947982	1.0	-	1	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 259 377
scaffold_6540	Scipio	protein_match	8947500	8947565	1.0	-	0	gene_id=kassiopeia_gene_id342602 GI23327 [Drosophila mojavensis];Query=GI23327%20[Drosophila%20mojavensis] 378 399
# protein sequence = [MTGIFRQIHPAPLVVRIRSRECCSYLFRALKFLGWMPPKQGIPRYLHLLYTCFFFYFPLIYGPLGLLRGLISNLKSFS
# PGEFLTLLPLDINSLGVSIKSFILYIYMTRVYETLSTLDDLDERLKNDSDRRKIHAAVARSNYIFFVYAQLYLSYTVSVFIIGVLNGHPPWLIYNPIF
# DWRDSVGNFWLQTIFEYLVFLFQTTLALISDTYTIVLLVNFRAHIDVLKDHIRNLRTDPQQTEKENYDELVSNIIYHKLILRCCNVMRPVISQTIFVQ
# FLLIGIDLGLTLVNVLYFSGLFRAISAIMFALAVMVETFPFCYLCDLLAKDCEDLSNILFDSPWIDAEPKYKSALKFFMHNLQQPIVFKAGGIFAISL
# NSNIQMAKFAFSVMAIVQQMNLASRFK]
#
##gff-version	3
##query	GI23334%20[Drosophila%20mojavensis] 1 1761
scaffold_6540	Scipio	protein_match	8737979	8738199	1.0	-	0	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 1 74
scaffold_6540	Scipio	protein_match	8734597	8734832	1.0	-	1	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 75 152
scaffold_6540	Scipio	protein_match	8734321	8734592	1.0	-	1	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 75 164
scaffold_6540	Scipio	protein_match	8733963	8734030	1.0	-	2	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 165 187
scaffold_6540	Scipio	protein_match	8723329	8723532	1.0	-	0	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 188 255
scaffold_6540	Scipio	protein_match	8723122	8723273	1.0	-	0	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 256 306
scaffold_6540	Scipio	protein_match	8722387	8723064	1.0	-	1	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 307 532
scaffold_6540	Scipio	protein_match	8722184	8722321	1.0	-	1	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 533 578
scaffold_6540	Scipio	protein_match	8721374	8721828	1.0	-	1	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 579 729
scaffold_6540	Scipio	protein_match	8720102	8721304	1.0	-	2	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 730 1130
scaffold_6540	Scipio	protein_match	8718874	8720039	1.0	-	2	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 1131 1519
scaffold_6540	Scipio	protein_match	8718090	8718815	1.0	-	0	gene_id=kassiopeia_gene_id342609 GI23334 [Drosophila mojavensis];Query=GI23334%20[Drosophila%20mojavensis] 1520 1761
# protein sequence = [MAEQIGQRIGLGWAVFVAMGWAAVQRMHCIMAGYGAHLFATSGIGLGNPIVESGLLYGYGNQYMCYVWQMLVFRSSSS
# SSSSSGNISSSSSSSSSSSGNISSSSSSSSSSSGNISSSSSSSSSSSGNISSSSSSSSSSSGNISSSSSSSSSSSGNISSSSSSSREICEKCFNINFW
# LMQHAVVTCVQVVKNKKKKLNDFVAETLANISQRFRLLHGQLQIAEQKAIEMLRESSQSPQQQLDGAISQLNGYEAVLKNLRQLLNGGVDDRCEVPKD
# VWLRDIFMIINEHLEKIPTYVEVTNIDRNPYHLETNNNLSDMISRYLKCQYRNPKIEVRFNNEYGYQSVISNTSLPQESNWPSQSVQPTASIGSIQSR
# LGKKQKRRPKKSESSSSSVHDSDSDRHVQHLNFLRTFSAMDISKSDSSHSSAKTVSCQLGDWFRTDAVVRVRAIQSPEDFYVQCIEAAQKMRENLEAF
# SESPNCRPPSLIVVGQQYITYHNQTEMDRWHRALVIRKAESREIYNVFLPDIGISRKVHRSNFRQLPENLATLPYTAVHCSLKQLMPSNGGTEWEPQA
# IDFLKQVVQNNPVHITVIRALGTQLYEVDLITNNCDSSISVREAFLYTGLARERNVVGAPLMPQSQQLMALEPQRLPKYGPRVGDVMMIQMLHVEQPQ
# EFYVMPHKLEQKRSAMQRELQCFMDHMSLSQLEPIYLGRLEMGCVVQSEGQWHRASIQHILPKGYVLVRLVDSGITQKLYWDQLFMLPRIFWTQESAI
# KCCLADVEPLQANGYAWTTAAIDAFKQLTSNPKLQMEVVSVHNKEANVALYYGNYHVAAMLVSQGHCESTGVSSKVIKPQQTRLSKLCVDTRKLMDEV
# KEEPLDAAPQPKQTDNTNRSPIEMLHVQHPGEFYVTLAHFVSAIAELRKTVQATAAEMYQSCAASANWERGDMCYVRVMAKGDQELLWHRGQIVDCTD
# SNTTSKYDVRLRDIGELVLGVPSNCLAVMDEALVRISNSAMCCRLFGLVPNGKEWSDQAKAFFKTQLETYSSLHVTGYGRSGDRLNVVLWGARTEISG
# PFSPAHTKYTNINEMLLQAGHAKRDPQMLVKEEAESTSSSSSGGDSISCSVCSKKSCDQDMFAGFDNIEKSESPQVVVKLEFEHSYGMPPLELLNDFN
# TNTTTTGCDEAPLAWLQPRECNKSLFTALPTYVNHQCEIYLSLASDEPFIHHMRNLLANHFKPLMEQQRKPSSYVVGQPVVATYHLDNLFYRGIVQSQ
# LSAKGEHKVYYVDYGNEEEVSPADMLPYAPFPQLNAMCWRIAIHGVKPKQKKYTIKTMDAVHQTVVMKLSSVRVIEVRGVNGIPQCQIKVGDMDIATM
# MLNNEMAVRTASQADEELKHQRAKALKSFKVFDELIQLGDVQPPQILDQVNTTVQPPPAKKKLMMDSKEMIQTECEKDFDCKEAAKLDQLDRSVNLEE
# SENDQDNSEENNSAEAFSDDYIIDEIGAVNSNKNDEKTASLEQEEASFMPPQNISAVDQLRRRIQLRYKERMKSAQFSPMDTSTERSYHESIGCFKSQ
# CLPTGVKHFPCTIDKVVSATELQITPELTEFAKQEIVLAQETSALIRDAAQLNPVEMESLCLARYSLDGQWYRAVIKEVFHASSQATVYYMDFHDTGM
# VRFIDLKVMPKQLFMFPQRSFRVNLYGIKLNRKFADPPVRQALQACLCKYPTVYARVHYPHNYNDSDDYAESEPDSSSDSTKKSYKLLEVEIFENRST
# TELLYKPLIDSRMLLLK]
#
##gff-version	3
##query	GI23563%20[Drosophila%20mojavensis] 1 56
scaffold_6540	Scipio	protein_match	5278917	5278979	1.0	-	0	gene_id=kassiopeia_gene_id342826 GI23563 [Drosophila mojavensis];Query=GI23563%20[Drosophila%20mojavensis] 1 21
scaffold_6540	Scipio	protein_match	5268465	5268527	1.0	-	0	gene_id=kassiopeia_gene_id342826 GI23563 [Drosophila mojavensis];Query=GI23563%20[Drosophila%20mojavensis] 1 21
scaffold_6540	Scipio	protein_match	5262582	5262641	1.0	-	0	gene_id=kassiopeia_gene_id342826 GI23563 [Drosophila mojavensis];Query=GI23563%20[Drosophila%20mojavensis] 1 20
scaffold_6540	Scipio	protein_match	5250719	5250778	1.0	-	0	gene_id=kassiopeia_gene_id342826 GI23563 [Drosophila mojavensis];Query=GI23563%20[Drosophila%20mojavensis] 1 20
scaffold_6540	Scipio	protein_match	5247073	5247177	1.0	-	0	gene_id=kassiopeia_gene_id342826 GI23563 [Drosophila mojavensis];Query=GI23563%20[Drosophila%20mojavensis] 22 56
# protein sequence = [MSPKVVAGAVAGAVAEDEAEAAQDVSTHPQMLQMLRGRPSADQLHRTGQKWWWHLH]
#
##gff-version	3
##query	GI23689%20[Drosophila%20mojavensis] 1 272
scaffold_6540	Scipio	protein_match	3198284	3198300	1.0	-	0	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 1 6
scaffold_6540	Scipio	protein_match	3191697	3191727	1.0	-	1	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 7 16
scaffold_6540	Scipio	protein_match	3191506	3191617	1.0	-	0	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 17 53
scaffold_6540	Scipio	protein_match	3191285	3191436	1.0	-	2	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 54 104
scaffold_6540	Scipio	protein_match	3190397	3190474	1.0	-	0	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 105 130
scaffold_6540	Scipio	protein_match	3190057	3190137	1.0	-	0	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 105 131
scaffold_6540	Scipio	protein_match	3189727	3189836	1.0	-	0	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 131 167
scaffold_6540	Scipio	protein_match	3189401	3189580	1.0	-	1	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 168 227
scaffold_6540	Scipio	protein_match	3189188	3189323	1.0	-	1	gene_id=kassiopeia_gene_id342949 GI23689 [Drosophila mojavensis];Query=GI23689%20[Drosophila%20mojavensis] 228 272
# protein sequence = [MQIKEFRVTLPLTVEEYQIAQLFTVAEASKENTGGGEGIEVLKNEPFENFPLLGGKYNSGQYTYKIYHLQSKVPAFIR
# LLAPKGSLEIHEEAWNAYPYCRTVITNPKFMKDAFKITIDTLHVSDSGESENVHELSPEKLKLREVVYIDIANDSVLPADYKPEEDPTTYKSKKTGRG
# PLLGPDWKKRVDPVMTCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMDDIRAIEDEVKEELDKARQTGTVRGMRADGD]
#
##gff-version	3
##query	GI23696%20[Drosophila%20mojavensis] 1 194
scaffold_6540	Scipio	protein_match	3076105	3076581	1.0	-	0	gene_id=kassiopeia_gene_id342956 GI23696 [Drosophila mojavensis];Query=GI23696%20[Drosophila%20mojavensis] 1 159
scaffold_6540	Scipio	protein_match	3069212	3069298	1.0	-	0	gene_id=kassiopeia_gene_id342956 GI23696 [Drosophila mojavensis];Query=GI23696%20[Drosophila%20mojavensis] 160 188
scaffold_6540	Scipio	protein_match	3052126	3052230	1.0	-	0	gene_id=kassiopeia_gene_id342956 GI23696 [Drosophila mojavensis];Query=GI23696%20[Drosophila%20mojavensis] 160 194
# protein sequence = [MKSNQSLKLTRRDMKRMEKIYLVALLFVAIGLSQMAIARTTRFDLRGTVPMPCLMWLVIGLVCIILMVYTELHDTFPI
# NWTLGFVTVESMTLCVICYDWTSMSSWLASAVVLAVLVLNVILYGIASSCPLCCIPTYRAMLIATIVYTIVYILTVIVVFSILLTAVLAIWASGCNAA
# LNTIPEEKWEELPPLPVD]
#
##gff-version	3
##query	GI23792%20[Drosophila%20mojavensis] 1 213
scaffold_6540	Scipio	protein_match	743621	743716	1.0	-	0	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 1 32
scaffold_6540	Scipio	protein_match	739772	739813	1.0	-	0	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 33 46
scaffold_6540	Scipio	protein_match	723941	723989	1.0	-	0	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 47 62
scaffold_6540	Scipio	protein_match	715827	715875	1.0	-	0	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 47 62
scaffold_6540	Scipio	protein_match	688568	688685	1.0	-	2	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 63 102
scaffold_6540	Scipio	protein_match	654264	654392	1.0	-	1	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 103 145
scaffold_6540	Scipio	protein_match	645679	645823	1.0	-	1	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 146 193
scaffold_6540	Scipio	protein_match	637683	637742	1.0	-	0	gene_id=kassiopeia_gene_id343051 GI23792 [Drosophila mojavensis];Query=GI23792%20[Drosophila%20mojavensis] 194 213
# protein sequence = [MPAEPSDEIPGPQVPKTELEELQIKSQSVADESLESTRRMLALCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINAD
# MREAEKNLSGMEKCCGICVLPCNKSQSFKEDDGTWKGNDDGKVVNNQPQRVMDDRNGMMAQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDM
# GSELENQNRQIDRVNRKGESNEARIAVANQRAHQLLK]
#
##gff-version	3
##query	GI23970%20[Drosophila%20mojavensis] 1 557
scaffold_6540	Scipio	protein_match	4158525	4158728	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 1 68
scaffold_6540	Scipio	protein_match	4159076	4159120	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 69 83
scaffold_6540	Scipio	protein_match	4159508	4159617	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 84 120
scaffold_6540	Scipio	protein_match	4161067	4161247	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 121 180
scaffold_6540	Scipio	protein_match	4163762	4163942	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 121 180
scaffold_6540	Scipio	protein_match	4169659	4169774	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 181 219
scaffold_6540	Scipio	protein_match	4170090	4170258	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 220 275
scaffold_6540	Scipio	protein_match	4170546	4170682	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 276 321
scaffold_6540	Scipio	protein_match	4170743	4170886	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 322 369
scaffold_6540	Scipio	protein_match	4171194	4171316	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 370 410
scaffold_6540	Scipio	protein_match	4172096	4172342	1.0	+	1	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 411 492
scaffold_6540	Scipio	protein_match	4172416	4172610	1.0	+	0	gene_id=kassiopeia_gene_id343229 GI23970 [Drosophila mojavensis];Query=GI23970%20[Drosophila%20mojavensis] 493 557
# protein sequence = [MKLTSQESIKAWILSALMVHGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTN
# LWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGHYEVTLMTKAIVYSNGLVIWQPPAVYKSSCSIDVEYFPYDVQTCILKLGSWTY
# DGFKVDLRHMDEQQGSNIVDVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGE
# KVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHRMAPWVKRLFINFLPKFLFIKRPTYNFETSKLL
# LKDAHACFYPYYSSTNIDRLVNSGYSHTASKEELTTQSLTSTGPFGGSCQVHGPLPQLTHSSSDDLTAVPDLDTGNSGIKSPILNNPAFSHSKCPPRV
# HRSCFCVRFIAEHTKMQEDSTKVKEDWKYVAMVLDRLFLWIFTLAVLAGTAGIILQAPTLYDDRIPIIEQKDLEFSGTSAGRCRPAQ]
#
##gff-version	3
##query	GI23981%20[Drosophila%20mojavensis] 1 168
scaffold_6540	Scipio	protein_match	4283066	4283111	1.0	+	0	gene_id=kassiopeia_gene_id343240 GI23981 [Drosophila mojavensis];Query=GI23981%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	4284116	4284155	1.0	+	0	gene_id=kassiopeia_gene_id343240 GI23981 [Drosophila mojavensis];Query=GI23981%20[Drosophila%20mojavensis] 1 13
scaffold_6540	Scipio	protein_match	4284805	4284907	1.0	+	2	gene_id=kassiopeia_gene_id343240 GI23981 [Drosophila mojavensis];Query=GI23981%20[Drosophila%20mojavensis] 16 50
scaffold_6540	Scipio	protein_match	4286717	4287071	1.0	+	1	gene_id=kassiopeia_gene_id343240 GI23981 [Drosophila mojavensis];Query=GI23981%20[Drosophila%20mojavensis] 51 168
# protein sequence = [MSELQSSLLLKKQLAELNKNPVEGFSAGLIDENDIFRWEVLIIGPPDTLYEGGFFKAHLYFPKEYPLRPPRMKFVTEI
# WHPNIEKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRESYPDFKRKVARCVRKSQEECS]
#
##gff-version	3
##query	GI24019%20[Drosophila%20mojavensis] 1 1270
scaffold_6540	Scipio	protein_match	4788885	4788929	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	4789392	4789730	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 16 128
scaffold_6540	Scipio	protein_match	4798956	4799114	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 129 181
scaffold_6540	Scipio	protein_match	4799274	4799385	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 182 218
scaffold_6540	Scipio	protein_match	4799741	4799892	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 219 269
scaffold_6540	Scipio	protein_match	4800264	4800431	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 270 325
scaffold_6540	Scipio	protein_match	4801913	4802004	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 326 356
scaffold_6540	Scipio	protein_match	4804251	4804342	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 326 356
scaffold_6540	Scipio	protein_match	4807750	4807841	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 326 356
scaffold_6540	Scipio	protein_match	4813165	4813275	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 357 393
scaffold_6540	Scipio	protein_match	4813788	4813893	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 394 428
scaffold_6540	Scipio	protein_match	4815570	4815675	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 394 428
scaffold_6540	Scipio	protein_match	4819015	4819167	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 429 479
scaffold_6540	Scipio	protein_match	4819231	4819386	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 480 531
scaffold_6540	Scipio	protein_match	4819642	4819754	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 532 569
scaffold_6540	Scipio	protein_match	4821444	4821602	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 570 622
scaffold_6540	Scipio	protein_match	4821660	4821736	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 623 647
scaffold_6540	Scipio	protein_match	4822391	4822426	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 648 659
scaffold_6540	Scipio	protein_match	4824616	4824687	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 660 683
scaffold_6540	Scipio	protein_match	4825807	4825856	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 684 700
# gap 701 709
scaffold_6540	Scipio	protein_match	4828205	4828277	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 710 733
scaffold_6540	Scipio	protein_match	4829318	4829350	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 734 744
scaffold_6540	Scipio	protein_match	4829488	4829677	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 745 808
scaffold_6540	Scipio	protein_match	4830393	4830458	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 809 830
scaffold_6540	Scipio	protein_match	4832136	4832313	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 831 889
scaffold_6540	Scipio	protein_match	4832390	4832897	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 890 1058
scaffold_6540	Scipio	protein_match	4833116	4833252	0.993	+	2	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 1059 1104
scaffold_6540	Scipio	protein_match	4833387	4833529	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 1105 1152
scaffold_6540	Scipio	protein_match	4833593	4833812	0.993	+	1	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 1153 1225
scaffold_6540	Scipio	protein_match	4833869	4834003	0.993	+	0	gene_id=kassiopeia_gene_id343277 GI24019 [Drosophila mojavensis];Query=GI24019%20[Drosophila%20mojavensis] 1226 1270
# protein sequence = [MASGLIGTNISELTNGMSGCDQSTVESLADDPTDSPFDADDCLKVRKYWCFLLSSIFTFLAGLLIVLLWRAFAFICCR
# KEPDLGPNDPKQKEQKASRNKQEFEGTFMTEAKDWAGELISGQTTTGRILVVLVFILSIASLIIYFVDASSEEVERCQKWSNNITQQIDLAFNIFFMV
# YFFIRFIAASDKLWFMLEMYSFVDYFTIPPSFVSIYLDRTWIGLRFLRALRLMTVPDILQYLNVLKTSSSIRLAQLVSIFISVWLTAAGIIHLLENSG
# DPLDFNNAHRLSYWTCVYFLIVTMSTVGYGDVYCETVLGRTFLVFFLLVGLAMFASSIPEIIELVGSGNKYGGELKREHGKRHIVVCGHITYESVSHF
# LKDFLHEDREDVDVEVVFLHRKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVKVHEADACLVLANKYCQDPDAEDAANIMRVISIKNYSDDIRVI
# IQLMQYHNKAYLLNIPSWDWKQGDDVICLAELKLGFIAQSCLAPGFSTMMANLFAMRSFKTSPEMQSWTNDYLRGTGMEMYTETLSPTFIGIPFAQAT
# ELCFSKLKLLLLAIEIKGAEEGADSKISINPRGAKIQANTQGFFIAQSADEVKRAWFYCKACHEDIKDETLIKKCKCKNLTVQPRSKFDDLDVGMIMM
# QTGMVNQGITSVMNTMEVATFRKGVRAVQMVGRA.........EHHPAPTFTPPELPKRVHVRGSVSGDITRDREDTNLLNRNVRRPNGTGNGTGGMH
# HMNNTAAAAAAAAAAGKQVNKVKPTVNVSRQVEGQVISPSQYNRPPENDANPYAGYQLAYEVKKLMPTSRSSGTGTQNQNGGVSLPAGIADDQSKDFD
# FEKTEMKYDSTGMFHWSPAKSLEDCILDRNQAAMTVLNGHVVVCLFADPDSPLIGLRNLVMPLRASNFHYHELKHVVIVGSVDYIRREWKMLQNLPKI
# SVLNGSPLSRADLRAVNVNLCDMCCILSAKVPSNDDPTLADKEAILASLNIKAMTFDDTIGVLSQRGPEFDNLSATAGSPIVLQRRGSVYGANVPMIT
# ELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSTTYFNQNALTLIRSLITGGATPELELILAEGAGLRGGYSTIDSLSNRDRCRVG
# QISLYDGPLAQFGECGKYGDLFVAALKSYGMLCIGLYRFRDTSSSCDASSKRYVITNPPDDFSLLPTDQVFVLMQFDPGLEYKPPAVRAPAGGRGTNT
# QGSGVGGGGSNKDDNS]
#
##gff-version	3
##query	GI24063%20[Drosophila%20mojavensis] 1 883
scaffold_6540	Scipio	protein_match	5671948	5672012	1.0	+	0	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 1 22
scaffold_6540	Scipio	protein_match	5672448	5672521	1.0	+	0	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 1 25
scaffold_6540	Scipio	protein_match	5675915	5676237	1.0	+	1	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 23 129
scaffold_6540	Scipio	protein_match	5676331	5676472	1.0	+	2	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 130 177
scaffold_6540	Scipio	protein_match	5679374	5679565	1.0	+	1	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 178 241
scaffold_6540	Scipio	protein_match	5679647	5679932	1.0	+	1	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 242 336
scaffold_6540	Scipio	protein_match	5679998	5680469	1.0	+	0	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 337 493
scaffold_6540	Scipio	protein_match	5680534	5681216	1.0	+	2	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 494 721
scaffold_6540	Scipio	protein_match	5681283	5681768	1.0	+	0	gene_id=kassiopeia_gene_id343321 GI24063 [Drosophila mojavensis];Query=GI24063%20[Drosophila%20mojavensis] 722 883
# protein sequence = [MLRLWASLLLVCAAQASPFYSDFMQHLTRPLPLHRTLFAPIPFAPLAPLEPLHAKPSQRVASVWAAPPPAPLAAQQPR
# PQALANAPLLPLYSNSYGSDSISDTEFVPLEQQGRHDAAAASTQGVEQKPFTVDAITTDVNSPNPAVFFQQSFPFFGNEFFNSFGGFGFGNSQEPWWK
# GPNVCTEKEESDGATTETDGDEAVDSFGQERDGAGSVVRSPLFGQFHFSVNSCAEKPNKHVCTKIVNQNGKKKMVTMTRQCCYGYGRPRNADFTVPCE
# KIEIKDIAATAADMGAQQFIESAKSAGELGNMLSNSQGKKLTLFVPNDAAFQEYRSQHQQENNVDDSKGEGSQMSSILKLHSVQGEVELEDVPNEKLL
# QSELTGQKIRINTYQLPPALGLEPYRYAANCVPIVQHDKLSEQALVHTLNGVLKPLTKNVMDLIRERADMSIMRTVLEKTNISALLEGDKPVTIFVPT
# DAAFDKLEPHLRRALKEGRGCASNILKNHILDLTFCSLATLPGAKTTTYNLLGEPLLLNRTKHVANQTEPSAIYINNAAKILDADIMGTNGVLHVIDT
# ILPTDSALPMTTLLSQKNITIFKRLLEASGLDYQFDDMDNVTVFAPTDKALQHSEWARKLAEQPESLKDNKDLAEFLNYHVIKPMIKTCDLSESLLPT
# VAGSNVRLNLYSTHALFSDVMNRATVNCARLVHFDDESCGSVLHQLDRPLTAPKNNLLQSLEANPNYSKFLELVRKANLTHLLANESDSFTLLVPKND
# VFEEFSESTETKPAQSQAELEAQVKTHIVNDVVCCAGIIPTNWPFVRSIESISGQHLRITRDRRPKIENAGVTKCDLIATNGILHEINDIIVPRSPPA
# QQHRPRPHIYQPPRGDFDVFF]
#
##gff-version	3
##query	GI24101%20[Drosophila%20mojavensis] 1 592
scaffold_6540	Scipio	protein_match	6156399	6156615	1.0	+	0	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 1 72
scaffold_6540	Scipio	protein_match	6156684	6156991	1.0	+	2	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 73 175
scaffold_6540	Scipio	protein_match	6157058	6157611	1.0	+	0	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 176 360
scaffold_6540	Scipio	protein_match	6157673	6157819	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 361 409
scaffold_6540	Scipio	protein_match	6157887	6157997	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 410 446
scaffold_6540	Scipio	protein_match	6158070	6158227	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 447 498
scaffold_6540	Scipio	protein_match	6160390	6160500	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 410 446
scaffold_6540	Scipio	protein_match	6160566	6160723	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 447 498
scaffold_6540	Scipio	protein_match	6163310	6163420	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 410 446
scaffold_6540	Scipio	protein_match	6163489	6163646	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 447 498
scaffold_6540	Scipio	protein_match	6165933	6166043	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 410 446
scaffold_6540	Scipio	protein_match	6166102	6166259	1.0	+	1	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 447 498
scaffold_6540	Scipio	protein_match	6166316	6166596	1.0	+	2	gene_id=kassiopeia_gene_id343359 GI24101 [Drosophila mojavensis];Query=GI24101%20[Drosophila%20mojavensis] 499 592
# protein sequence = [MPCFKQEKSLEFRSRRDTTNDRDPMAPKPVRPRAMRYHGLFGMSIAAQHLIVDEKWTPSCITDLYGNMAELLKRRVIY
# KQHETRTHRALLLVENKRVKTECADGRLKLQKITVGNNAHQIRNFLIMHRDMQRLYQRMPIYLVADNINQRTFVMRKERDRLDARLQQLKHKYRVLLM
# ERSRAVNMIKYENEYILQEELQSRVLLKKIENSKVRLNAIRTINTTYKKMRQVLLQDEIFYEPILRSLDDDMEDQVNFIKHILYLGMPAIAKFKVLNR
# ELLQLSEKARKNQLAKIQILNSLKKPIVIGPPQVVVREIQTNNPKRYLRLTESMAILKAELQTIENTIKNLRLTVLCSQAKEIYPRIKTQMENNEKLK
# REIEKKMQAKLMLEQKLKCSTLLSDVLLNNLSEEEINRLERIRELQLMMKSDNEFEEQSIAHIQNRADAYVLMRFNVWNLYEILRHVDRNPKTFRTTY
# PNSYLKLPLLKFEMLEAFAVPPEVFEVDVEILMNTLKRKVYKLMKGYSDKMLPSLKKSKQEYHEKFLATFEQREAYNEDDQHMTIGGDLLEDTKVNMN
# VPNRKQIKAQSARIVENAIRREES]
#
##gff-version	3
##query	GI24239%20[Drosophila%20mojavensis] 1 301
scaffold_6540	Scipio	protein_match	8509569	8509614	1.0	+	0	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	8512783	8512831	1.0	+	0	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 1 16
scaffold_6540	Scipio	protein_match	8513270	8513423	1.0	+	2	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 16 67
scaffold_6540	Scipio	protein_match	8513488	8513696	1.0	+	1	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 68 136
scaffold_6540	Scipio	protein_match	8513790	8513923	1.0	+	2	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 137 181
scaffold_6540	Scipio	protein_match	8514009	8514261	1.0	+	0	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 182 265
scaffold_6540	Scipio	protein_match	8515438	8515544	1.0	+	2	gene_id=kassiopeia_gene_id343489 GI24239 [Drosophila mojavensis];Query=GI24239%20[Drosophila%20mojavensis] 266 301
# protein sequence = [MDYASLLFLFSCTLIDMQGISALFVTDISVPEIVDFRDNVTLSCSYDMSGHTLNSVKWYKDRLEFFRYSPLMRPVYMT
# FPVAGIQVLDGKYFCNESTCRVDLSLLGAKSTGTYMCEVSGDAPHFKLAAKEDNMTVAALPQSDPLIEGFNSMYRLEEFLSATCSSDYSSVPTKLTWY
# INGEQPMLGELQPFIDTTIPAHDYILRRQRLQVHFYLQGHRFYQVSKILELKCVAEIENYPELRRETTLSASLSHSDNLNNQMLRHPGASSAAADCRC
# CSWPRTSCLICSLFVIILLTQCAQRPS]
#
##gff-version	3
##query	GI24331%20[Drosophila%20mojavensis] 1 1016
scaffold_6540	Scipio	protein_match	10170345	10170354	1.0	+	0	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 1 3
scaffold_6540	Scipio	protein_match	10170431	10170649	1.0	+	2	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 4 76
scaffold_6540	Scipio	protein_match	10170773	10170948	1.0	+	2	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 77 135
scaffold_6540	Scipio	protein_match	10171677	10172047	1.0	+	0	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 136 259
scaffold_6540	Scipio	protein_match	10179175	10179563	1.0	+	0	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 136 265
scaffold_6540	Scipio	protein_match	10179695	10179842	1.0	+	1	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 260 308
scaffold_6540	Scipio	protein_match	10179900	10180421	1.0	+	0	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 309 482
scaffold_6540	Scipio	protein_match	10180484	10180776	1.0	+	0	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 483 580
scaffold_6540	Scipio	protein_match	10180851	10180994	1.0	+	1	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 581 628
scaffold_6540	Scipio	protein_match	10181057	10181548	1.0	+	1	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 629 792
scaffold_6540	Scipio	protein_match	10181615	10182287	1.0	+	1	gene_id=kassiopeia_gene_id343580 GI24331 [Drosophila mojavensis];Query=GI24331%20[Drosophila%20mojavensis] 793 1016
# protein sequence = [MVAWLTVKAVAICLGITTVAFCVATIVLAVENASLEDDLQDALAKLDVLLADTTTIGPTSSGTTPTSPGGETSPGGGG
# TTPGGGTTPGGGTTPGGGTTPGGGTTPGGGTTPGGSSTANPSPIYPTLPTGLPNPEEIVYRLPSEIRPIRYRVYINPDLKTGACDGTVSIQFQLDAVT
# NLIVLHAKDLNVHGISILNMMARMRIAIKTYYVDDTRELLIIELKEVLSVNKAYTLSASFDCKLDNLIGSYRSSYVDEEGNERHIISTKFEPTYARRA
# FPCFDEPHLKAQFVITVARPSGNEYHVLSNMPVASEHNEGDLTEVTFEETVPMSTYLAAFVVSDFAHISKKIGGTNIDISVFAPKAQISKAQYALDTG
# AGVIEYYIDMFNISYPLPKLDMVAIPDFVSGAMENWGLVTYRETALLYDEKTSSSANKQRVATVVAHELAHQWFGNLVTMKWWNDLWLNEGFASFIEY
# KGVQYMHADWDMLNQFVIDELHPVLRIDSTLASHPIVKTIESPAEITEYFDTITYSKGASLVRMLENLVTEEKLKNATTRYLNRHIYSTATTEDYLTA
# VEEEEGLDFDVKQIMQTWTEQMGLPVVEVVKDGNNYRLKQKRFLANQDDYNVEVEPSSFNYRWSIPITYITSADSTPKTTIFNYNDNQLVISVPSTVS
# WVKFNKDQVGYYRVNYAEEQWKTLLEALKNSREDFSTADRAHLLNDANALADAAQLDYTIALDLSTYLEEEKDYVPWSVGTASLTSLRNRVYYTSLYK
# NFTTYARKLLSPIVEKLTFTVGTDHLENKLRNKVLNAACGVGHESSLQQAATLFQQWLTNPDTRPNPDVRDVVYFYGLQEVNTEAAWDQVWELYLSEP
# DAQEKVKLMSALTAIKVPWLLHRYINLAWDEKNVRRQDYFSLLGQISANPVGQSLVWDYVRENWEQLVERYGINERTLGNLIPTITGRFATQTKLEEM
# QQFFAKYPEAGAGTAARQRALETVKANIKWLELNQSQVGKWLANYVQQAAVSNRIN]
#
##gff-version	3
##query	GI24528%20[Drosophila%20mojavensis] 1 142
scaffold_6540	Scipio	protein_match	13489925	13490022	1.0	+	0	gene_id=kassiopeia_gene_id343773 GI24528 [Drosophila mojavensis];Query=GI24528%20[Drosophila%20mojavensis] 1 33
scaffold_6540	Scipio	protein_match	13496494	13496697	1.0	+	1	gene_id=kassiopeia_gene_id343773 GI24528 [Drosophila mojavensis];Query=GI24528%20[Drosophila%20mojavensis] 34 101
scaffold_6540	Scipio	protein_match	13499172	13499426	1.0	+	1	gene_id=kassiopeia_gene_id343773 GI24528 [Drosophila mojavensis];Query=GI24528%20[Drosophila%20mojavensis] 34 118
scaffold_6540	Scipio	protein_match	13499945	13500068	1.0	+	1	gene_id=kassiopeia_gene_id343773 GI24528 [Drosophila mojavensis];Query=GI24528%20[Drosophila%20mojavensis] 102 142
# protein sequence = [MTMTRTTMDTNSSFSTNSSSSTNFKHKFGFASKSKLTNSQTTSQTDSQPDSQTVSQPAKLGSQQQEEQQHETSQQQPQ
# QQQHRQQQQQQKQQQKQQQQHGSISRYSANERDQLCKQQQQQQQQQQQLQQKLQQLQQQQLHEQ]
#
##gff-version	3
##query	GI24774%20[Drosophila%20mojavensis] 1 66
scaffold_6540	Scipio	protein_match	17589486	17589565	1.0	+	0	gene_id=kassiopeia_gene_id344012 GI24774 [Drosophila mojavensis];Query=GI24774%20[Drosophila%20mojavensis] 1 27
scaffold_6540	Scipio	protein_match	17609139	17609236	1.0	+	0	gene_id=kassiopeia_gene_id344012 GI24774 [Drosophila mojavensis];Query=GI24774%20[Drosophila%20mojavensis] 1 33
scaffold_6540	Scipio	protein_match	17611629	17611746	1.0	+	1	gene_id=kassiopeia_gene_id344012 GI24774 [Drosophila mojavensis];Query=GI24774%20[Drosophila%20mojavensis] 28 66
# protein sequence = [MSANVDGSTLAALVEVVLVVLAVLLGLSLLLAPRKEVEMKAGLGLSLTLSLSLGLALGMGMGAEEN]
#
##gff-version	3
##query	GI24800%20[Drosophila%20mojavensis] 1 754
scaffold_6540	Scipio	protein_match	17977133	17977191	1.0	+	0	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 1 20
scaffold_6540	Scipio	protein_match	17978110	17978171	1.0	+	0	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 1 21
scaffold_6540	Scipio	protein_match	17979360	17980809	1.0	+	1	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 21 503
scaffold_6540	Scipio	protein_match	17980897	17981155	1.0	+	0	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 504 589
scaffold_6540	Scipio	protein_match	17987796	17988076	1.0	+	2	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 590 683
scaffold_6540	Scipio	protein_match	17988150	17988362	1.0	+	0	gene_id=kassiopeia_gene_id344038 GI24800 [Drosophila mojavensis];Query=GI24800%20[Drosophila%20mojavensis] 684 754
# protein sequence = [MKKVKKKKLKQLQSQRNEQNAQVNSSSVVKCPETSAASDMVMLQSPVQKPSDSIGAQPTAVGGLMSPNSNPDSPKSNT
# SPDLANVGSNVGAELVSVSSTATSASTSISAPVAKLPKFIIAASGQAAKQEQDLRYSIERLKQMSSESAGMLSRLTPTQEDADKEKTNNNNNNNNNNN
# LANNNKSNVRRSQSPPASGVGVGVFPLPAQQRKLLELSAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAAQHHHHQQQQQQQHMHHHHHHSAHS
# HPHHAAAAVFHLRAPAAIANASNTTAPPSPATSPLSPPTSPSTGSGTGASTGAGSGSCQTTHSEPQRDSPPGTTAAPANPSHPALAAPPQHQQLPQPQ
# PPPPQAMQLHLGAGPHPVMGSISPTSANEMDLERIKLVAAVAARSSQSQAPSTSTAASTSSASVSPPGRDLSDYGFRIQLGGLAAAAAAAAATSRQIA
# AANYARSDTSEELNVDGNDEESNDGSGSHSTPSVCPVDLTRSVPNGANSASTASTSGASDREATKRLAFSVENILDPNKFTGSKLPATAPPFGHPRQW
# SYDRDEDMHDHLDDEHSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGSGGGGGGSKPRRARTAFTYEQLVSLENKFKTTRYLS
# VCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSPTLPPPTGGSFGPGAYASSLLYPHAVPYPPYGPYFHPLGAHQLSHSHS]
#
##gff-version	3
##query	GI24830%20[Drosophila%20mojavensis] 1 345
scaffold_6540	Scipio	protein_match	18665642	18666157	1.0	+	0	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 1 172
scaffold_6540	Scipio	protein_match	18667834	18667956	1.0	+	0	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 173 213
scaffold_6540	Scipio	protein_match	18668030	18668104	1.0	+	0	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 214 238
scaffold_6540	Scipio	protein_match	18668480	18668570	1.0	+	0	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 239 268
scaffold_6540	Scipio	protein_match	18672587	18672665	1.0	+	0	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 239 264
scaffold_6540	Scipio	protein_match	18672736	18672977	1.0	+	2	gene_id=kassiopeia_gene_id344067 GI24830 [Drosophila mojavensis];Query=GI24830%20[Drosophila%20mojavensis] 265 345
# protein sequence = [MTKYNNANGMLTGAIATNDNAIKQEYNGYLQQTNSTGFRYNNNNSNNDDNINHLSHGNMHQNPHQTLQHFFSRFNAVG
# DASSAACSFGNRNHPSTEGSKQLSMTSSPIYTTDYDDEDSSLSSEEHVLAPLVCASAQSSRPCLTWACKACKKKNVTVDRRKAATMRERRRLRKVNEA
# FEILKRRTSSNPNQRLPKVEILRNAIEYIESLEDLLQESTPTRDGDNLAPSLSGKSCQSDYLSSYAGAYLEDKLIFYNKHMEKYGQFTDFDSSASANG
# SSLDCLNLIVQSINKSTTNAAQMTATASKVTTVVTTNSASSTSTTNTTTTTATGKRSTSSLNANFKQKCST]
#
##gff-version	3
##query	GI10131%20[Drosophila%20mojavensis] 1 361
scaffold_6540	Scipio	protein_match	21805636	21806431	1.0	+	0	gene_id=kassiopeia_gene_id329755 GI10131 [Drosophila mojavensis];Query=GI10131%20[Drosophila%20mojavensis] 1 265
scaffold_6540	Scipio	protein_match	21806492	21806691	1.0	+	2	gene_id=kassiopeia_gene_id329755 GI10131 [Drosophila mojavensis];Query=GI10131%20[Drosophila%20mojavensis] 266 332
scaffold_6540	Scipio	protein_match	21806840	21806932	1.0	+	0	gene_id=kassiopeia_gene_id329755 GI10131 [Drosophila mojavensis];Query=GI10131%20[Drosophila%20mojavensis] 333 363
scaffold_6540	Scipio	protein_match	21807615	21807707	1.0	+	0	gene_id=kassiopeia_gene_id329755 GI10131 [Drosophila mojavensis];Query=GI10131%20[Drosophila%20mojavensis] 333 363
scaffold_6540	Scipio	protein_match	21808980	21809066	1.0	+	0	gene_id=kassiopeia_gene_id329755 GI10131 [Drosophila mojavensis];Query=GI10131%20[Drosophila%20mojavensis] 333 361
# protein sequence = [MTTYFNYPSKELQDELRSIAQKIVAPGKGILAADESVSTMGKRLKDIGVENTDENRRAYRQLLFTTDDKLAENISGVI
# LFDETVYQKADDGTPFVQLLKKKGIIPGIKVDTGVVNLMGSEDETTTQGLDDLAKRCAKYKKEGCDFAKWRCVLKIGKNTPSYQAILENANVLARYAS
# ICQSERIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALNDHHVYLEGTLLKPNMVTAGQGAKKNTPEEIALATVTALSRTVPAAVPGITFLSGGQ
# SEEEASVNLSAINNAPAPRPWKLTFSYGRALQASVLRAWGGKKENIAAGQQELINRAKANGDASLGKYVAGSAGSGSGSLFIANHAY]
#
##gff-version	3
##query	GI10148%20[Drosophila%20mojavensis] 1 923
scaffold_6540	Scipio	protein_match	22050969	22051049	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 1 27
scaffold_6540	Scipio	protein_match	22052152	22052264	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 28 65
scaffold_6540	Scipio	protein_match	22064904	22065429	1.0	+	1	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 66 240
scaffold_6540	Scipio	protein_match	22065493	22066044	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 241 424
scaffold_6540	Scipio	protein_match	22066560	22066730	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 425 481
scaffold_6540	Scipio	protein_match	22066971	22067056	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 482 510
scaffold_6540	Scipio	protein_match	22067370	22067467	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 482 514
scaffold_6540	Scipio	protein_match	22068366	22068451	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 482 510
scaffold_6540	Scipio	protein_match	22068731	22068779	1.0	+	1	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 511 526
scaffold_6540	Scipio	protein_match	22069038	22069214	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 527 585
scaffold_6540	Scipio	protein_match	22069281	22069712	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 586 729
scaffold_6540	Scipio	protein_match	22069819	22070313	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 730 894
scaffold_6540	Scipio	protein_match	22070768	22070854	1.0	+	0	gene_id=kassiopeia_gene_id329772 GI10148 [Drosophila mojavensis];Query=GI10148%20[Drosophila%20mojavensis] 895 923
# protein sequence = [MRSRAVGFKLDVEACKPLKPQSQLPTDTPSTSLRESIEEFTTIPNVKPSSMGSSRSKPAVTNGMPDTNAAEPTVPLAE
# FVVPPNSDLEEPIVPLAQPPKMNETPAATPAATPTAAATPTTEATTTTTATPSAGNDSAAVAKPSSSNEDSIFSVIYSVGKKVAIVGSIYLVGYMGWS
# VAWLIAPVILSVARDQLAKTSAKRRDIAKASALACEKDVILARIDELPAWVYFPDVERAEWLNKILKQVWPNANHFARTLVKETIEPNVALALSQYKM
# NGFRFDRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLFYASDCDINFYLAGMKGGIKDFQIHGWVRVVMKPLIRSMPLVGGLQIFFLNNPNIDFNLV
# GVIDFMDMPGLSDLLRRIIVEQIGNVMVLPNKLPISLSDEVSAVSLKMPEPEGLLRIHVVEAKNLMKKDISVLGKGKSDPYAIVNVGAQEFRTQIIDN
# NVNPKWDYWCEATVFIEMGQFVNIQLKDSDDSKQDENLGRATIDISSVIKKGVLDTWLALEDAKHGDLHVRLQWYKLTADPNDLQQILLETQLLRVTT
# MSSAVLSVFIDSARHLKQARANSKPDPYLVCSVNKQKKQTAMILRDDSPVWEQGFTFLVTNPNNESLNIKIYDQKTGNDIGQFTYTLSTLLKQFNMEV
# IQQPFQLQKSGPESRLYMSLSLRILKAGEIDDESEALEQIAAMQRSTSVKTPDPPALTSQASKDEQAKAKRLSAETPISEEEPIKSTTIIPASASLEK
# AISEVASSTLTHRMPDTTSTSGEHGLGRIQLSITYSAQRQKLDVTIHKIMNIPLRDPSSIPDPYVKLYLLPGRSKESKRKTSVIKDNCNPVYDASFEY
# LISIAELRHTELEVTVCTQKGFLSSGSPIIGMLKIPLDDSEITTPAGLKSWFDLQPEQKHE]
#
##gff-version	3
##query	GI10159%20[Drosophila%20mojavensis] 1 229
scaffold_6540	Scipio	protein_match	22216855	22216998	1.0	+	0	gene_id=kassiopeia_gene_id329783 GI10159 [Drosophila mojavensis];Query=GI10159%20[Drosophila%20mojavensis] 1 48
scaffold_6540	Scipio	protein_match	22217065	22217568	1.0	+	0	gene_id=kassiopeia_gene_id329783 GI10159 [Drosophila mojavensis];Query=GI10159%20[Drosophila%20mojavensis] 49 216
scaffold_6540	Scipio	protein_match	22218682	22219224	1.0	+	0	gene_id=kassiopeia_gene_id329783 GI10159 [Drosophila mojavensis];Query=GI10159%20[Drosophila%20mojavensis] 49 229
# protein sequence = [MKTNIIGLWLLTLSWLQCVQSQLPNLPELPANVNCLTELKRDPIDLTAMSGYWYEAARIPNMDIMKCLNVSVPPTADG
# KLKLRLEYISTIHGEIHAVKETVSFPWNNFTKTSVFQLHYKTVKMNVTVTYKVLYSDPQLMIVLCGYSTISPFPLFKLLTRQRRLDQNLIDIIKADAD
# RMGIGSQIIWTEQSPDQCSAANRLATKIIIIFSLISLLNLFNWNYRIKFRVMF]
#
##gff-version	3
##query	GI10160%20[Drosophila%20mojavensis] 1 109
scaffold_6540	Scipio	protein_match	22359613	22359658	1.0	+	0	gene_id=kassiopeia_gene_id329784 GI10160 [Drosophila mojavensis];Query=GI10160%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	22361769	22361808	1.0	+	0	gene_id=kassiopeia_gene_id329784 GI10160 [Drosophila mojavensis];Query=GI10160%20[Drosophila%20mojavensis] 1 13
scaffold_6540	Scipio	protein_match	22362836	22363116	1.0	+	2	gene_id=kassiopeia_gene_id329784 GI10160 [Drosophila mojavensis];Query=GI10160%20[Drosophila%20mojavensis] 16 109
# protein sequence = [MRLSTRKTEMKRERETSNKQRLPQQQQQQRQQQSGGSRCISLLARLMTGYPQKMQKLVTVHDPRLPANSSSRSSYAKV
# QAGAAAAGAGAEFLSQLPISGDAVEAEASNV]
#
##gff-version	3
##query	GI10216%20[Drosophila%20mojavensis] 1 605
scaffold_6540	Scipio	protein_match	23048115	23048198	1.0	+	0	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 1 28
scaffold_6540	Scipio	protein_match	23048443	23048526	1.0	+	0	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 1 28
scaffold_6540	Scipio	protein_match	23055738	23056148	1.0	+	0	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 29 165
scaffold_6540	Scipio	protein_match	23060342	23060472	1.0	+	0	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 166 209
scaffold_6540	Scipio	protein_match	23060541	23061284	1.0	+	1	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 210 457
scaffold_6540	Scipio	protein_match	23061348	23061529	1.0	+	1	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 458 517
scaffold_6540	Scipio	protein_match	23061604	23061866	1.0	+	2	gene_id=kassiopeia_gene_id329840 GI10216 [Drosophila mojavensis];Query=GI10216%20[Drosophila%20mojavensis] 518 605
# protein sequence = [MKLYAAATVALFLLAAIQTTPTAAEEQETQTQTESTDEAISEPPIKLVHVLNPGEREYLSPNLIGVQNIAMSFLPLSM
# NFVNIIDAFREIVNGVRYEILLNAVDTKANDADTICRLVILEKPWLTTQWGDKHRELVNTNCSDVADNALTFEADREERAKALNEKYVSRKRRGLNDV
# PLGGSKPFDEKQAEEQLQQTLDKLTAGDGPHYKIVKVYTASRQLVSGTLTRIDADLIDGNDEQRRCIVEIWAQPWLEQGHKITFKCHNQPAVHARHSR
# SVEWAEKKTHKKHNHHSLNKVDHLFHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQELNDNEQGSAKYGITEFADMTSSEYTQRAGLWQRSANKPTG
# GKPAVVPAYKGELPKEFDWREKNAVTQVKNQGSCGSCWAFSVTGNIEGLYAIKTGELREFSEQELLDCDSTDSACNGGLMDNAYKAIKDIGGLEYESE
# YPYLAKKKQCHFNKTLSHVQVADFVDLPKGNETAMQEWLLANGPISIGLNANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDYPNFHKTLPYW
# IVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVLA]
#
##gff-version	3
##query	GI10332%20[Drosophila%20mojavensis] 1 769
scaffold_6540	Scipio	protein_match	25297792	25298659	1.0	+	0	gene_id=kassiopeia_gene_id329952 GI10332 [Drosophila mojavensis];Query=GI10332%20[Drosophila%20mojavensis] 1 289
scaffold_6540	Scipio	protein_match	25325323	25325414	1.0	+	2	gene_id=kassiopeia_gene_id329952 GI10332 [Drosophila mojavensis];Query=GI10332%20[Drosophila%20mojavensis] 290 320
scaffold_6540	Scipio	protein_match	25335610	25335713	1.0	+	2	gene_id=kassiopeia_gene_id329952 GI10332 [Drosophila mojavensis];Query=GI10332%20[Drosophila%20mojavensis] 290 324
scaffold_6540	Scipio	protein_match	25339926	25341260	1.0	+	0	gene_id=kassiopeia_gene_id329952 GI10332 [Drosophila mojavensis];Query=GI10332%20[Drosophila%20mojavensis] 325 769
# protein sequence = [MRRNLRLNWRALALLGALLLSIETRAGLSFAVTTMSSQDTNSTQTNSSNANNNNNNNNNSSSNNNNQYNSNSSMQSDH
# SHNSPLFLLRREYSLDQNQSISAEFNMRTLNNTNQSTAISPTTTATPNSSSSRSITTEATVADADRLGFIFSSAPHEHLAILSRTERSIRHQHQHLHH
# QQLHQRQQQQQQQQPTAATNSNSNNNSNFIGSKSKRLNNSRNNLHINSSNNNNSHSNSNIFNNNPSNLDRNERSTISHLAGPSRKIQLYMKNRILQIL
# PDGTVNGTQDEQSEYTILQRSTVDVGRIKIQSVATCLYLCMDACGAAYASKEFDDNCVFNENMELHNYNTYSSTYNSNARRVFYLALTGQGAPRRTQI
# PATRTLGKLSTYTNAITETVPQQRVEQLIAKNFGANRVKHGVRQLCDTGKPLIELIDALHFKPRPKCSSSSSSNSRSSSSSRSSSSSSSSNSISSSSS
# SNVPVPAYSASSLISISNGSQSDSGHISSSITSNNNNNINSSSSSSSSSSSSNSSNLSSNITQHKRKKKLRKCRPHEQEQTHNCQRRGTLQRGPKAQL
# CKDLRDEAARTGAPPPKCGKKSGSPAAKRKAAAASASGVVAKGVMQRPRPGGASGKRKAPKQRPNAPKRQRPGNASKRNSTRKLQRLLDPSSTTVRTT
# TTTSTTVASSLATPGYSNSWESSSSLPALALSETSDRVERNVRMSHASVEEPQSEDDAEEEDDDLPELDSQEEPESSYENATLEGQARGSAVDDSVYY
# DQLDL]
#
##gff-version	3
##query	GI10346%20[Drosophila%20mojavensis] 1 1017
scaffold_6540	Scipio	protein_match	25604301	25604673	1.0	+	0	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 1 124
scaffold_6540	Scipio	protein_match	25609453	25609593	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 125 171
scaffold_6540	Scipio	protein_match	25615775	25615894	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 172 211
scaffold_6540	Scipio	protein_match	25615962	25616078	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 212 250
scaffold_6540	Scipio	protein_match	25616720	25616842	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 212 252
scaffold_6540	Scipio	protein_match	25618183	25618409	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 253 328
scaffold_6540	Scipio	protein_match	25619065	25620465	1.0	+	0	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 329 795
scaffold_6540	Scipio	protein_match	25620535	25620733	1.0	+	0	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 796 861
scaffold_6540	Scipio	protein_match	25620841	25620984	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 862 909
scaffold_6540	Scipio	protein_match	25622783	25622916	1.0	+	2	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 910 954
scaffold_6540	Scipio	protein_match	25623316	25623474	1.0	+	0	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 955 1007
scaffold_6540	Scipio	protein_match	25623571	25623600	1.0	+	0	gene_id=kassiopeia_gene_id329966 GI10346 [Drosophila mojavensis];Query=GI10346%20[Drosophila%20mojavensis] 1008 1017
# protein sequence = [MAIELRSTTTLSDIITTAKATTATTTSGDSNNNNNGSNNFNHLQQLFACICANANLVLFTLMLALGKCCTATPTNAAN
# LTHMEQQVLPPTDGATLIKHLDGKSILSMGFKFLNVSGKIGTPLGIAQSLHTKCDEKQFECNNGACIPIRFVCDGDADCADHSDEQVNECKFREATCS
# SDHFRCTNGNCIPNKWRCDQENDCSDGSDEDSTLCKARTCSPDEYSCKSGVGECVPLAWMCDQSKDCSDGSDEHNCNQTCRSDEFTCGNGRCIQRRWV
# CDHDNDCGDGTDERDCPVVPCDSVAEHTCPNGACIAKRWVCDGDPDCPDASDERSCANATKLVTPCLPHEYQCKDRITCLHHSWLCDGDRDCPDGDDE
# HASSCKNVTCRPDQFQCGDRSCIAGHLTCNGQTDCADGSDERDCKLAAPVKSCNATSQFDCGGGQCIPLSKVCDKRKDCPDGEDEPAKKCGQNECAVK
# NGGCMHRCVDHQVGYKCDCHEGYKLSGDGHSCVDVNECEQPGVCSQICVNEIGGFKCECEAGYMRDPRNHTRCKASEGHASLLLARRHDIRKIALDHM
# EMTSIVNNTKSATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLKKSSVTSDGLAVDWIYNHVYYTDTHKCTIELTNFDGNMGKVLIEDALDI
# PRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNIISSANYDGSQRRQILYSTEYLRHPFSITTFED
# YIYWTDWDKQTVFKANKFTGEDVEPITAVHMLQHPMVIHVYHPYRQPDGINHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMSDGLMCVEDP
# NYQAVTQPPRIHRFKAKTKSHQRLVKLNNTNILTETNQPKPLSNKVHVAERSPVNNQTHIDQTTAPSPQPDSGFIALVVIASLSGCAVLLSVVLLLGY
# RYCSKRRINSMNFENPIYRKTTTEDHFSLRKNLPARIYDHTSVMDEEYSPVIGISSY]
#
##gff-version	3
##query	GI10412%20[Drosophila%20mojavensis] 1 797
scaffold_6540	Scipio	protein_match	26809249	26809564	1.0	+	0	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 1 105
scaffold_6540	Scipio	protein_match	26811127	26811330	1.0	+	2	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 106 173
scaffold_6540	Scipio	protein_match	26815056	26815489	1.0	+	2	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 174 318
scaffold_6540	Scipio	protein_match	26815552	26815802	1.0	+	0	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 319 402
scaffold_6540	Scipio	protein_match	26815867	26816302	1.0	+	1	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 403 547
scaffold_6540	Scipio	protein_match	26817085	26817188	1.0	+	0	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 548 582
scaffold_6540	Scipio	protein_match	26818968	26819065	1.0	+	0	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 548 580
scaffold_6540	Scipio	protein_match	26819851	26820502	1.0	+	1	gene_id=kassiopeia_gene_id330031 GI10412 [Drosophila mojavensis];Query=GI10412%20[Drosophila%20mojavensis] 581 797
# protein sequence = [MSTDDLLVRHEKSDDSTSTSTSPPTPTPTPVPSSSLSRLRNTFRRTESISNHIINQISTQFSNAAAAAAASEIIDGTT
# TYPEMPQTVATVSNTPTASAQPKRKKPGQRNSKRFSGLSTGSAGGFEDNGIMAIENLIGRRLCDVVGSNALATAPQQHHKNVGLIGGTLAEWSHLSRD
# TAEIERSNLVNICKLVVKELLEQSLRYGRMLDSDHLPLQHFFIVIEHVLGHGLRPKKGLLGPRKELWDLLQSVENYCPEAQDITASVRDLPTVRTHIG
# RARAWLRIALMQKKLSDYLQALIEHREDSLFEYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKEEDLDSQQGVIDFSLYLRSSSRNAEVNEDSNAP
# VAQLDDAGQGNMIAVLDQKNYIEELNRHLNATVGNLQAKVESLTTTNALMKEDLAIARNSLLALQAENQAMRQSASQQAALNQSDNSSTGSGSDKDKD
# KEKDKVDGLSTQLAEERKRCTELEKELNLQISLKAESDMAMKLLEKDIHEKQDTIVSLRRQLDDIKQINLEMYRKLQDCNASLTHKTELMSKLECQKE
# DMASTIEQLEKKWTNDKSNLGEILKTTSQTLSTQVSACEERAARAEAETRIEREWRVSLQEKELKLKEKISTMQMCVKELNEERQKNEKLKLDLEKVR
# AQWSEAQTTLEELGIQLSVSKLKISEFQDNERRQLRQQQQLLSGSSQSLQQTLPENPVSSPGIWAPDSIATHCTACTREFNLTRRKHHCRSCGEIFCK
# TCSEHTLPLLNAQGQPGRPVRVCNACYAATSGK]
#
##gff-version	3
##query	GI10594%20[Drosophila%20mojavensis] 1 721
scaffold_6540	Scipio	protein_match	29687360	29687525	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 1 55
scaffold_6540	Scipio	protein_match	29688952	29689070	1.0	+	2	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 56 95
scaffold_6540	Scipio	protein_match	29689141	29689462	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 96 202
scaffold_6540	Scipio	protein_match	29689534	29689775	1.0	+	2	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 203 283
scaffold_6540	Scipio	protein_match	29690977	29691112	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 284 328
scaffold_6540	Scipio	protein_match	29692367	29692502	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 284 328
scaffold_6540	Scipio	protein_match	29694297	29694430	1.0	+	2	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 329 373
scaffold_6540	Scipio	protein_match	29694494	29694622	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 374 416
scaffold_6540	Scipio	protein_match	29694682	29694822	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 417 463
scaffold_6540	Scipio	protein_match	29694901	29695007	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 464 499
scaffold_6540	Scipio	protein_match	29695484	29695581	1.0	+	1	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 500 531
scaffold_6540	Scipio	protein_match	29697023	29697294	1.0	+	2	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 532 622
scaffold_6540	Scipio	protein_match	29699279	29699540	1.0	+	0	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 623 709
scaffold_6540	Scipio	protein_match	29701430	29701464	1.0	+	2	gene_id=kassiopeia_gene_id330209 GI10594 [Drosophila mojavensis];Query=GI10594%20[Drosophila%20mojavensis] 710 721
# protein sequence = [MLVNVTQRVAAGTSVILGGRKSNGNGNGTAAAVAAAAATATTNKSYEIKSQTRASKMAEGNGELLDDINQKADDRGDG
# ERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELDERALDALKEFPVDGALNVLSQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVPATAST
# IQVKGPDEEKIKKILERTGYTLDVTTGQRKYGGPPPNWEGNVPGNGCEVFCGKIPKDMFEDELIPLFENCGTIWDLRLMMDPMTGTNRGYAFVTFTNR
# EAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPDDKKKNRGFCFLEYDSHKAASLAKRRLGTGRI
# KVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVTEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNGKEVGASNIEVSLAKPP
# SDKKKKEEILRARERRMMQMMQARPGIVGNLSPTHPSMMSITPVRLPGARMPLRTPMPREYDYDYDYFGYSEFRPGFGADTYYDDVYRAYEGEYSYYD
# YPNAASGNGAAGGGINGGAVAMSNNSGGGSIPLSPSQRSSRSQQGGSANSPVIMGAGRGHGITVPRGRAVGQRGSISRLGAQPVPQAAAAVAAVGQAA
# AAAHRGAATVQGAPAATGGVRGVAPMRPSAPGTQHVKPLQNLPAGSALKTFMEGN]
#
##gff-version	3
##query	GI10754%20[Drosophila%20mojavensis] 1 298
scaffold_6540	Scipio	protein_match	32565304	32565349	1.0	+	0	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	32565393	32565438	1.0	+	0	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 1 15
scaffold_6540	Scipio	protein_match	32565937	32566049	1.0	+	2	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 16 53
scaffold_6540	Scipio	protein_match	32566097	32566337	1.0	+	0	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 54 133
scaffold_6540	Scipio	protein_match	32566401	32566515	1.0	+	2	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 134 172
scaffold_6540	Scipio	protein_match	32566573	32566951	1.0	+	1	gene_id=kassiopeia_gene_id330369 GI10754 [Drosophila mojavensis];Query=GI10754%20[Drosophila%20mojavensis] 173 298
# protein sequence = [MKWENYCDFVAGCVGGACGVLVAHPLDTIKTWQQASNTSVVTAIHQIYKRNNGINGYYRGMLFPLMSTGAINSILFGI
# YGNHLRQLRRVCHSDYQREQLEYHNMFLAGSVAGFVQSFIACPMELIKVRLQTHCYYNDYLYGQRRTAFGTFKRIVKNDGISGLYRGLLPMMCRDVLP
# YGIYMLVYRHASRYMENSEFVRKHRKASNAININLLITTFAGAWAGVLSWVCVIPFDVVKTIMQADENHKFRGIMHCVQVNYRAYGWRSIFRGSWMLL
# ARAIPFNAATFLGYEYSLELCHNY]
#
##gff-version	3
##query	GI10755%20[Drosophila%20mojavensis] 1 1039
scaffold_6540	Scipio	protein_match	32567378	32567401	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 1 8
scaffold_6540	Scipio	protein_match	32585467	32585541	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 9 33
scaffold_6540	Scipio	protein_match	32587330	32587461	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 34 77
scaffold_6540	Scipio	protein_match	32587533	32587799	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 78 166
scaffold_6540	Scipio	protein_match	32587868	32589649	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 167 760
scaffold_6540	Scipio	protein_match	32589753	32589968	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 761 832
scaffold_6540	Scipio	protein_match	32590174	32590268	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 833 864
scaffold_6540	Scipio	protein_match	32590545	32590639	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 833 864
scaffold_6540	Scipio	protein_match	32592324	32592418	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 833 864
scaffold_6540	Scipio	protein_match	32594912	32595006	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 833 864
scaffold_6540	Scipio	protein_match	32597746	32597920	1.0	+	1	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 865 922
scaffold_6540	Scipio	protein_match	32598266	32598498	1.0	+	0	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 923 1000
scaffold_6540	Scipio	protein_match	32598572	32598689	1.0	+	1	gene_id=kassiopeia_gene_id330370 GI10755 [Drosophila mojavensis];Query=GI10755%20[Drosophila%20mojavensis] 1001 1039
# protein sequence = [MALRSDYERADSYRVATVIATDDDNRTADGHFKSRRKMPTKAAKKENLDDLKQELDIDHHKISPEEMYQRFQTHPENG
# LSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQATTSEEPSDDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMES
# FKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGSEFTHENPLETKNLAFFSTNAVEGTAKGVV
# ISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNC
# LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEA
# ALLKCMELALGDVMNIRKRNRKIAEVPFNSTNKYQVSIHETEDPNDPRVLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERV
# LGFCDFMLPSDKYPTGYKYNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETIEDIAQRLNI
# PISEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM
# ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVN
# SRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSI
# FHQGMRNWALNFGLVFETVLAAFLSYCPGMDKGLRMYPLKLVWWFPAIPFMLAIFVYDETRRFYLRRNPGGWLEQETYY]
#
##gff-version	3
##query	GI10860%20[Drosophila%20mojavensis] 1 151
scaffold_6540	Scipio	protein_match	34099746	34099751	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 1 2
scaffold_6540	Scipio	protein_match	34117983	34118036	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 3 20
scaffold_6540	Scipio	protein_match	34118137	34118190	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 21 38
scaffold_6540	Scipio	protein_match	34118291	34118344	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 39 56
scaffold_6540	Scipio	protein_match	34118445	34118498	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 57 74
scaffold_6540	Scipio	protein_match	34119214	34119267	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 57 74
scaffold_6540	Scipio	protein_match	34120213	34120443	1.0	+	0	gene_id=kassiopeia_gene_id330473 GI10860 [Drosophila mojavensis];Query=GI10860%20[Drosophila%20mojavensis] 75 151
# protein sequence = [MKGQIGAPLVILVEFLAVLQGQIEASSIILVEFLAVLQGQIGTPLVILVEFLAVLQGQIGTPLVILVEFLAVLQQQQQ
# QQQEQQQPRKQQQQQQQQQQQQQEQQQPRKQQQQQQQQQQQQQEQQQPRKQQQQQQQQQEQQQQRLQQHQQQE]
#
##gff-version	3
##query	GI14157%20[Drosophila%20mojavensis] 1 141
scaffold_6541	Scipio	protein_match	2542954	2543083	1.0	-	0	gene_id=kassiopeia_gene_id333700 GI14157 [Drosophila mojavensis];Query=GI14157%20[Drosophila%20mojavensis] 1 43
scaffold_6541	Scipio	protein_match	2542733	2542862	1.0	-	0	gene_id=kassiopeia_gene_id333700 GI14157 [Drosophila mojavensis];Query=GI14157%20[Drosophila%20mojavensis] 1 43
scaffold_6541	Scipio	protein_match	2542488	2542724	1.0	-	2	gene_id=kassiopeia_gene_id333700 GI14157 [Drosophila mojavensis];Query=GI14157%20[Drosophila%20mojavensis] 44 122
scaffold_6541	Scipio	protein_match	2537516	2537571	1.0	-	2	gene_id=kassiopeia_gene_id333700 GI14157 [Drosophila mojavensis];Query=GI14157%20[Drosophila%20mojavensis] 123 141
# protein sequence = [MPESDVRSRVHPNLTVAWRELHNPALSVICQSRIGNDGQCGYPCGLLCRRLWVLPPLISEQRSHAEGPERFTLESQGV
# KLLNTERLTTARREPHDPTLSVVRQGWTGAATPVAVDEIEVVARWNLVETTFEVEDREEFNVP]
#
##gff-version	3
##query	GI16660%20[Drosophila%20mojavensis] 1 1681
scaffold_6654	Scipio	protein_match	627144	627308	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 1 55
scaffold_6654	Scipio	protein_match	626861	626996	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 56 100
scaffold_6654	Scipio	protein_match	625460	625502	1.0	-	2	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 101 115
scaffold_6654	Scipio	protein_match	604101	604146	1.0	-	2	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 101 116
scaffold_6654	Scipio	protein_match	603773	604010	1.0	-	1	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 117 195
scaffold_6654	Scipio	protein_match	603164	603484	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 196 302
scaffold_6654	Scipio	protein_match	602326	603077	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 303 553
scaffold_6654	Scipio	protein_match	601664	602257	1.0	-	1	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 554 751
scaffold_6654	Scipio	protein_match	601360	601595	1.0	-	1	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 752 829
scaffold_6654	Scipio	protein_match	599573	601047	1.0	-	2	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 830 1321
scaffold_6654	Scipio	protein_match	599249	599497	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 1322 1404
scaffold_6654	Scipio	protein_match	598496	599185	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 1405 1634
scaffold_6654	Scipio	protein_match	598055	598195	1.0	-	0	gene_id=kassiopeia_gene_id336127 GI16660 [Drosophila mojavensis];Query=GI16660%20[Drosophila%20mojavensis] 1635 1681
# protein sequence = [MKTSHPSHASDFVIDYAVVAGSGSGSAATEQEHIYRPRLSTYAASAASAAAPPAPHNQHQQQAHHHQQQQQHHYQQQQ
# QQQQKTLSKSTAAVNSKRKRETDCDCGCVDSYNSSSVDVVSHNSSSSSSGGSGGGVNGNGNGNSGGSSSLKTAHAKVATSGGHANTQPPSKRSSSGAD
# GDYQLVQHEVLYSLSAEYEVLEFLGRGTFGQVVKCWKRGTSEIVAIKILKNHPSYARQGQIEVSILSRLSQENADEFNFVRAFECFQHKNHTCLVFEM
# LEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILGLP
# FCEAIDMWSLGCVVAELFLGWPLYPGSSEFDQIRYISQTQGLPTEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSKEARKYIFNCLDD
# IGQVNVPTDLEGGQLLAEKTDRREFIDLLKRMLTIDQERRLTPAEALNHSFTRLTHLVDYVYCNNVKASVQMMEVCRRGDFHTVQPAPTLVTNFVPSS
# TENMTFTINNQLTSQVQRLVRDGRPLAYEGLYQIYGGRNVARQYPQARTDTFQHQLVSNILCPPSYQAMPSPTKHVVVGSATMQPPLQVPPQQYVNVP
# VPVSMVEPSSGQRMLLTNRVQASGVAWPQTGRQMALVPSWPQQAPAHSLIVDSTSLFNVEEIYPKHHLNLPRNDLKKESPAHHLAKGSSYRVPRHEKK
# EHQQLSPVKKRVKESSPPHQQRYQRAAHVSPQYHAHHNCNYGGGGGGYGAGAAGTVAASSASSASNIINASGSSSSSSHHHAPAAHAPHGSSSSSSAY
# NSAGHHIVVSNCSGNGGGSAASYHGSSQPPLHAHQQPHVKQPTITIHDTPSPTAVVGDVITISDSEDEGADAAVQPVKQRAHAQSQTSSSLMQQQQQQ
# QQHPHQHQQQQHQQLQHSTSNSHCRSSGGQPLHVPHQPVNYGNAQHSSMSNPNSSANANANANASSSSSQRLASKCGGQLGGSSGANHHSHHSHHSSH
# HNSNSQQQQQQQQLQQQHHSSNSSININNNSSSQQQQQQQLPPPPPHHSSSSSSSNSSNNHHHHHHAGSLGGSGSGNGNGNGYAAAVLDNCAQQQQQQ
# QQQQQQQLHQQQQQQACYQSSSHSNGNGNNSNNNNSNNNSHHTTSNSASTSNQQQPQPPQPLHHHNHHGLQLPPAPISMNSTTIHNSSSSSSGNLCPN
# PVAAVPDIPSSSSTSSSGPATSQSHLSRHKPTQQQHVHLVIPCVTVGDHDPEDARRRHHAAAAAALSQQHHHHHQQQQQQQQPPPPPQQQQQVQVQSS
# QQTPHYQPPPPQAQPQLQSQPSIKYEPGQSQKKRILAMAQSECNYQPQPPPQPPPVASLPHIPTKQEPAEFYPDYPPQQPQQLQLETKRSSWAAGSST
# AAMPLAHPKREAPSVAPVSYAAPTVAPPLAHSKSSSSSSSSISAAAAAAAAAAAAAASVGPPSWGPPQVYRQPSQPPPSSASAGGSGGGGGSGSAGGV
# ATQPPAGPPHHHHSSHSHHHHHQAGTPLGGSPSSTAAAAMLQTDIYAQGDIYRRPTVYVSQAAPTYAYSNRAVVAPPPAHNSSSRQVIPSHPLPAHIQ
# IPSQYSQFGPLSPAQVAASKHAAHFAPTNIWYGAE]
#
##gff-version	3
##query	GI11630%20[Drosophila%20mojavensis] 1 547
scaffold_6680	Scipio	protein_match	17729442	17729490	1.0	-	0	gene_id=kassiopeia_gene_id331218 GI11630 [Drosophila mojavensis];Query=GI11630%20[Drosophila%20mojavensis] 1 16
scaffold_6680	Scipio	protein_match	17729323	17729377	1.0	-	0	gene_id=kassiopeia_gene_id331218 GI11630 [Drosophila mojavensis];Query=GI11630%20[Drosophila%20mojavensis] 1 18
scaffold_6680	Scipio	protein_match	17728179	17729162	1.0	-	2	gene_id=kassiopeia_gene_id331218 GI11630 [Drosophila mojavensis];Query=GI11630%20[Drosophila%20mojavensis] 17 344
scaffold_6680	Scipio	protein_match	17727516	17728123	1.0	-	2	gene_id=kassiopeia_gene_id331218 GI11630 [Drosophila mojavensis];Query=GI11630%20[Drosophila%20mojavensis] 345 547
# protein sequence = [MRSWLTLALLVCIALAAQATKPPRWDPNYIVKGTLYIPYAEIAEPFYAWYDKNTKRSRIDYYGGMVKTYQLAGEGQYG
# TALKLAPISTKEELNKLSCLQVNGTADQVVEIQSILPDAKPFALIGTESFLGYTCDKFRLEQTIGQKKNVYTLWVRYKKSPHYPGSRMPIPVRYEMRG
# YNTLLGSHYDHYYLDYDSYEHDEIPNEVFEIDESLTCTGFPGPGHFATFNPMHEFISGSDEHVEKAFHHFKRKHAIDYSTEKEHEHRKNIFRQNLRYI
# HSKNRAKLTYKLAVNHLADKTDEEMKARRGYKSSGGYNSGKPFPYDVEKFKDEIPSQYDWRLFGAVSPVKDQSVCGSCWSFGTVGHLEGAYFLKNGGN
# LVRLSQQALIDCSWGYGNNGCDGGEDFRVYQWMMQVGGVPTEEEYGPYLGQDGYCHVNNVTLVAPIKGFVNVTSNDPNAFKLAMLKHGPLSVAIDASP
# KTFSFYSNGVYYEPECKNDVDGLDHAVLAVGYGTINGEDYWLVKNSWSTYWGNDGYILMSARKNNCGVMTMPTYVEM]
#
##gff-version	3
##query	GI11853%20[Drosophila%20mojavensis] 1 316
scaffold_6680	Scipio	protein_match	13392250	13392273	1.0	-	0	gene_id=kassiopeia_gene_id331439 GI11853 [Drosophila mojavensis];Query=GI11853%20[Drosophila%20mojavensis] 1 8
scaffold_6680	Scipio	protein_match	13389806	13390459	1.0	-	0	gene_id=kassiopeia_gene_id331439 GI11853 [Drosophila mojavensis];Query=GI11853%20[Drosophila%20mojavensis] 9 226
scaffold_6680	Scipio	protein_match	13389644	13389743	1.0	-	0	gene_id=kassiopeia_gene_id331439 GI11853 [Drosophila mojavensis];Query=GI11853%20[Drosophila%20mojavensis] 227 259
scaffold_6680	Scipio	protein_match	13388961	13389130	1.0	-	2	gene_id=kassiopeia_gene_id331439 GI11853 [Drosophila mojavensis];Query=GI11853%20[Drosophila%20mojavensis] 260 316
scaffold_6680	Scipio	protein_match	13388622	13388791	1.0	-	2	gene_id=kassiopeia_gene_id331439 GI11853 [Drosophila mojavensis];Query=GI11853%20[Drosophila%20mojavensis] 260 316
# protein sequence = [MARLIESNFVPIAMGVAAIVAGALIVHYFINKKSTKPRREPNRTARLRTLVDPNDKYQLPLIEKEVLSADTRRFRFGL
# PSKQHILGLPVGQHIHLIATIDNELVIRPYTPISSDDDVGYVDLIVKVYFKDTHPKFPAGGKMTQYLERMELGDKIAFRGPSGRLQYLGNGTFSIKKL
# RKDPPKQVTAKCVNMIAGGSGITPMLQLVREVLKHSDKDKTQLALLFANQSEKDILLRDELDTLAKQHPDQFKVWYTVDKASEGWTYSVGFVNDEMIA
# AHLLPANDDTIVLLCGPPPMINFACNPALDKLGYHPDLRFAY]
#
##gff-version	3
##query	GI11964%20[Drosophila%20mojavensis] 1 623
scaffold_6680	Scipio	protein_match	11888903	11889751	1.0	-	0	gene_id=kassiopeia_gene_id331548 GI11964 [Drosophila mojavensis];Query=GI11964%20[Drosophila%20mojavensis] 1 283
scaffold_6680	Scipio	protein_match	11888154	11888366	1.0	-	0	gene_id=kassiopeia_gene_id331548 GI11964 [Drosophila mojavensis];Query=GI11964%20[Drosophila%20mojavensis] 284 354
scaffold_6680	Scipio	protein_match	11887890	11888099	1.0	-	0	gene_id=kassiopeia_gene_id331548 GI11964 [Drosophila mojavensis];Query=GI11964%20[Drosophila%20mojavensis] 284 353
scaffold_6680	Scipio	protein_match	11886993	11887802	1.0	-	0	gene_id=kassiopeia_gene_id331548 GI11964 [Drosophila mojavensis];Query=GI11964%20[Drosophila%20mojavensis] 354 623
# protein sequence = [MHFFKLPVRDPVRLETWLKNCGNADILNVAKEKLSNRAVCARHFRYECFMNYKLDRLIPNQTPTLVRVSKDLAWDMEH
# LDENGEATMVKLSMPTLEHLIPPPNFECPLGFTDDARFGRKYVARRRTPPKPLILEPNKRQKLVHEQGNTTETSLIVDTGKEQPLSGKDIDMGPLTDS
# NVTEEMHEDYQLKYEQLRTNFEQLSKENADLKQTIERLEAQAEVLKSSSSTSVAPQLTKSQLYNGIKKYLGATMAALVRMEMFGGAERPWKEDERDFS
# KELLQLGEHPSCETSSSTAAVSTCSDCSLTDGVYACMDEFSYGVCYNLGFVDPNAIRSCDDGFYCNVDGTFCSPRDTSSNLLQYRQQVNLLDRLQFYH
# LLLRSHSLQNLQQNLQLFRPLILRLRSHQNLQPQYLPLNPRPRSLQNLQLPFHLLSLPLRSLQNLQLQYLPLSLPLRSLQSRQLQFHPLSLPLRSLQN
# RQLQFHPLSLPLHSLQNLQLQFHPLSLPLRSLQNRQLQFHPLSLPLRSLQNRQLQFHPLNPQPISLQNPQLQFHPLRLPLRSLQNRQLQFHPLSLPLR
# SLQNRQLQFHPLNPQPISLQNFQLQFHPLRLPLRSLQNPQLQFHPLSLPLRCLQN]
#
##gff-version	3
##query	GI11991%20[Drosophila%20mojavensis] 1 84
scaffold_6680	Scipio	protein_match	11488296	11488404	1.0	-	0	gene_id=kassiopeia_gene_id331575 GI11991 [Drosophila mojavensis];Query=GI11991%20[Drosophila%20mojavensis] 1 36
scaffold_6680	Scipio	protein_match	11480652	11480722	1.0	-	2	gene_id=kassiopeia_gene_id331575 GI11991 [Drosophila mojavensis];Query=GI11991%20[Drosophila%20mojavensis] 37 60
scaffold_6680	Scipio	protein_match	11463121	11463189	1.0	-	0	gene_id=kassiopeia_gene_id331575 GI11991 [Drosophila mojavensis];Query=GI11991%20[Drosophila%20mojavensis] 61 83
scaffold_6680	Scipio	protein_match	11462708	11462782	1.0	-	0	gene_id=kassiopeia_gene_id331575 GI11991 [Drosophila mojavensis];Query=GI11991%20[Drosophila%20mojavensis] 61 85
scaffold_6680	Scipio	protein_match	11462571	11462642	1.0	-	0	gene_id=kassiopeia_gene_id331575 GI11991 [Drosophila mojavensis];Query=GI11991%20[Drosophila%20mojavensis] 61 84
# protein sequence = [MNFASADCQKSRLKQEQQQLLEQEQEQQQELVQVQAELRAQLALGELPAQLQSQREACNWSYYYYNYYYSYYNYYYSY
# YNYYYS]
#
##gff-version	3
##query	GI12240%20[Drosophila%20mojavensis] 1 91
scaffold_6680	Scipio	protein_match	7428653	7428711	1.0	-	0	gene_id=kassiopeia_gene_id331818 GI12240 [Drosophila mojavensis];Query=GI12240%20[Drosophila%20mojavensis] 1 20
scaffold_6680	Scipio	protein_match	7403082	7403140	1.0	-	0	gene_id=kassiopeia_gene_id331818 GI12240 [Drosophila mojavensis];Query=GI12240%20[Drosophila%20mojavensis] 1 20
scaffold_6680	Scipio	protein_match	7393412	7393473	1.0	-	0	gene_id=kassiopeia_gene_id331818 GI12240 [Drosophila mojavensis];Query=GI12240%20[Drosophila%20mojavensis] 1 21
scaffold_6680	Scipio	protein_match	7364905	7365058	1.0	-	1	gene_id=kassiopeia_gene_id331818 GI12240 [Drosophila mojavensis];Query=GI12240%20[Drosophila%20mojavensis] 21 71
scaffold_6680	Scipio	protein_match	7362795	7362854	1.0	-	0	gene_id=kassiopeia_gene_id331818 GI12240 [Drosophila mojavensis];Query=GI12240%20[Drosophila%20mojavensis] 72 91
# protein sequence = [MEVVYSNVGSSECHELAKIIEKDEYIEVLKKNAVECGERTLLAFSDQQREHEHMQRAEHGTGLNGKANTKQLEQEQVR
# ELVRELERKPVCK]
#
##gff-version	3
##query	GI12319%20[Drosophila%20mojavensis] 1 332
scaffold_6680	Scipio	protein_match	6225807	6225852	1.0	-	0	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 1 15
scaffold_6680	Scipio	protein_match	6215986	6216031	1.0	-	0	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 1 15
scaffold_6680	Scipio	protein_match	6202016	6202061	1.0	-	0	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 1 15
scaffold_6680	Scipio	protein_match	6197241	6197461	1.0	-	2	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 16 89
scaffold_6680	Scipio	protein_match	6193749	6193959	1.0	-	0	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 90 159
scaffold_6680	Scipio	protein_match	6192956	6193083	1.0	-	2	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 160 202
scaffold_6680	Scipio	protein_match	6187566	6187955	1.0	-	0	gene_id=kassiopeia_gene_id331896 GI12319 [Drosophila mojavensis];Query=GI12319%20[Drosophila%20mojavensis] 203 332
# protein sequence = [MAWPLLLAVIVIVLSDMTNGGVHGPIEGYNSLDELATTPSGLATIPTAAYTHPKWMEPYFDPSTPRNVTALMGKSAYL
# SCRVRNLANKTVSWIRHRDIHILTVGSYTYTSDQRFQATHHQDTDDWTLQIKWAQKRDAGMYECQISTQPVRSYFVRLNVVVPTATILGGPDLHVDKG
# STINLTCTVKFSPEPPAYIFWYHHEEVINYDSSRGGVSVITEKGDVTTSFLLIQNADLADSGKYSCAPSNADVASVRVHVLNGKYLPTQPDYPTTRLP
# DYQTTRLLRVQLTHTNAPTPAHTQTHALTQILTLMYVRAATVCALCKKKVLHASRCRS]
#
##gff-version	3
##query	GI12323%20[Drosophila%20mojavensis] 1 1163
scaffold_6680	Scipio	protein_match	6115449	6115703	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1 85
scaffold_6680	Scipio	protein_match	6107839	6107951	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 86 123
scaffold_6680	Scipio	protein_match	6107237	6107782	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 124 305
scaffold_6680	Scipio	protein_match	6107084	6107172	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 306 334
scaffold_6680	Scipio	protein_match	6106104	6106217	1.0	-	2	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 335 372
scaffold_6680	Scipio	protein_match	6105948	6106041	1.0	-	2	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 373 404
scaffold_6680	Scipio	protein_match	6104233	6104343	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 405 441
scaffold_6680	Scipio	protein_match	6103857	6104000	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 442 489
scaffold_6680	Scipio	protein_match	6103436	6103639	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 490 557
scaffold_6680	Scipio	protein_match	6101027	6101900	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 558 848
scaffold_6680	Scipio	protein_match	6099350	6099494	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 849 896
scaffold_6680	Scipio	protein_match	6099056	6099289	1.0	-	2	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 897 974
scaffold_6680	Scipio	protein_match	6098883	6098980	1.0	-	2	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 975 1007
scaffold_6680	Scipio	protein_match	6098671	6098733	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1008 1028
scaffold_6680	Scipio	protein_match	6092809	6092951	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1029 1076
scaffold_6680	Scipio	protein_match	6092413	6092503	1.0	-	1	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1077 1106
scaffold_6680	Scipio	protein_match	6091774	6091860	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1107 1135
scaffold_6680	Scipio	protein_match	6090437	6090550	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1136 1173
scaffold_6680	Scipio	protein_match	6088491	6088574	1.0	-	0	gene_id=kassiopeia_gene_id331900 GI12323 [Drosophila mojavensis];Query=GI12323%20[Drosophila%20mojavensis] 1136 1163
# protein sequence = [MSSLEVRNNSAMMKRAEQLKRWEESDTNRAAPSPRHEHSRRIKFSSGCVFLAACLSGDKEEVVQLLEQGADINTANVD
# GLTALHQACIDDKLDMVEFLIEHGADINRQDNEGWTPLHATASCGFVSIACYLVEHNADVAAVNSDGDLALDLAIDVQHMPMINYMEKVVQELNIDVD
# QARRAEEQAMLKDAKRGDLSEVDRPHPKTGATALHVAAAKGYAKVMRLLLAAGCNVDRQDNDGWTPLHAAAHWGQKEAAEMLVESLADMDITNYAGQT
# CIDVADRKMVKFLEELRANKRNKRRPSSQISRISDAIENHVDKTRTKLVRVEVRTDTAKDAENVKPNQHIHAAEHSGEEEAPWRRKTLRTPNDSPTKN
# QVPDKELSGKSANETANDVILRRTQSFENDQKKPIAPATMLTAATTTTTTTTTTLSSPASTVLTPPIRSNNNNNNNNNINNNNNNNNGNSTASASASD
# VETPKPKQSAGNIFKNFFKSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLEEIKSAEELVKKKNLGMNNNNNNNNNNSSSVSTITPATPSTTTAT
# TTTAATVNNSSENDFDDSSQPEAQPPPPPTSPPPAIIPRTATTADDSEIIEAVVGSADTTASFTLAPPAHTHAAGEDDDQQTAVSASYTIVSRREKPV
# ESETDQEKKKQEAEESSSHKQLKTDPVVAKQARVTGTEASGESTPIPARPTELPLAAAAPTESRAATTPTPVTTPGSLESPVRLRDKRNLSSSSAGGS
# AQDADGKSDTASPVAAHADFNARDSLLSLYARRTMESGAGGVGGAATSAAATVVAPSTSSSSSTSISAAERRPSWRLKFDAGSKFKLEDITSGGTYPP
# NQSTIIPSAPAVMAAVNLASTAGSQRRISSGPNALNASNQSLNSVGRPVSAPSESINNSAYVTPPARRYETSTLPATATTTATATTTATTANNSATSA
# SSANHATATSHEDKDNDKENDNRTQTVIQRRRKPKRRSTGVVHIDMDEIDPERQHETANNDNEDKEKESGSERTSRSRTGSTATASTGSDSKSSSNSD
# KAENGDGIDYKALWEAAKLENDKLKQLLKQKDEEAVQTRATLERFANATTKNSLSEIEKRERRAMERKVSELEEELKQLDAYKSDNDRLKEENAALIR
# VISKLSK]
#
##gff-version	3
##query	GI12338%20[Drosophila%20mojavensis] 1 454
scaffold_6680	Scipio	protein_match	5878052	5878336	1.0	-	0	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 1 95
scaffold_6680	Scipio	protein_match	5876441	5876552	1.0	-	0	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 96 132
scaffold_6680	Scipio	protein_match	5875388	5875496	1.0	-	0	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 96 131
scaffold_6680	Scipio	protein_match	5874842	5874964	1.0	-	2	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 133 173
scaffold_6680	Scipio	protein_match	5874063	5874631	1.0	-	2	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 174 363
scaffold_6680	Scipio	protein_match	5873724	5873996	1.0	-	0	gene_id=kassiopeia_gene_id331915 GI12338 [Drosophila mojavensis];Query=GI12338%20[Drosophila%20mojavensis] 364 454
# protein sequence = [MAAQTILFDFTLDAGKTATSIQRQEVARIVRNELEHVFTQLELAYSMESMDNGYFSVLHENKETIITCRIFQQGLLTI
# NVEYYLAAGKEPVLSLDTMRTMELILRQKLDSDRSKYLPPIKRGGYIDIYMTSSDERIIEYDIDTLVYEARSPFQKIQILHSKTLGNMLILDELQNIA
# ESDLIYTETLMGRGIENYEGKEICILGGGDGALLYELLKEKPKHVVMLEIDELVMQACNKYLSSICGDVLEKRKTDQYEIIVGDCVDYMKKFIAEGRK
# FDYVFGDLTDIPISDAPIGECWDFIRTIFEHSFQLLKPDGKYLTHGNGTSCLESLQLFEEQLRLLKPKVKFTTTKAFVPSFMEEWLFYQLTTSTNLTT
# AATTTPTSCIQNATSNTQIVLTPTLQIYPVELSTKEPLLLHSYTVILHAAKTQQLPQSLHNNILPLKKRRKKRVHYHHALVS]
#
##gff-version	3
##query	GI12425%20[Drosophila%20mojavensis] 1 1279
scaffold_6680	Scipio	protein_match	4467840	4467930	1.0	-	0	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 1 30
scaffold_6680	Scipio	protein_match	4465351	4465467	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 31 69
scaffold_6680	Scipio	protein_match	4463010	4463206	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 70 135
scaffold_6680	Scipio	protein_match	4462465	4462661	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 70 135
scaffold_6680	Scipio	protein_match	4462160	4462301	1.0	-	0	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 136 182
scaffold_6680	Scipio	protein_match	4460902	4462080	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 183 575
scaffold_6680	Scipio	protein_match	4460720	4460845	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 576 617
scaffold_6680	Scipio	protein_match	4460460	4460663	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 618 685
scaffold_6680	Scipio	protein_match	4459466	4460395	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 686 995
scaffold_6680	Scipio	protein_match	4459230	4459409	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 996 1055
scaffold_6680	Scipio	protein_match	4458819	4459163	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 1056 1170
scaffold_6680	Scipio	protein_match	4458620	4458757	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 1171 1216
scaffold_6680	Scipio	protein_match	4458371	4458558	1.0	-	2	gene_id=kassiopeia_gene_id332000 GI12425 [Drosophila mojavensis];Query=GI12425%20[Drosophila%20mojavensis] 1217 1279
# protein sequence = [MRQPTLKQTTISIGCCFLLLCSNTVGIAFADSFSDYFSDYECNQPLLERAVLTATSSLTERGPEKARLNAGTSWSAKS
# SDFDQRLIIDLGVVKNVTHIALQGRPHSNEYVTEYTISYGITDLEFADYKEPGGNVKMFKGNTDGNSIHYNVFEVPIIAQWVRINPTRWHDRISMRVE
# LYGCEYISENLYFNGTGLVRYDLRREPIASSQESIRFRFKTAYANGVMMYSRGTQGDYYALQLKDNKMVLNLDLGSGIMTSLSVGSLLDDNVWHDVVI
# SRNRRDIIFSVDRVIVRGRIQGEFSRLNLNRELYLGGVPNVQEGLIVQQNFSGCLENLYLNSTNFIRTMKESYELGEAYLYNKVNTIYACPSPPIYPV
# TFTTRGSYVRLKGYENSQRLNVSFYFRTYEESGVMLHHDFYSGGYIKVFLEFGKVKIDLKAKDKPRIILDNYDEQFNDGKWHSFVLSIERNRLILNID
# QRPMTTTKNLQIATGRLYYIAGGKEKNGFVGCMRLISVDGNYKLPQDWVQGEEVCCGDEVVVDACQMIDRCNPNPCQHKGICHQNSMEFFCDCSQTGY
# AGAVCHTSNNPLSCQALKNVQHVQQRVNLNIDVDGSGPLEPFPVTCEFYSDGRVITTLSHSQEHTTTVDGFQEPGSFAQSIMYDANQLQIEALLNRSH
# SCWQRLSYSCRSSRLFNSPSEPGNFRPFSWWISRNNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWMEDGGDIREKEHLPVRAVKFGD
# TGTPLDEKHGRYTLGPMRCEGDDLFSNVVTFRIADASINLPPFDMGHSGDIYLEFRTTQENAVLFHATGPTDYIKLSLIGGNKLQFQYQAGSGPLGVN
# VGTSYHLNDNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVRALHLTSDLVIGSTTEYRDGYVGCIRALLLNGKMVDLKQYSMRGLYGISTGCVGR
# CESSPCLNNGTCIERYDGYSCDCRWSAFKGPICADEIGVNLRSSSIIRYEFEGSFRSTIAENIRVGFTTTIPKGFLLGFSSNLTGEYLTIQISNSGHL
# RCVFDFGFERQEIIFPKKHFGLGQYHDVRFMRRNSGSTVVLHVDNYEPVEYHFDIKESADAQFNNIQYMYIGKNTSMTDGFVGCVSRVQFDDIYPLKL
# MFQQNPPNNVKSLGTQLTEDFCGVEPVTHPPIEIETRPPPLVDEEKLRKAYNEVNAVLLAFLLVILFLLLLLMFFLIGRYLHRHKGDYLTHEDQGADG
# ADDPDDAVLHSTTGHQVRKRTEIFI]
#
##gff-version	3
##query	GI12568%20[Drosophila%20mojavensis] 1 4641
scaffold_6680	Scipio	protein_match	1609527	1609770	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 1 81
scaffold_6680	Scipio	protein_match	1607796	1608370	1.0	-	2	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 82 273
scaffold_6680	Scipio	protein_match	1606905	1607739	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 274 551
scaffold_6680	Scipio	protein_match	1606241	1606844	1.0	-	2	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 552 753
scaffold_6680	Scipio	protein_match	1606072	1606177	1.0	-	1	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 754 788
scaffold_6680	Scipio	protein_match	1605185	1605340	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 789 840
scaffold_6680	Scipio	protein_match	1601078	1605133	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 841 2192
scaffold_6680	Scipio	protein_match	1599744	1600896	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 2193 2576
scaffold_6680	Scipio	protein_match	1597572	1599680	1.0	-	2	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 2577 3279
scaffold_6680	Scipio	protein_match	1597208	1597403	1.0	-	2	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 3280 3345
scaffold_6680	Scipio	protein_match	1596056	1596254	1.0	-	2	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 3280 3346
scaffold_6680	Scipio	protein_match	1595537	1595654	1.0	-	1	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 3347 3385
scaffold_6680	Scipio	protein_match	1591868	1595472	1.0	-	0	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 3386 4587
scaffold_6680	Scipio	protein_match	1591644	1591806	1.0	-	1	gene_id=kassiopeia_gene_id332141 GI12568 [Drosophila mojavensis];Query=GI12568%20[Drosophila%20mojavensis] 4588 4641
# protein sequence = [MGDSLDNTDTSVDPAVNLSIANYDAFANYLRKAVTILLPEEDVVPESLNNALDDPVNQETIRKFLSDPQVQALYVQRN
# CIKEDDSEQPAEGEEEKEQVSYQISNDVHFTNSRMASLACIKRGMVVEADKSIHSQLRLINFSDGSPYETLHAFISKSLAPYFKSYVKESGRADRDGD
# KMAPSVEKKLAELEMGLLHLQQNIDIPEITLTAHPAVNQVIRKCADENRKAKVVDFGDKVEDSSFLNQLQNGVNRWITEIKKVTKLNRDPGSGTALQE
# ISFWLNLERALYRIQEKRESPEVALTLDILKHGKRFHATVSFDTDTGLKQALATVADYNPLMKDFPINDLLSATELEKIRPAVQQIFSHLRKVRNTKY
# PIQRCLKLIEAISRDLSQQLLKVLGTRRLMHIPFDEFERVMNQCFEIFSCWDDEYDKLQGLLRDIVKKKRDEHLKMVWRVSPAHKKLQTRMEHMRKFR
# RQHEQLRTVILRVLRPTKQAANDDGSAVETKQPYSLDAADANAIEEVNLAYENVKEVDCLDITKEGSEAWEAAVKRYEEKIDRVETRITAHLRDQLGT
# AKNANEMFRIFSRFNALFVRPHIRGAIREYQTQLIQRVKDDIEALHEKFKVQYPQSKSCRLSSVRDLPPVAGSIIWARQIDNQLTMYLKRVEDVLGKG
# WETHIEGQKLKADGDSFRAKLSISEVFHEWARKVQERNFGSSGRIFTIESTRSRTGRGNVLRLRVNFLPEIITLAKEVRNIKNLGFRVPLTIVNKAHQ
# ANQIYPYAISLIESVRTYERTLEKIEDRASIVPLVAGLRKEVLNLVSEGIGLIWESYKLDPYVLRLSECVTQFQEKVDDLLVVEEQLDVDVRSLETCP
# YSAATFVEILSKIQHAVDDLSLRQYSNLSVWVTRLDEEVEKKLALRLQAGIQAWTEALTGNKKEVDTSMDTDAPAQPTHKLGGEPQIQNAVHEIRITN
# QQMYLYPSIEEARFQIMQQFFAWQAIVTSQVRLQSTRYQVGLEKPVSQTYRNLLTKLPDGKILENAYGAIEHKISEVRNYVDEWLRYQSLWDLQADTL
# YGRLGEDVNLWIKCLNDIKQSRTTFDTSDTRRAYGAIIIDYAKVQAKVTLKYDSWHKEALGKFGTLLGTEMTTFHSKVSKSRTDLEMQSIEAASTSDA
# VSFITYVQSLKKDMIAWDKQVEVFREAQRILERQRFQFPNNWLHVDNIEGEWSAFNEIIKRKDTAIQTQVASLQAKIVAEDKAVETRTVDFLNDWEKT
# KPTGGKIRPDDALQQLQIFESKYSRLKEERDNVAKAKEALELQESAVPNNSAERMNVALEELQDLRGVWSELSKVWTQIDETREKPWLSVQPRKLRQQ
# LEAMMAQLKELPARLRMYESYEYVKKLIQSYIKVNMLIVELKSDALKERHWKQLTKQLRVNWIISDLTLGQVWDVNLQKNEGIVKDIILVAQGEMALE
# EFLKQVRESWQNYELDLINYQNKCRIIRGWDDLFNKVKEHINSVAAMKLSPYYKVFEEEALTWEEKLNRINALFDVWIDVQRRWVYLEGIFSGSADIK
# TLLPVETSRFQSISSEFLGLMKKVTKSPKVMDVLNIPAVQRSLERLADLLGKIQKALGEYLERERTSFPRFYFVGDEDLLEIIGNSKNIARLQKHFKK
# MFAGVAAILLNEENNVILGISSREGEEVHFINPVSTVDHPKINEWLSLVEKQMRFTLASLLAQAVQDIKQFRDGKIDPQKYMEWCDKYQAQIVVLAAQ
# ILWSEDVEAALQQASENNNSKPMQRVLGNVENTLNVLADSVLQEQPALRRRKLEHLINEFVHKRTVTRRLITNGVTSPKSFQWLCEMRFYFDPRQTEV
# LQQLTIHMANARFFYGFEYLGVQDRLVQTPLTDRCYLTMTQALESRLGGSPFGPAGTGKTESVKALGNQLGRFVLVFNCDETFDFQAMGRIFVGLCQV
# GAWGCFDEFNRLEERMLSACSQQIQTIQEALKYEMDSNKESITVELVGKQVRVSPDMAIFITMNPGYAGRSNLPDNLKKLFRSLAMTTPDRQLIAEVM
# LFSQGFRSAEKLACKIVPFFKLCDEQLSNQSHYDFGLRALKSVLISAGNVKRDRIMKIKEQMRQRGEENIDEASVAENLPEQEILIQSVCETMVPKLV
# AEDIPLLFSLLSDVFPNVGYTRAEMKGLKEEIRKVCQEDYLVCGEGDEQGAAWMEKVLQLYQISNLNHGLMMVGPSGSGKSTAWRTLLKALERFEGVE
# GVAHVIDPKAISKEALYGVLDPNTREWTDGLFTHILRKIIDNVRGEINKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRVMFEVQ
# DLKFATLATVSRCGMVWFSEDVLSTEMIFENYLSRLRSIPLEDGDEDFVGVMKTTKDKEEEVSPSLQVQRDIALLLQPFFSGDGIVVRTLEYAMEQEH
# IMDFTRLRALSSLFSMLNQSARNVLNFNAQHPDFPCSADQLEQYIPKALVYSVLWSFAGDAKLKVRIDLGDFVRSVTTVPLPGAAGAPIIDYEVSMNG
# EWVPWSNKVPVIEVETHKVASPDIVVPTLDTVRHESLLYTWLAEHKPLVLCGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEY
# RKTPNGVVLSPVQIGKWLVLFCDEINLPDMDSYGTQRVISFLRQLVEHKGFYRASDQAWVSLERIQFVGACNPPTDPGRKPLSHRFLRHVPIIYVDYP
# GETSLKQIYGTFSRAMLRLMPALRGYAEPLTNAMVEFYLASQDRFTQDMQPHYVYSPREMTRWVRGICEAIRPLDSLPVEGLVRLWAHEALRLFQDRL
# VDDSERRWTNENIDLVAHKHFPGINQEEALQRPILYSNWLSKDYMPVNREELRDYVRARLKVFYEEELDVPLVLFDEVLDHVLRIDRIFRQPQGHLLL
# IGVSGAGKTTLSRFVAWMNGLSIFQIKVHNKYTSEDFDEDLRCVLRRSGCKDEKIAFILDESNVLDSGFLERMNTLLANGEVPGLFEGDEYTTLMTQC
# KEGAQREGLMLDSSDELYKWFTQQVMRNLHVVFTMNPSTDGLKDRAATSPALFNRCVLNWFGDWSDSALFQVGKEFTTRVDLEKPNWSPPDFFPSVCP
# LVPANPTHRDAVINSCVYVHQTLHQANARLAKRGGRTMAVTPRHYLDFIHHFVKLYNEKRSDLEEQQLHLNVGLNKIAETVEQVEEMQKSLAVKKQEL
# QAKNEAANAKLKQMFQDQQEAEKKKIQSQEIQIRLADQTVKIEEKRKYVMADLAQVEPAVIEAQQAVKSIRKQQLVEVRTMANPPSVVKLALESICLL
# LGEYATDWKAIRAVIMRENFINSIVSNFGTENITDEVREKMKSKYLSNPDYNFEKVNRASMACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQAD
# VNLASAQETKDLVEQLERSIAAYKEEYAQLISQAQAIKTDLENVQAKVDRSIALLKSLNIERERWESTSETFKSQMSTIVGDVLLSAAFIAYGGYFDQ
# HYRLNLFTTWSQHLQSASIQYRADIARTEYLSNPDERLRWQANALPSDDLCTENAIMLKRFNRYPLIIDPSGQATTFLLNEYAGKKITKTSFLDDSFR
# KNLESALRFGNPLLVQDVENYDPILNPVLNRELRRTGGRVLITLGDQDIDLSPSFVIFLSTRDPTVEFPPDICSRVTFVNFTVTRSSLQSQCLNQVLK
# AERPDIDEKRSDLLKLQGEFRLRLRQLEKSLLQALNDAKGKILDDDSVITTLETLKKEAYDINQKVDETDKVIAEIETVSQQYLPLSVACSNMYFTMD
# SLNQVHFLYQYSLKMFLDIFSTVLYNNPRLEGRTDHSERLGIVTRDLFQVCYERVARGMLHNDRLTFALLMCKIHLKGTGESNLDAEFNFFLRSREGL
# LTNPTHVEGLSSEQIEGVNRLATRLPIFRKLVEKVRSMPELGAWLQQSSPEQCVPQLWDESKALSAIASSVHQLLLIQAFRPDRVIAAAHNVVNTVLG
# VDYMPNAEQELDFAAVVDKQLNCNTPALLCSVPGFDASGRVDDLAAEQNKQISSIAIGSAEGFNQAERAINMACKTGRWVLLKNVHLAPQWLVQLEKK
# MHSLQPHSGFRLFLTMEINPKVPVNLLRAGRIFVFEPPPGIRANLLRTFSTVPAARMMKTPSERARLYFLLAWFHAIVQERLRYVPLGWAKKYEFNES
# DLRVACDTLDTWIDTTAMGRTNLPPEKVPWDALVTLLSQSIYGGKIDNDFDQRLLTSFLKKLFTARSFEADFALVANVDGASGGLRHITMPDGTRRDH
# FLKWIENLTDRQTPSWLGLPNNAEKVLLTTRGTDLVSKLLKMQQLEDDDELAYSVEEQSEQSALAVARSEDGRPSWMKTLHNSATAWLELLPKSLQVL
# KRTVENIKDPLYRYFEREVTSGARLLQTVISDLQDVVLICQGEKKQTNHHRSMLSELVRGIIPKGWKRYTVPMGCTVIQWITDFSMRVQQLQKVSQLV
# SQAGAKELQGFPVWLGGLLNPEAYITATRQCVAQANSWSLEELALDVTITDAGLKTDQKDSSFGVTGLKLQGAQCKNNELLLASTIMMDLPLTILKWI
# KISSEPRVSKLTLPVYLNSTRTELLFTVDLAVAAGQDSHSFYERGVAVLTSTALN]
#
##gff-version	3
##query	GI12687%20[Drosophila%20mojavensis] 1 609
scaffold_6680	Scipio	protein_match	488439	488578	1.0	+	0	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 1 47
scaffold_6680	Scipio	protein_match	496662	496759	1.0	+	1	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 48 79
scaffold_6680	Scipio	protein_match	497047	497114	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 80 102
scaffold_6680	Scipio	protein_match	498667	498734	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 80 102
scaffold_6680	Scipio	protein_match	502958	503184	1.0	+	0	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 103 178
scaffold_6680	Scipio	protein_match	504417	504499	1.0	+	1	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 179 205
scaffold_6680	Scipio	protein_match	506339	506476	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 206 251
scaffold_6680	Scipio	protein_match	507845	507982	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 252 297
scaffold_6680	Scipio	protein_match	510912	511196	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 298 392
scaffold_6680	Scipio	protein_match	515205	515429	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 393 467
scaffold_6680	Scipio	protein_match	515493	515758	1.0	+	2	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 468 556
scaffold_6680	Scipio	protein_match	515977	516135	1.0	+	0	gene_id=kassiopeia_gene_id332259 GI12687 [Drosophila mojavensis];Query=GI12687%20[Drosophila%20mojavensis] 557 609
# protein sequence = [MSVSAMDKLTILTPRTRTPLLTIWLAINMALIVQETGPKRSTTVQSATGGGSMLGDVNISAILDSFSVSYDKRVRPNY
# GGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRS
# IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSS
# EVSLPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY
# VKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGVQQQANPNPNVGGGPGPEHGHGHGHHAHSHGHPHAPKQTVMGP
# LFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQPHGPGPVPGGPGGPGGGGGGGGGGGGGGGPPDAGGDPEAAVPAHLLHPGKVKKDINKLLGITPSD
# IDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLLGEE]
#
##gff-version	3
##query	GI12701%2C%20partial%20[Drosophila%20mojavensis] 1 488
scaffold_6680	Scipio	protein_match	579914	580970	1.0	+	0	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 1 352
scaffold_6680	Scipio	protein_match	581394	581462	1.0	+	2	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 353 375
scaffold_6680	Scipio	protein_match	581520	581576	1.0	+	2	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 353 371
scaffold_6680	Scipio	protein_match	581633	581701	1.0	+	2	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 353 375
scaffold_6680	Scipio	protein_match	581780	581839	1.0	+	2	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 353 372
scaffold_6680	Scipio	protein_match	581900	582237	1.0	+	2	gene_id=kassiopeia_gene_id332273 GI12701, partial [Drosophila mojavensis];Query=GI12701%2C%20partial%20[Drosophila%20mojavensis] 376 488
# protein sequence = [HTHTQTRTQQTHTQSGVVGQAILENADALQQASVHLAILAEHPDSISSQLTPVAAPTTASPTDATTTLAPVVVNAQTV
# ALSHAIAKVQGMLVTSRPSTSASAPLPQHLLPEIILSSAVEQVQKLARIPLAASGPKDLANFAFGPQPGNSQQQQLHGAQRLNENVVKSVKQLVLPIA
# HKTVESLTRIPPASTEAKDLNSFAFGQPGNKPQQQLLSNKALEAQRINENVVKSSKQLVLPIAHTTVESLTRIPPASTETKDLNSFAFGQPPANRQQL
# PLTKVEAQLPKGNTLQPLAKVELLPRITPTATGFKDIKNFAFGILPSSKQQLPSANAKQGLVKAPGISGIGLISLALPALGGTQVQQRPQPSGGSLAS
# FIPTNTAPQSTTNKASKSTTSTGAAGSADLSGDLYKFKYLLDYNGHEETGSRNGDKVGNYFAIGDDAVERIVEYIANEFGFQPHISWRKLEGKEASLP
# AENSLKHYEFKWFNKDTE]
#
##gff-version	3
##query	GI12744%20[Drosophila%20mojavensis] 1 187
scaffold_6680	Scipio	protein_match	1390548	1390775	1.0	+	0	gene_id=kassiopeia_gene_id332313 GI12744 [Drosophila mojavensis];Query=GI12744%20[Drosophila%20mojavensis] 1 76
scaffold_6680	Scipio	protein_match	1390832	1391164	1.0	+	0	gene_id=kassiopeia_gene_id332313 GI12744 [Drosophila mojavensis];Query=GI12744%20[Drosophila%20mojavensis] 77 187
scaffold_6680	Scipio	protein_match	1392204	1392536	1.0	+	0	gene_id=kassiopeia_gene_id332313 GI12744 [Drosophila mojavensis];Query=GI12744%20[Drosophila%20mojavensis] 77 187
scaffold_6680	Scipio	protein_match	1393081	1393263	1.0	+	0	gene_id=kassiopeia_gene_id332313 GI12744 [Drosophila mojavensis];Query=GI12744%20[Drosophila%20mojavensis] 1 61
scaffold_6680	Scipio	protein_match	1393326	1393658	1.0	+	0	gene_id=kassiopeia_gene_id332313 GI12744 [Drosophila mojavensis];Query=GI12744%20[Drosophila%20mojavensis] 77 187
# protein sequence = [MRIDKSLGSNCLLMLLAVLESCDCKRRWSYEFITAEAYSENESKLKPEIRIERVGRYRIGISGSLDVNYEIDNTTMFE
# LIIFQSPSGNLKEFRKLPFTIPKQIFINMKSYYDEIAMADARNCTNLPNFEGNVLLPWPRGLYVFDMCTADNGNYPDILAEGLYKFIFAFSGEVVWNV
# SFYVNIKTKIL]
#
##gff-version	3
##query	GI12992%20[Drosophila%20mojavensis] 1 105
scaffold_6680	Scipio	protein_match	5773999	5774010	1.0	+	0	gene_id=kassiopeia_gene_id332558 GI12992 [Drosophila mojavensis];Query=GI12992%20[Drosophila%20mojavensis] 1 4
scaffold_6680	Scipio	protein_match	5774083	5774418	1.0	+	0	gene_id=kassiopeia_gene_id332558 GI12992 [Drosophila mojavensis];Query=GI12992%20[Drosophila%20mojavensis] 5 116
scaffold_6680	Scipio	protein_match	5783394	5783696	1.0	+	0	gene_id=kassiopeia_gene_id332558 GI12992 [Drosophila mojavensis];Query=GI12992%20[Drosophila%20mojavensis] 5 105
# protein sequence = [MFRLLLIVSALIACAYARPLDDAHATGQGYSYPKPIGSYFYPSTTANGISAQEQGVVGKRVTGSYYYYTPEGELIKIT
# YIADVIGYQPQITTQSLSPCTAKSLCR]
#
##gff-version	3
##query	GI13093%20[Drosophila%20mojavensis] 1 74
scaffold_6680	Scipio	protein_match	7323072	7323186	1.0	+	0	gene_id=kassiopeia_gene_id332658 GI13093 [Drosophila mojavensis];Query=GI13093%20[Drosophila%20mojavensis] 1 38
scaffold_6680	Scipio	protein_match	7337476	7337566	1.0	+	0	gene_id=kassiopeia_gene_id332658 GI13093 [Drosophila mojavensis];Query=GI13093%20[Drosophila%20mojavensis] 1 30
scaffold_6680	Scipio	protein_match	7337697	7337803	1.0	+	2	gene_id=kassiopeia_gene_id332658 GI13093 [Drosophila mojavensis];Query=GI13093%20[Drosophila%20mojavensis] 39 74
# protein sequence = [MPDSFALQQLQQEQQQAQQQQQEQQLLHPLHAVGVPVHNKQLDQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLS]
#
##gff-version	3
##query	GI13095%20[Drosophila%20mojavensis] 1 611
scaffold_6680	Scipio	protein_match	7451335	7451394	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 1 20
scaffold_6680	Scipio	protein_match	7470387	7470428	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 21 34
scaffold_6680	Scipio	protein_match	7475353	7475401	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 35 50
scaffold_6680	Scipio	protein_match	7491281	7491329	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 35 50
scaffold_6680	Scipio	protein_match	7507952	7508000	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 35 50
scaffold_6680	Scipio	protein_match	7535803	7535937	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 51 95
scaffold_6680	Scipio	protein_match	7562139	7562218	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 96 122
scaffold_6680	Scipio	protein_match	7609616	7609759	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 123 170
scaffold_6680	Scipio	protein_match	7609838	7610111	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 171 261
scaffold_6680	Scipio	protein_match	7610205	7610303	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 262 294
scaffold_6680	Scipio	protein_match	7611441	7611518	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 295 320
scaffold_6680	Scipio	protein_match	7612957	7613133	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 321 379
scaffold_6680	Scipio	protein_match	7613212	7613297	1.0	+	2	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 380 408
scaffold_6680	Scipio	protein_match	7613358	7613966	1.0	+	0	gene_id=kassiopeia_gene_id332659 GI13095 [Drosophila mojavensis];Query=GI13095%20[Drosophila%20mojavensis] 409 611
# protein sequence = [MVHIIELVGQPKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPF
# GTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFGPYGAYAQQQQQAA
# LMAAAATAPGSAAAYMNPMAALATQIPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAASVADGVFTNGIPQTAFPHPLHLTIPPQGLP
# NGDAAALQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRA
# TNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKRNQQQQQQQQQQQQQQQQQIQEQQHIQQQIQIQLLQQQQQQQQQQQQQQMLQQHQHHHHQQQ
# QQQQQQQHQLYQQHQQQQQQHHHLHQHHQYNATTTAPSTATITTSPNNPNNNFRPQLANDRNANRNTIPYTFASWRNGTYCYRYSSNSTNASNNNNNN
# SNNNNNSNNNSNENINCSHDTSNYSKVELVEKLFLWQQQKRKA]
#
##gff-version	3
##query	GI13106%20[Drosophila%20mojavensis] 1 60
scaffold_6680	Scipio	protein_match	7801531	7801655	1.0	+	0	gene_id=kassiopeia_gene_id332670 GI13106 [Drosophila mojavensis];Query=GI13106%20[Drosophila%20mojavensis] 1 42
scaffold_6680	Scipio	protein_match	7805818	7805872	1.0	+	1	gene_id=kassiopeia_gene_id332670 GI13106 [Drosophila mojavensis];Query=GI13106%20[Drosophila%20mojavensis] 43 60
scaffold_6680	Scipio	protein_match	7808809	7808863	1.0	+	1	gene_id=kassiopeia_gene_id332670 GI13106 [Drosophila mojavensis];Query=GI13106%20[Drosophila%20mojavensis] 43 60
# protein sequence = [MASSKFSRARHQVHGPSCRLLLFVCQPWQQQQQQQEARRWGSEECEKAKQEQEQEQQQQQ]
#
##gff-version	3
##query	GI13288%20[Drosophila%20mojavensis] 1 1134
scaffold_6680	Scipio	protein_match	10880365	10880429	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 1 22
scaffold_6680	Scipio	protein_match	10892635	10892699	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 1 22
scaffold_6680	Scipio	protein_match	10893328	10893883	1.0	+	1	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 23 207
scaffold_6680	Scipio	protein_match	10894307	10894477	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 208 264
scaffold_6680	Scipio	protein_match	10895726	10896417	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 265 495
scaffold_6680	Scipio	protein_match	10896483	10896601	1.0	+	1	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 496 534
scaffold_6680	Scipio	protein_match	10896661	10896793	1.0	+	2	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 535 579
scaffold_6680	Scipio	protein_match	10896863	10897076	1.0	+	1	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 580 650
scaffold_6680	Scipio	protein_match	10897149	10897942	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 651 915
scaffold_6680	Scipio	protein_match	10898027	10898150	1.0	+	1	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 916 956
scaffold_6680	Scipio	protein_match	10898224	10898628	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 957 1091
scaffold_6680	Scipio	protein_match	10898975	10899103	1.0	+	0	gene_id=kassiopeia_gene_id332849 GI13288 [Drosophila mojavensis];Query=GI13288%20[Drosophila%20mojavensis] 1092 1134
# protein sequence = [MQLIVDKIPMYSKQTTKRNSKKKNDEMNQQAGSSRAPATGGQISPPGGSTNSIVDAQQQQQQQHQQQQQYYTQQQQQQ
# YQQQQRESFLAYQQQQQQHQQQQHQQQQHQQQQRSVGGGNFMLGNELVGGDSLRSLNNTFGPNSEFTSLGGNSSASSLSGLSNSSSQSGQVQAGVGAG
# YPNMVAAASQQQQQQQQQHMSNMDAMSGYNQMGGGMHPVGNGGMMGNGNGQYMNGGGQGSYNGAQGGMGMAGMGGMGYGSAAAQRHHQMTPMNQMQSM
# SMGPGGGMPGMQQQMGAMNPMAKMQGMANGGYPQQQPPQQQQRRMAPYPHPQMHMAQKRAGAGVGVGGMYPNPAQQQQQPPQMYGGQQMHPGAGSGSG
# VPGVPLPMQAGAGNGYGRGGPAGAGAGAGAYGRISAGNGPVMGPGGGPMMPMGGAGMGPGPGCMGQQRFVPQPGGAGVGYAQQSQFYPGGNGGAMGVG
# AGQGGMCPAGPGAVASTGNPYQNQGFQQNYQHSPVPGNPTPPLTPACSVPYVSPNPDIKPPMDSSEEMRLTFPVRDGIILPPFRLLHNLSVSNHVFHL
# KQNVYNTLMCRTDLELQLKCFHQDDRQMNTNWPHTVTVSANATPLNIERSEKNSTALRPLYLKAVCQPGRNTLQLTASSCCCSHLFVLQLVHRPSVRQ
# VLQTLHKRNLLPLEHSVQKIKRNLSLPSVGADGVATGNSPDAAQQCAKISLKCPITKSRIRLPARGHECKHVQCFDLEAYLMINSERGSWRCPECSKS
# AITDTLEIDQYIWAILNTLSTSDVDEVIIDSSANWRALQHNGGMPNAPQSGAPPGSAVAAAGTAGSVNNSNGNNSTSSSNNNSTNSSNNNSLPAIKQE
# LCDDIAKVMSPGSTQLPTWDNSQAMSPYNMHDMNSIANGNMMGNNNAANGAQLGNRSSYDGFNGSHSDNNSLANSDGVNSLDQLNAMEKSLSDQMPHT
# PHTPHTPGAASHPMTPGGPPSVSSSHNEPISGGTPNASNGGNNANNNSTGHNSPQTPGTPSRSLGSSTSMSNTDSQQQQQQQQQQQSQQEQLLNSLIS
# SQAQLKFENDLSADLQNFDPTAAGLDNTGHDLNLLQDMDPMEILSYLDPQPDLNTPPSSGSSNNNASDDLLATLFD]
#
##gff-version	3
##query	GI13383%20[Drosophila%20mojavensis] 1 438
scaffold_6680	Scipio	protein_match	12212940	12213025	1.0	+	0	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 1 29
scaffold_6680	Scipio	protein_match	12214301	12214476	1.0	+	1	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 30 87
scaffold_6680	Scipio	protein_match	12214541	12215010	1.0	+	2	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 88 244
scaffold_6680	Scipio	protein_match	12215256	12215411	1.0	+	0	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 245 296
scaffold_6680	Scipio	protein_match	12215470	12215667	1.0	+	0	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 297 362
scaffold_6680	Scipio	protein_match	12215729	12215876	1.0	+	0	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 363 411
scaffold_6680	Scipio	protein_match	12216161	12216237	1.0	+	2	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 412 437
scaffold_6680	Scipio	protein_match	12217588	12217667	1.0	+	2	gene_id=kassiopeia_gene_id332944 GI13383 [Drosophila mojavensis];Query=GI13383%20[Drosophila%20mojavensis] 412 438
# protein sequence = [MSGEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSV
# QHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDL
# PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLVDVSYGGENGFNQAIELAAES
# LQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIES
# QPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDELDNDCFDLDDY]
#
##gff-version	3
##query	GI13501%20[Drosophila%20mojavensis] 1 538
scaffold_6680	Scipio	protein_match	14065197	14065251	1.0	+	0	gene_id=kassiopeia_gene_id333060 GI13501 [Drosophila mojavensis];Query=GI13501%20[Drosophila%20mojavensis] 1 18
scaffold_6680	Scipio	protein_match	14066123	14066168	1.0	+	0	gene_id=kassiopeia_gene_id333060 GI13501 [Drosophila mojavensis];Query=GI13501%20[Drosophila%20mojavensis] 1 15
scaffold_6680	Scipio	protein_match	14066735	14066898	1.0	+	2	gene_id=kassiopeia_gene_id333060 GI13501 [Drosophila mojavensis];Query=GI13501%20[Drosophila%20mojavensis] 19 73
scaffold_6680	Scipio	protein_match	14067012	14067261	1.0	+	0	gene_id=kassiopeia_gene_id333060 GI13501 [Drosophila mojavensis];Query=GI13501%20[Drosophila%20mojavensis] 74 156
scaffold_6680	Scipio	protein_match	14077834	14078978	1.0	+	2	gene_id=kassiopeia_gene_id333060 GI13501 [Drosophila mojavensis];Query=GI13501%20[Drosophila%20mojavensis] 157 538
# protein sequence = [MAKLFVVFAVLALAAIGSASAQVRVKRQSSTEEPKKEESFEKELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAI
# RCPAGLYFDIEKQTCDWKESVKNCKSKNKERRVKPLLHTDEPLCQDGFLACGDGNCIERGLFCNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLP
# DCFCSEDGTSIPGDLPAKDVPMMITITFDDAINNNNIELYKEIFKGRKNPNGCDIKATYFVSHKYTNYSAVQETSRKGHEIAVHSITHNDEERFWSNA
# TVDDWAKEMAGMRIIIEKYANITDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMVM
# NELDRREDPANDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWIDEILANHNDVYFVTMTQVIQWMQ
# NPRTVSEVKNFEPWREKCVVDGKPACWVPNSCKLSSKEVPGETINLQTCVRCPNNYPWLNDPTGDGFF]
#
##gff-version	3
##query	GI13695%20[Drosophila%20mojavensis] 1 90
scaffold_6680	Scipio	protein_match	17911508	17911681	1.0	+	0	gene_id=kassiopeia_gene_id333252 GI13695 [Drosophila mojavensis];Query=GI13695%20[Drosophila%20mojavensis] 1 58
scaffold_6680	Scipio	protein_match	17919503	17919589	1.0	+	0	gene_id=kassiopeia_gene_id333252 GI13695 [Drosophila mojavensis];Query=GI13695%20[Drosophila%20mojavensis] 59 87
scaffold_6680	Scipio	protein_match	17924711	17924806	1.0	+	0	gene_id=kassiopeia_gene_id333252 GI13695 [Drosophila mojavensis];Query=GI13695%20[Drosophila%20mojavensis] 59 90
# protein sequence = [MSGSCEVINIISTRAASFHSHSHSHSHSHSPTQHHSTTSIAIATPTAPVAHMFLVYDVEQQQQEQQQQQEQQQQQEQQ
# QLQDLQHTESIK]
#
##gff-version	3
##query	GI13869%20[Drosophila%20mojavensis] 1 51
scaffold_6680	Scipio	protein_match	21144122	21144187	1.0	+	0	gene_id=kassiopeia_gene_id333422 GI13869 [Drosophila mojavensis];Query=GI13869%20[Drosophila%20mojavensis] 1 22
scaffold_6680	Scipio	protein_match	21165632	21165739	1.0	+	0	gene_id=kassiopeia_gene_id333422 GI13869 [Drosophila mojavensis];Query=GI13869%20[Drosophila%20mojavensis] 23 58
scaffold_6680	Scipio	protein_match	21184216	21184302	1.0	+	0	gene_id=kassiopeia_gene_id333422 GI13869 [Drosophila mojavensis];Query=GI13869%20[Drosophila%20mojavensis] 23 51
# protein sequence = [MRLGPLESRSVTAVSGHQLVQQRANVQPQSPSSSQSPSQSQSAQQLQPHLT]
#
##gff-version	3
##query	GI13911%20[Drosophila%20mojavensis] 1 206
scaffold_6680	Scipio	protein_match	22040490	22040641	1.0	+	0	gene_id=kassiopeia_gene_id333461 GI13911 [Drosophila mojavensis];Query=GI13911%20[Drosophila%20mojavensis] 1 51
scaffold_6680	Scipio	protein_match	22044963	22045410	1.0	+	1	gene_id=kassiopeia_gene_id333461 GI13911 [Drosophila mojavensis];Query=GI13911%20[Drosophila%20mojavensis] 52 200
scaffold_6680	Scipio	protein_match	22046281	22046746	1.0	+	1	gene_id=kassiopeia_gene_id333461 GI13911 [Drosophila mojavensis];Query=GI13911%20[Drosophila%20mojavensis] 52 206
# protein sequence = [MDRFDCLAGCAAVRLYGCVPLPYVKAVASPTVAVVHAMCCLSMHRKKSQTSVIIQAGESKYSHNYFENFNMSIINNTL
# NLDMMIRKPLTHGLKMRVDFSISLGKSKHYQSVFANIVDVCGVVSAIHNNIFKTWFQSMLEHGNFMYNCPVTEGHYFLRNWRMEAHMVPQYLYAGDYR
# VNCHMFFGKLKTKHEDFVVEMKIFALLKSS]
#