##gff-version	3
##query	GD21853%20[Drosophila%20simulans] 1 1402
2L	Scipio	protein_match	17417432	17418986	1.0	-	0	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1 518
2L	Scipio	protein_match	17400915	17401365	1.0	-	2	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 519 669
2L	Scipio	protein_match	17400195	17400411	1.0	-	1	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 670 741
2L	Scipio	protein_match	17398723	17399445	1.0	-	0	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 742 982
2L	Scipio	protein_match	17397923	17398156	1.0	-	0	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 983 1060
2L	Scipio	protein_match	17397673	17397864	1.0	-	0	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1061 1124
2L	Scipio	protein_match	17396250	17396338	1.0	-	0	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1125 1154
2L	Scipio	protein_match	17343817	17344058	1.0	-	1	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1155 1234
2L	Scipio	protein_match	17340745	17340950	1.0	-	1	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1155 1222
2L	Scipio	protein_match	17339330	17339542	1.0	-	2	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1235 1305
2L	Scipio	protein_match	17339014	17339184	1.0	-	2	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1306 1362
2L	Scipio	protein_match	17338433	17338551	1.0	-	2	gene_id=kassiopeia_gene_id402798 GD21853 [Drosophila simulans];Query=GD21853%20[Drosophila%20simulans] 1363 1402
# protein sequence = [MAARRCLNQLRQRYITNRFNICTCAIFLIFLPFILAIEETTFAGLSAENAARMLAGSPGDVEKSSSLHHSEMSLVLPH
# DTYPGFSIKKFKTHPVKINGSSHSGAAAYHMLDTDYSKYFTVLEDGVVMTTADISPLVNRPVQLVVVEQTPNATNTHNLQLFVMHRNDMLRFSGSLLD
# ASGEVRENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQISAKSLVINGDDESGVWLVTNRPLDREERAHYDL
# SVEASDVDGLDKTVSKIQITVLDENDNRPIFKSLDYKFAIAGQKSANMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVIIVPQTGEIMLA
# GEPTSNELLIEVIAHDLRYPSLLSAKPAKVLLEFLAAEPVSFIMQHLEHDEINNHSHHREKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKE
# TFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQ
# ARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKK
# DSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDAHNVDEDIPLGTSILRVKAMDSD
# SGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVAS
# DKDGDNVRFGFVGGGTSSGQFVIEDITGVIRLHNKAISLDKDKYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEG
# APNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFD
# RQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLKKPLDSRQKNAPIYLNRSNEPVETILLPINVSHPNCG
# EGRIMSPDSKGCMDRNECLDMPCMNGATCINLEPRLRYRCICPDGFWGENCELVQEGQTLKLSMGALAAILVCLLIILILVLVFVVYNRRREAHIKYP
# GPDDDVRENIINYDDEGGGEDDMTAFDITPLQIPIGGPMPPELAPMKMPIMYPVMTLMPGQEPNVGMFIEEHKKRADGDPNAPPFDDLRNYAYEGGGS
# TAGSLSSLASGTDDEQQEYDYLGAWGPRFDKLANMYGPEAPNPHNTELEL]
#
##gff-version	3
##query	GD21879%20[Drosophila%20simulans] 1 384
2L	Scipio	protein_match	16950649	16950703	1.0	-	0	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 1 18
2L	Scipio	protein_match	16929703	16929745	1.0	-	0	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 1 14
2L	Scipio	protein_match	16895702	16895924	1.0	-	2	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 19 93
2L	Scipio	protein_match	16890188	16890315	1.0	-	1	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 94 135
2L	Scipio	protein_match	16888581	16888846	1.0	-	2	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 136 224
2L	Scipio	protein_match	16887700	16888179	1.0	-	0	gene_id=kassiopeia_gene_id402822 GD21879 [Drosophila simulans];Query=GD21879%20[Drosophila%20simulans] 225 384
# protein sequence = [MFGHLNLLAALFFIGTLKDFRVAGLRLTEVRIPMYVIKGTAAQLECLYDLDGEALYSVKWYKDGNEFYRYVPRDMPPA
# QTFLLPGVNVDVSTPRRRKTECANKTSSEAGTLRCALLSIDPHFAQKIVFTALFARYYLPDEGSPKISGGRPRYQIGDYVRVNCTAGRSKPAVKLSWQ
# VNGEPVEQQKLRKYDTIVSGRDGLETSVLGLQFRVEQKHFRKGNMKLKCIAELSTVYWRCNEESVEGDRPQKAPVLESRETVYASNSRADPVQGTSYR
# ELFVTKILSLLFVQTNAASSTASAPSTPITPLVLLPVALAVMVMATLAQGIARDIDTDKISMDRTAPGGIGITKGAQQARELLAGREEENRRTSHGKS
# ATQLEKMSLTAR]
#
##gff-version	3
##query	GD21931%20[Drosophila%20simulans] 1 327
2L	Scipio	protein_match	15653708	15653777	1.0	-	0	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 1 23
2L	Scipio	protein_match	15648839	15648917	1.0	-	0	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 1 26
2L	Scipio	protein_match	15622189	15622261	1.0	-	0	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 1 24
2L	Scipio	protein_match	15617948	15618159	1.0	-	2	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 24 94
2L	Scipio	protein_match	15616758	15616893	1.0	-	0	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 95 139
2L	Scipio	protein_match	15616442	15616698	1.0	-	2	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 140 225
2L	Scipio	protein_match	15616211	15616382	1.0	-	0	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 226 282
2L	Scipio	protein_match	15615591	15615724	1.0	-	2	gene_id=kassiopeia_gene_id402870 GD21931 [Drosophila simulans];Query=GD21931%20[Drosophila%20simulans] 283 327
# protein sequence = [MQKPALKLRRLFIITAVYIASLPGLTVGLRNVNVRIPSAVKRGDNALLICNYDIENDTLYTVKWYRGRREFYRYTPKE
# NPAWKIFTKTNEIDVETAQSNASHVLLRNVPTSISGKFACEVSADAPTFDTSIVAADMEVVELPTQRPIITGIHSRYRLGDVINGNCSSDYSKPAANL
# TWWINDIQVPPNYLRIYDIQRHVAEHLESAVLEIKFVVTVHHYIKSRLKLKCSARIHEIYAQESEKLIEEDRPRILASGRSPDMNMYPFDQPGDGDEH
# NELFLIHSNAACGPFAWHPILFLLLWPSFWVLGAWENWLWNLLEARLFGRAVR]
#
##gff-version	3
##query	GD21978%20[Drosophila%20simulans] 1 474
2L	Scipio	protein_match	14736083	14736247	1.0	-	0	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 1 55
2L	Scipio	protein_match	14735915	14735972	1.0	-	0	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 56 74
2L	Scipio	protein_match	14735513	14735570	1.0	-	0	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 56 74
2L	Scipio	protein_match	14735264	14735398	1.0	-	2	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 75 119
2L	Scipio	protein_match	14728571	14729002	1.0	-	2	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 120 263
2L	Scipio	protein_match	14727868	14728459	1.0	-	2	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 264 461
2L	Scipio	protein_match	14727695	14727734	1.0	-	1	gene_id=kassiopeia_gene_id402916 GD21978 [Drosophila simulans];Query=GD21978%20[Drosophila%20simulans] 462 474
# protein sequence = [MKGWFDAFRDDGGPTLYSFSNRTPVTGDVSIVAVSVLFATFYVAFLVIFPGVRKQKFTTFSTVTLSLFVGLVILITRL
# GSAWHVAHATIIAPYKAFSREKLPARIGTHIGLMHVNVTLTAIPIGNWTPPDIDYNERFTWEGANDMSANYRHALQRGLPFPILTVAEYFSLGREGFS
# WGGQYRAAGYFASIMLWASLASWLLMNLLLIAVPRYGAYMKALTGALLVCTTVGYHCLLPKRPLSIHLEGGRLEFHFGWCYWLVLVAGILCFIAGVLI
# SIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYRKPRNSRSLEDPPGLGSRILRRLSSKARDLQPGTAPRRDSPAGVSSSGGVENKGFQSDAPK
# SPWRYPFRRSQQLAQQQHSHPLHQHPLQQHHQHHQHHHQQQLQFVGGPVVQHPMHHMQRTMSQDSGSSIASAAVQISPLHKHALARMLPNPPVERIRD
# MDHW]
#
##gff-version	3
##query	GD22023%20[Drosophila%20simulans] 1 622
2L	Scipio	protein_match	13732648	13732860	1.0	-	0	gene_id=kassiopeia_gene_id402956 GD22023 [Drosophila simulans];Query=GD22023%20[Drosophila%20simulans] 1 71
2L	Scipio	protein_match	13732172	13732390	1.0	-	0	gene_id=kassiopeia_gene_id402956 GD22023 [Drosophila simulans];Query=GD22023%20[Drosophila%20simulans] 1 73
2L	Scipio	protein_match	13731702	13732080	1.0	-	0	gene_id=kassiopeia_gene_id402956 GD22023 [Drosophila simulans];Query=GD22023%20[Drosophila%20simulans] 72 197
2L	Scipio	protein_match	13730368	13731641	1.0	-	2	gene_id=kassiopeia_gene_id402956 GD22023 [Drosophila simulans];Query=GD22023%20[Drosophila%20simulans] 198 622
# protein sequence = [MPHIQCLWVCLVFLMLLVDFIQPMWLNVCSRPHVITHKKYVERSKVIPYQHRSWWSGWQTKYRTEYYTDEETAYMTVM
# RPRCCEGYEGSVDNCKPVCSQQCPQHGFCSSPNTCSCNTGYSGLDCHPVCPTECGKNEFCDRPGVCSCLNGYSRTSPSDNCLPVCEEECGHHSFCSEP
# GQCECEPGYEKLGNGTACHPVYGYEDDSNGNCSPICQKNCGQNSRCVRPGVCECENGYTGDDGGTNCQPVCSTCPENGLCLSPGVCVCKPGYVMRNDL
# CQPHCENCSDSEHCVAPNQCECLPGFESSGADQECKPKCSKGCTNGFCFAPETCVCSIGYQMGPNQVCEPQCSLNCVHGKCTSPETCTCDPGYRFKDN
# SHHECDPICDSGCSNGECMAPNICICHGGYQPNSTNPVTSMCQPVCEDCQFGDCVAPNVCECSVGYVNINGVCELQTTTDSHEYSTTTAEFQTSTAEA
# EIQTPTSEVPHLNCTAGCMCWIEYDGMGTFNTAKCAKICADPQDKPCLNLDNCHCDLSSGQLVCQEDSDADYSGENSRYVCHISPAKRARSEAEVRIP
# DRTESSAKFMIIVGSCAGMILGVAATIIGTKYYRRSTSRQNFEAEQAIYECDFE]
#
##gff-version	3
##query	GD22223%20[Drosophila%20simulans] 1 1130
2L	Scipio	protein_match	10638923	10639530	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 1 203
2L	Scipio	protein_match	10638105	10638219	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 204 241
2L	Scipio	protein_match	10633603	10633739	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 242 287
2L	Scipio	protein_match	10633328	10633490	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 288 341
2L	Scipio	protein_match	10631455	10631546	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 342 372
2L	Scipio	protein_match	10630656	10630797	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 373 419
2L	Scipio	protein_match	10629818	10629957	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 420 466
2L	Scipio	protein_match	10628688	10628865	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 467 525
2L	Scipio	protein_match	10628023	10628200	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 467 525
2L	Scipio	protein_match	10626441	10626597	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 467 518
2L	Scipio	protein_match	10623723	10623904	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 526 586
2L	Scipio	protein_match	10622775	10622984	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 587 656
2L	Scipio	protein_match	10620084	10620228	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 657 704
2L	Scipio	protein_match	10618828	10618932	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 705 739
2L	Scipio	protein_match	10612008	10612883	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 740 1031
2L	Scipio	protein_match	10611686	10611810	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 1032 1073
2L	Scipio	protein_match	10610890	10610956	1.0	-	1	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 1074 1095
2L	Scipio	protein_match	10610584	10610688	1.0	-	0	gene_id=kassiopeia_gene_id403149 GD22223 [Drosophila simulans];Query=GD22223%20[Drosophila%20simulans] 1096 1130
# protein sequence = [MSQHFTSIFENLRFVTIKRATNAQQQQQQQQLQQQQQLQQQQQQLQQQKAQAQQQNSRKIKTQATPTVNGNGLLSGNP
# NGGGGDSSPSHEVDHPGGAQGAQGAAGLPSSSGTPLRHHKRASISTASPPIRERRGTNTSIVVELDGSGSGSGSGAGGGGGQGAGCPPSGSGTASGKS
# SRELSPSPKNQQQPRKMSQDYRSRAGSFMHLDDEGRSLLMRKPMRLKNIEGRPEVYDTLHCKGREILSCSKATCTSSIMNIGNAAVEARKPDLILEHA
# KDFLEQYFTSIKRTSSTAHETRWKQVRQSIETTGHYQLTETELIYGAKLAWRNSSRCIGRIQWSKLQVFDCRYVTTTSGMFEAICNHIKYATNKGNLR
# SAITIFPQRTDAKHDYRIWNNQLISYAGYKQADGKIIGDPMNVEFTEVCTKLGWKSKGSEWDILPLVVSANGHDPDYFDYPPELILEVPLTHPKLPVP
# YSMANSSPLATYVLDAAELYLLCLWQAVFEAGQLALGTQRLADPVSNRMLNLCFGTVAMKMQLDTRTPTSLWKDKAVGEMNIALLHSYQSRNGTSLDH
# HTACESFLKHFENESKLRNGCPADWIWIVPPLSGSITPVFHQEMALYYLKPSFEYQDPAWRTHVWKKGRGESKGKKPRRKFNFKQIARAVKFTSKLFG
# RALSKRIKATVLYATETGKSEQYAKQLCELLGHAFNAQIYCMSDYDISSIEHEALLIVVASTFGNGDPPENGEPGDHVGIFPANRTELVDGLLNRLVG
# VDNPDEVLQLQLLKEKQTSNGIFKSWEPHDKIPPDTLRNLLARFFDLTTPPSRQLLTLLAGFCEDTADKERLELLVNDSSAYEDWRHWRLPHLLDVLE
# EFPSCRPPAPLLLAQLTPLQPRFYSISSSPRRVSDEIHLTVAIVKYRCEDGQGDERYGVCSNYLSGLRADDELFMFVRSALGFHLPSDRSRPIILIGP
# GTGIAPFRSFWQEFQVLRDLDPTAKLPKMWLFFGCRNRDVDLYAEEKAELQKDQILDRVFLALSREQAIPKTYVQDLIEQEFDSLYQLIVQERGHIYV
# CGDVTMAEHVYQTIRKCIAGKEQKSEAEVETFLLTLRDESRYHEDIFGITLRTAEIHTKSRATARIRMASQP]
#
##gff-version	3
##query	GD22291%20[Drosophila%20simulans] 1 709
2L	Scipio	protein_match	10019565	10020486	1.0	-	0	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 1 307
2L	Scipio	protein_match	10019013	10019185	1.0	-	2	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 308 365
2L	Scipio	protein_match	10018405	10018577	1.0	-	2	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 308 365
2L	Scipio	protein_match	10018061	10018286	1.0	-	0	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 366 440
2L	Scipio	protein_match	10017723	10017801	1.0	-	2	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 441 467
2L	Scipio	protein_match	10017488	10017666	1.0	-	1	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 468 526
2L	Scipio	protein_match	10017031	10017417	1.0	-	2	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 527 655
2L	Scipio	protein_match	10016800	10016960	1.0	-	2	gene_id=kassiopeia_gene_id403215 GD22291 [Drosophila simulans];Query=GD22291%20[Drosophila%20simulans] 656 709
# protein sequence = [MHIGLSLVCLILSGISKVLAVQLCCPANSLLFKYSRSADNAEIFQCASAASNISELPDLAQVIGKLIAPMGLGLEEAT
# NNDSGHHRFALSKCQNFSSLSISDLGERTLNLRNNSCIGLLNRRLIVLSCEFEKNVPSQSVGFVNKCCPQGFIYVSENNTCKPGESDFFVYTSIISSP
# IIFFDNTLNCSDHRALVEYTVSSGKVHFHNNSLIWKDGSNSLPSSKFCIEAIHDSGDADLDGGAFPEQKFLVRACQETKICQKIPCIRRCCAEGEMYA
# KGNFSTYCKTDGTDFKFEGFQNLNINANFSKPSDFGIVHGLQCPKFRLDPDNFPDDSHTINASNGSLIIHNTFKTYTNTQYCVERVRPNQKVVTGDRI
# RFKMYPIGLLISCCFYALTLIVYISIAKLRNLPGKILICLVSSLFAAYLGIALGQLRPTSNDDICFLSGFFVYFCLMAAFSWMNITSFDIWKTFGSTK
# IKSCEKSDLRRQFIWYSCYGWGLPTLLTAITIAFTKSDILPDAVRPNFGHGRCWFTYDSFGSASLLFFSGPVGILFIINLVLFVLTMKYCNKVKNEIY
# KMQSLNSDKPVLKRRFFQDKTRFVMNTKLCFVMGITWLLEIVSILFYDHKKTFFWTISDSFNVLLGIFVFIIFVFKRRIYNEIMFKFGLQSNPSSLST
# RTRAGLTKSCAPTSTAMTTLRHSPGSCEFKRQTSTRPENEVML]
#
##gff-version	3
##query	GD22333%20[Drosophila%20simulans] 1 595
2L	Scipio	protein_match	9654102	9654168	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 1 22
2L	Scipio	protein_match	9606899	9607038	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 23 69
2L	Scipio	protein_match	9606591	9606635	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 70 84
2L	Scipio	protein_match	9603657	9603827	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 85 141
2L	Scipio	protein_match	9600703	9600747	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 142 156
2L	Scipio	protein_match	9598862	9598909	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 142 157
2L	Scipio	protein_match	9597288	9597397	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 157 193
2L	Scipio	protein_match	9590793	9590973	1.0	-	1	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 194 253
2L	Scipio	protein_match	9589478	9589553	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 254 278
2L	Scipio	protein_match	9588916	9589110	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 279 343
2L	Scipio	protein_match	9588063	9588149	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 344 372
2L	Scipio	protein_match	9584068	9584154	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 373 401
2L	Scipio	protein_match	9581540	9581626	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 373 401
2L	Scipio	protein_match	9579996	9580105	1.0	-	2	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 402 438
2L	Scipio	protein_match	9579713	9579927	1.0	-	0	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 439 510
2L	Scipio	protein_match	9579475	9579648	1.0	-	1	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 511 568
2L	Scipio	protein_match	9578946	9579027	1.0	-	1	gene_id=kassiopeia_gene_id403255 GD22333 [Drosophila simulans];Query=GD22333%20[Drosophila%20simulans] 569 595
# protein sequence = [MDSPLPASLSLFVLLIFLAIIKESCQGPHEKRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTT
# NAWLNLLMMMAMMIMMMMARHDSQLQPNATELEEQDERSGRRLLGHDIKMHIVAGPTATISIQDEKNQLLITNLWLSLEWNDYNLRWNETEYGGVKDL
# RITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLVLNSEDGGDLSDFITNGE
# WYLLAMPGKKNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLI
# GVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRPGRKITRKTILLSNR
# MKELELKERSSKSLLANVLDIDDDFRHTISGSQTAIGSSASFGRPTTVEEHHTAIGCNHKDLHLILKELQFITARMRKADDEAELIGDWKFAAMVVDR
# FCLIVFTLFTIIATVTVLLSAPHIIVQ]
#
##gff-version	3
##query	GD22425%20[Drosophila%20simulans] 1 1063
2L	Scipio	protein_match	8036796	8036804	1.0	-	0	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 1 3
2L	Scipio	protein_match	8036549	8036729	1.0	-	0	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 4 63
2L	Scipio	protein_match	8036184	8036489	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 64 165
2L	Scipio	protein_match	8034766	8034870	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 166 200
2L	Scipio	protein_match	8034473	8034571	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 166 198
2L	Scipio	protein_match	8034294	8034392	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 199 231
2L	Scipio	protein_match	8034125	8034223	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 232 264
2L	Scipio	protein_match	8033215	8033338	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 265 306
2L	Scipio	protein_match	8031371	8032923	1.0	-	1	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 307 823
2L	Scipio	protein_match	8031157	8031255	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 824 856
2L	Scipio	protein_match	8030970	8031062	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 857 887
2L	Scipio	protein_match	8030719	8030784	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 888 909
2L	Scipio	protein_match	8029403	8029656	1.0	-	2	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 910 994
2L	Scipio	protein_match	8029066	8029161	1.0	-	0	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 995 1026
2L	Scipio	protein_match	8028810	8028920	1.0	-	0	gene_id=kassiopeia_gene_id403346 GD22425 [Drosophila simulans];Query=GD22425%20[Drosophila%20simulans] 1027 1063
# protein sequence = [MNKVEFKNKNKDQGPCARVRKIRPINMGGNVEQRPWTPTVRIGRIAAETTNPGPATVQLPTLIGSKVPDSKKKAAPSY
# SFGHKLGGKYDTSGPGPAQYNVTGMRAKGRDYPRAATLQSRPKELTRFSNPGPGEYDVVPAAKAVIDATPKYTFGQRPVALKTFQIPAPGAYCPEKVK
# LNKTPEFSFGIKHHEQRPDYTPAPGTYKPEQVVLEHIPAYSFGLKTKHIQVSDTPAPGAYSPEKSRLHSTPAYSIAGKASQDVVDCTPGDYSPEKCRL
# DHTPAYSFGGKNDPKIENNTPAPGDYHPEKVRQDHNPAFSFAGRHDLHKPNDTPAPGAYCPEKVRQDHNPAFSMAGKHTQKVASDTPAPGDYSPEKVR
# LDHTPAYTFGGKNDPKVESNTPAPGDYHPEKVRQDHNPAFSFAGRHDLQKPSDTPAPGAYFPEKVRQDHNPAFTMAGKHDPKVSNDTPAPGDYSPEKV
# RLDYTPSFTFAGKNNPKVENNTPAPGDYHPEKVRQDHNPAFSFAGRHDLHKPSDTPAPGAYSPEKVRQDHNPAFSMAGKYIEKITNGTPAPGDYCPEK
# VRLDHTPAFTFGGKNDPKVENNTPAPGDYHPEKVRQDHVPAFSFAGRHDLHKPSETPAPGAYSPEKVRQDHNPAFSMAGKHDPKVTNDTPAPGDYHPE
# KVRLDHNPAFSFAGRHDLQKPSETPAPGDYFPEKVRQDFNPAFTFAGKHDPRSLSESPAPGDYSPEKVRLDHAPAYSFGGKHDIKTEHLHPAPCDYAP
# EKVRLDHTPAYTIAGRPAADHVSQTPAPCDYHPEQCQVDSTPAFTFGMRLGRERISDTPAPSAYEPEKHSLHSTPAYSFGTKSDIRVTTDAPAPGHYH
# PEQCKLDSSPAYSFGLKTVPTASLPEPKGAYIEDRIVQRRERRLASPAPNVYKIPTVMGSSKEGKIRSAPAYTITGREKPPLIPVMIFPGPGYYDGEY
# TVVKPKPPVFSMRGKYKMGSEDSKPGPGAHCPEKYWEKRSPPAISFGILHSPYIKKPMPVNVPQRCVNLSHVPAYSFGIKHSQYLGRLNEKNTEFDYS
# FSGIC]
#
##gff-version	3
##query	GD22479%20[Drosophila%20simulans] 1 1399
2L	Scipio	protein_match	7499271	7499332	1.0	-	0	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 1 21
2L	Scipio	protein_match	7497313	7498602	1.0	-	1	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 22 451
2L	Scipio	protein_match	7496989	7497250	1.0	-	1	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 452 538
2L	Scipio	protein_match	7496659	7496926	1.0	-	0	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 539 627
2L	Scipio	protein_match	7495332	7495485	1.0	-	2	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 628 679
2L	Scipio	protein_match	7494918	7495068	1.0	-	2	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 628 678
2L	Scipio	protein_match	7493936	7494114	1.0	-	1	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 679 737
2L	Scipio	protein_match	7492982	7493880	1.0	-	2	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 738 1037
2L	Scipio	protein_match	7491820	7492905	1.0	-	0	gene_id=kassiopeia_gene_id403399 GD22479 [Drosophila simulans];Query=GD22479%20[Drosophila%20simulans] 1038 1399
# protein sequence = [MFRIFLCGIILQYALLINATGLYSVVGPGTLRSNSKYNVVVSVHKADAPSQIKVSLNGPSYNETKQIELPPMSTQNVE
# FEVPKLATGNYNLTAEGLSGVVFKNSTKLNYADEKPSVFVQTDKATYKPADLVQFRILFLDENTRPAKIEKPISVIITDGGQNRIKQLSDVKLTKGVF
# SGELQLSEQPVLGTWKISVSVDGDNRETKSFEVDKYVLPKFEVIVDTPKAAVIEDKVIKATIRAKYTYGKPVKGKATVSMERSYGYFGNLGENDYKQE
# KTIDVDGKGHVEFDIISWTQRGQYLPPLKIFAVVTEELTGNKQNATATVVLHQQRYMIEAYERPDHFEANKSFIYQVVVKNVDGSPVTSSAKNVKIGF
# TNTFSYFNEMPPVSRINYEAPVNENGIATFNVTLPDSESRYYRIFASFDRSINQLGSISKFEPTMISREPLKIQVNTKKPRLGERVSFDVVSIEDLPY
# FVYTIVARGNVILSDYVDVPDGKKTFTVKFTPTFSMVPKATIYVHYVVNNDLQFEEKTIDFEKEFSNSIDISAPTNAKPSEEVKLRIKTDADSFVGLL
# GVDQSVLLLKSGNDLSQDDIFNSLNKYQTSTPWMNGYGRYPGQTSGLVTLTNANYPYNTERRIFIRPGIGFPRPLFNRVTVTGSLAQNVLTEPQVRKE
# FPENWIFNNFENVGEEGLTLTKKIPDTITSWVVTGFSLNPTSGIALTKSPSKIRVFQPFFVSTNLPYSVKRGEVIAIPVVIFNYLDKTLDADVVMDNS
# DQEYEFTEATNEVLEKAIDEVRRVKRVTIPANSGKSVSFMIRPKSVGFTTLKITATSALAGDTIHQKLKVEPEGVTQFENRAVFINLKDQPEMSQSLN
# AEIPSEVVPQSEFIEFSVVGDLLGPTLQNLDNLVRMPYGCGEQNMVNFVPNILVLKYLEVTGRKLPSVESKARKFLEIGYQRELTYKHDDGSYSAFGK
# SDASGSTWLTAYVMRSFHQAGTYTDIDPKVITAGLDFLVSKQKESGEFPEVGKLFDNANQNPLALTSFVLLAFFENHELIPKYQSAIEKAVRYVAEEA
# DKTDDQYSLAIAAVALQLAKHPQAEKVLAKLESMARNENDRMWWSKTTESTGEDGRVFHWKPRSNDVEITSYVLLALLEKDPAEKALPIIKWLISQRN
# SNGGFSSTQDTVIGLQALTKFAYKTGSGSGTMDIEFSSAGESNNTIKLNPENSLVLQTHVLPKSTRKVDFTAKGTGSAMVQLSYRYNLAQKEKKPSFK
# VTPTVKDTPNQLLVVDICAEYVPLEDADKEKDSNMAVMEIALPSGFVGDDESLSKIQAVDRVKRVETKNSDSTVVVYFDSLTPGDVHCLPLEASKAHA
# VAKQKPASVSLYDYYDTDRKATEYYQVKSSLCDICEGADCGEGCKKD]
#
##gff-version	3
##query	GD22492%20[Drosophila%20simulans] 1 666
2L	Scipio	protein_match	7253440	7254108	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 1 223
2L	Scipio	protein_match	7251839	7252480	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 224 437
2L	Scipio	protein_match	7249948	7250592	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 224 438
2L	Scipio	protein_match	7248693	7249328	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 224 435
2L	Scipio	protein_match	7247155	7247715	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 438 624
2L	Scipio	protein_match	7246965	7247090	1.0	-	0	gene_id=kassiopeia_gene_id403411 GD22492 [Drosophila simulans];Query=GD22492%20[Drosophila%20simulans] 625 666
# protein sequence = [MIRCGLDIFRGCRGRIRYWLSARDCYGSISLMVAIAFALGITPFLVRRNALGETSLEQSWYGFLNAILRWLLLAYCYS
# YINLSNESLIGYFMRNHVSQISTRVHDVGGIIAAVFTFILPLLLRKHFLKSVKNMVQVDTQLERLRCPVDFNTVVGQVVLVILAVVLLDTVLLTTGLV
# CLAKMEVYASWQLTFIFVYELLAISITICMFCLMTRTVQRRITCLHKMSALRRVRKYFISSQVYEALRPLFFLTFLYGLTPFHVVRRKMGESYLKMSC
# FGVFNIFIYICLCGFCYISSLRQGESIVGYFFRTEISTIGDRLQIFNGLIAGAVIYTSAILKRCKLLGTLTILHSLDTNFSNIGIRVKYSRIFRYSLL
# VLIFKLLILGVYFVGVFRLLVSLDVTPSFCVCMTFFLQHSVVSIAICLFCVIAFSFERRLSIINQVLKNLAHQWDTRSLKAVTQKQRSLQCLDSFSMY
# TIVTKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYYVLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRA
# IKKSEKTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL]
#
##gff-version	3
##query	GD22540%20[Drosophila%20simulans] 1 340
2L	Scipio	protein_match	6597679	6597823	1.0	-	0	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 1 48
2L	Scipio	protein_match	6594507	6594630	1.0	-	0	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 1 41
2L	Scipio	protein_match	6592979	6593119	1.0	-	2	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 49 95
2L	Scipio	protein_match	6592792	6592915	1.0	-	2	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 96 137
2L	Scipio	protein_match	6592300	6592639	1.0	-	1	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 138 250
2L	Scipio	protein_match	6592068	6592236	1.0	-	0	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 251 306
2L	Scipio	protein_match	6591914	6592014	1.0	-	2	gene_id=kassiopeia_gene_id403458 GD22540 [Drosophila simulans];Query=GD22540%20[Drosophila%20simulans] 307 340
# protein sequence = [MPTITEDCIDGFQQYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLD
# PRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESILIWYKGTRHETYKHWTDSLDDFFAAKKMMHSKLEFLYLNPTVYKVPGLTPGRGQNIYNCDYNQPP
# PKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNKSNDLPVSMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNY
# LPIRGFPGYFYPYQNSEGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKERIGSVHYELLID]
#
##gff-version	3
##query	GD22632%20[Drosophila%20simulans] 1 249
2L	Scipio	protein_match	5562530	5562584	1.0	-	0	gene_id=kassiopeia_gene_id403544 GD22632 [Drosophila simulans];Query=GD22632%20[Drosophila%20simulans] 1 18
2L	Scipio	protein_match	5560176	5560846	1.0	-	2	gene_id=kassiopeia_gene_id403544 GD22632 [Drosophila simulans];Query=GD22632%20[Drosophila%20simulans] 19 242
2L	Scipio	protein_match	5559256	5559947	1.0	-	2	gene_id=kassiopeia_gene_id403544 GD22632 [Drosophila simulans];Query=GD22632%20[Drosophila%20simulans] 19 249
# protein sequence = [MAKILISALLCVAMFGSMALGSPECPTPNGRFASGEQCDSYTECQDGNPVEKLCPDGLLFHQRTKATGECTYAPYSTC
# KERARLQPANGTEECPRQFGFYPNGDASKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEAYLGFNCPAADSADDSAAAAVDVSPEG
# ELRYYRHPQTCKKYFVCVNGHPRLYNCGKYLAFNSQTKLCDFYNKVPECYALLKEKQRLKAEKQQPHVAQPEA]
#
##gff-version	3
##query	GD22683%20[Drosophila%20simulans] 1 479
2L	Scipio	protein_match	4751275	4752443	1.0	-	0	gene_id=kassiopeia_gene_id403593 GD22683 [Drosophila simulans];Query=GD22683%20[Drosophila%20simulans] 1 390
2L	Scipio	protein_match	4750461	4750555	1.0	-	1	gene_id=kassiopeia_gene_id403593 GD22683 [Drosophila simulans];Query=GD22683%20[Drosophila%20simulans] 391 421
2L	Scipio	protein_match	4750377	4750444	1.0	-	1	gene_id=kassiopeia_gene_id403593 GD22683 [Drosophila simulans];Query=GD22683%20[Drosophila%20simulans] 391 412
2L	Scipio	protein_match	4749119	4749291	1.0	-	2	gene_id=kassiopeia_gene_id403593 GD22683 [Drosophila simulans];Query=GD22683%20[Drosophila%20simulans] 422 479
# protein sequence = [MIKSTTNPQEQRLPRPEDQSPAPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCPMC
# HQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTSAFLARCLICSIYGIHSATQQPNEYKC
# TQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQELLEQQQREMQEQAQQQQVHHHQQD
# QDLAGDQVSLKVPPLTVKLNKNANGGTIVAHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTF
# KTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRSALT
# VHTTKLHPL]
#
##gff-version	3
##query	Acp24A4%20[Drosophila%20simulans] 1 78
2L	Scipio	protein_match	3651672	3651738	1.0	-	0	gene_id=kassiopeia_gene_id403646 Acp24A4 [Drosophila simulans];Query=Acp24A4%20[Drosophila%20simulans] 1 22
2L	Scipio	protein_match	3651447	3651610	1.0	-	2	gene_id=kassiopeia_gene_id403646 Acp24A4 [Drosophila simulans];Query=Acp24A4%20[Drosophila%20simulans] 23 77
2L	Scipio	protein_match	3651123	3651189	1.0	-	0	gene_id=kassiopeia_gene_id403646 Acp24A4 [Drosophila simulans];Query=Acp24A4%20[Drosophila%20simulans] 1 22
2L	Scipio	protein_match	3650889	3651055	1.0	-	2	gene_id=kassiopeia_gene_id403646 Acp24A4 [Drosophila simulans];Query=Acp24A4%20[Drosophila%20simulans] 23 78
# protein sequence = [MKLLILLFVFIALASNSLALKNEICGLPPAANGLCLAYFRRWSYDSQYNVCFPFTYGGCQGNKNSFETQEECMAKCVE]
#
##gff-version	3
##query	GD22739%20[Drosophila%20simulans] 1 111
2L	Scipio	protein_match	3624161	3624227	1.0	-	0	gene_id=kassiopeia_gene_id403649 GD22739 [Drosophila simulans];Query=GD22739%20[Drosophila%20simulans] 1 22
2L	Scipio	protein_match	3623839	3624101	1.0	-	2	gene_id=kassiopeia_gene_id403649 GD22739 [Drosophila simulans];Query=GD22739%20[Drosophila%20simulans] 23 110
2L	Scipio	protein_match	3623246	3623511	1.0	-	2	gene_id=kassiopeia_gene_id403649 GD22739 [Drosophila simulans];Query=GD22739%20[Drosophila%20simulans] 23 111
# protein sequence = [MKFVILLSLMCIGIGYAQQQSEAICRSDPSVVGNCGHKIKGYTYECRINSCKKFRAKACKVTGNFFRSRDACNAKCKD
# TGKPAQSGVFEFFNRTVSQFLQMILSLMSWAGF]
#
##gff-version	3
##query	GD22847%20[Drosophila%20simulans] 1 219
2L	Scipio	protein_match	2248107	2248220	1.0	-	0	gene_id=kassiopeia_gene_id403753 GD22847 [Drosophila simulans];Query=GD22847%20[Drosophila%20simulans] 1 38
2L	Scipio	protein_match	2246468	2246581	1.0	-	0	gene_id=kassiopeia_gene_id403753 GD22847 [Drosophila simulans];Query=GD22847%20[Drosophila%20simulans] 1 38
2L	Scipio	protein_match	2245876	2246418	1.0	-	0	gene_id=kassiopeia_gene_id403753 GD22847 [Drosophila simulans];Query=GD22847%20[Drosophila%20simulans] 39 219
# protein sequence = [MELLSVGPQVLTFYPPYDDRQRRMVTLLNPTDRRVLFKLLLQVTSNAWLNYTVNPNTGRIAPYSSSEIIISLKSFDFN
# TDERYNHHFVIKSMFEPQDHKNGQTILAIFRDVSRRDISSNTLLVRLEAQPFPLDCHGLDSLCDFSKSSVNTELQLRQLYENCANRLEEAPAKQNTPS
# GSRHLSKIVIIGSLTLVVLTAFVQRRLMFETFMDTQYADIHFQ]
#
##gff-version	3
##query	GD22970%20[Drosophila%20simulans] 1 245
2L	Scipio	protein_match	304477	304668	1.0	-	0	gene_id=kassiopeia_gene_id403874 GD22970 [Drosophila simulans];Query=GD22970%20[Drosophila%20simulans] 1 64
2L	Scipio	protein_match	303603	303803	1.0	-	0	gene_id=kassiopeia_gene_id403874 GD22970 [Drosophila simulans];Query=GD22970%20[Drosophila%20simulans] 1 67
2L	Scipio	protein_match	302908	303128	1.0	-	0	gene_id=kassiopeia_gene_id403874 GD22970 [Drosophila simulans];Query=GD22970%20[Drosophila%20simulans] 65 138
2L	Scipio	protein_match	302021	302342	1.0	-	1	gene_id=kassiopeia_gene_id403874 GD22970 [Drosophila simulans];Query=GD22970%20[Drosophila%20simulans] 139 245
# protein sequence = [MAKPKSKSTSKGSTSPGFNKAVQLLLHFTAVLQFNYGVYIFHTLDMPNTVPFAGKFKFLTFICAIIQALYYIVSLVND
# FVGTNELTPKKPPAVRRFKDWLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNIVVFIVLELFISYRSYPKRSQGLAGLAIF
# MGAYLVWIHVVKHYSGVWVYPVLEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN]
#
##gff-version	3
##query	GD22994%20[Drosophila%20simulans] 1 2117
2L	Scipio	protein_match	58959	59028	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1 23
2L	Scipio	protein_match	47182	47260	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1 26
2L	Scipio	protein_match	44315	44871	1.0	-	2	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 24 209
2L	Scipio	protein_match	43595	43791	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 210 275
2L	Scipio	protein_match	41004	43356	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 276 1059
2L	Scipio	protein_match	39331	39377	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1060 1075
2L	Scipio	protein_match	38598	39047	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1076 1225
2L	Scipio	protein_match	36110	36833	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1226 1466
2L	Scipio	protein_match	35738	35891	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1467 1517
2L	Scipio	protein_match	35125	35404	1.0	-	2	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1518 1611
2L	Scipio	protein_match	32404	32490	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1612 1640
2L	Scipio	protein_match	32155	32348	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1641 1704
2L	Scipio	protein_match	31834	32062	1.0	-	2	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1705 1781
2L	Scipio	protein_match	31438	31644	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1782 1850
2L	Scipio	protein_match	30631	31068	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1851 1996
2L	Scipio	protein_match	30342	30540	1.0	-	1	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 1997 2062
2L	Scipio	protein_match	30102	30266	1.0	-	0	gene_id=kassiopeia_gene_id403897 GD22994 [Drosophila simulans];Query=GD22994%20[Drosophila%20simulans] 2063 2117
# protein sequence = [MKYSTSRLNILCLLGLCLLLFKTEPIEAQNKRTSRVTSSRSFGTNVKTDNSNGPSFDCPEEFGYYPHPSDCTQYYVCV
# FGGALLESCTGGLMYSHDLQTCDWPRNVGCELADTSSERNIAQSQVQRQREPHAQHVPSRIRFGAAFSSQGGTQKTATVPPQYHRSPPQVIQAQVQNI
# PPPPPELRVSPNPVITSRGQPKPLIDSQEDIAKLYADAQESLPPVEEEESDRQQRVYRGQPSTVSQVQRDRDGIIHQASINSIPQTGKIGSYAFGTAY
# SKSLQDDQTLELSYNRLDESRRRKRRDLSAQPTKVTEEKYHNDTNCSREVLEHASPTELSDSTETSKTSQERLNDGAPANGRMRKYSSKIRQLKSENA
# MEFDYKEIPGEDSQLMDGYEDEDDVATGESKRRPRQLRPISHTSLKWPVQNYRAIDSPPLPQVSQQTGYSFGSYNPYLTPPNTNPVHNQQPYGNPNYN
# HLPGYHSYVHQQHQLASAGPLSQKKHKLPYTGYNLSLPPPPLEDDFRPIAGSYYEAAGAAQTSPRSPNSKQHHSNAGDLLPYLIQQLKELKEQRKHLQ
# SDNFAYFRLDNQPMSPVPTQAVTPVPTISTTYYSPVDASKLSQQVTPNGQYSTMGGFYNNQKPGKASFNPNYPGKLVSQYSIASNGHDSTTESNYFQY
# NIVANQKMKGVFSTAPPNQIGHSAVKVRPPVTPLQVTQSINVVSAPNLTYKIPNGLQQAPFALLPEGISYASNSTIPESYQTFTKSVSTSATVLSDVP
# TTTPKSKLTNFQFNINEFMANLKESDLSSVNPAVNPLIKYFKELSTDNNGNINLPNPLVNRRPVTGSTSTLNSTTTTTQVDIKPNTPAYKKRIKPDPT
# LPTQSTPTPIRILKGYEHFIKGIQNQLNSRNSSQSTVYNTSTTLIRMPTTTTIKSVDYYDEDYEEDEDILPPSQMPPYMPVSETMAPPRRHLATARPN
# TESPGKGPASFQTGFLEATTTRRPFPTFTQVNQAGAEADVPSFISFPSDIFQELKQRLPKLPEPNAPQSSTKVFTTPRSVRPTSHPRPISSSTEQQPT
# RIEQDNTYDQPTRSPQRAEHVAIQKLDTRASHSSTVTLTTTASPPEVLTYYETLTTPYAPKRGSSDYAYGSAEDNDQRDRLLTEVKSRPHTGSEDFDL
# IANVVGHTDKNTATPPTRSQKTKSTPPHNGSQKPGRSSNTTTHAVTFTQSSTITTTSTFPPTTTKKLTRESPNRVTANPAMHFVSPYKSLENLLHEDR
# QHHHHQLRTTTRPRYTNAPAFSEFLQTTAKSRKNLFMMASVRNSSKDVLATMETGNARNFSVSDAILSTFSPQRPAPSMLRTTTTTTTTTTMKPPPIE
# ITSTEDSTTVSAIIASSAIHISQSPKPARGRSRYTAATLNSLGDSGDEPTTYAPKLRLLGGYDPIPLPKTKPQRVQVIGNQRSLLGGPTSKPHEKYRA
# LEDTFQAKDLSIGSKNQTAEHTLADSLQNSGYITSPNGSSQKFRSPNVLEQLRQFLSGSDSNSNSDETTPSSFAPHTARASRVNNDIKSSIAAAALGP
# STSTYQPSVSAGKTQKFQIGFATNNKNHQLQKTSINHNGPAASASVKCSDSTLNAKCNEISSRNNNRNRGSAMYSNQDRDLISTPNRGTHPPRTRPTL
# KPSGIIVSKAQEFVDIYRYPPSRPDPIYPQPTPDKTAAKCRKDVCLLPDCYCGGKDIPGGLNASETPQFVLMTFDDAVNTINIDLYEELFNNKSRKNP
# NGCSWRGTFYLSHEWTDYVMVQDLYSQGHEMASHTVSIPQIVLLTFDDSVNDLNKQLYTDLFEKGRVNPNGCPITATFYVSHEWTDYSQVQNLYADGH
# EMASHTVSHSFGEQFSQKKWTREIAGQREILAAYGGVKMSDVRGMRAPFLSVGGNKMYKMLYDSNFTYDSSMPVYENRPPSWPYTLDYKIFHDCMIPP
# CPTRSYPGVWQVPMVMWQDLNGGRCSMGDACSNPSDADGVTKMIMKNFERHYTTNRAPFGLFYHAAWFTQPHHKEGFIKFLDAINAMQDVWIITNWQA
# LQWVRDPTPISRINSFQPFQCDYSDRPKRCNNPKVCNLWHKSGVRYMKTCQPCPDIYPWTGKSGIRSSRIDNEVEEPAA]
#
##gff-version	3
##query	GD23001%20[Drosophila%20simulans] 1 381
2L	Scipio	protein_match	110368	110410	1.0	+	0	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 1 14
2L	Scipio	protein_match	110992	111069	1.0	+	2	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 15 40
2L	Scipio	protein_match	111327	111449	1.0	+	2	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 41 81
2L	Scipio	protein_match	112143	112255	1.0	+	2	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 82 119
2L	Scipio	protein_match	113081	113193	1.0	+	2	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 82 119
2L	Scipio	protein_match	113867	114546	1.0	+	0	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 120 346
2L	Scipio	protein_match	114611	114716	1.0	+	1	gene_id=kassiopeia_gene_id403904 GD23001 [Drosophila simulans];Query=GD23001%20[Drosophila%20simulans] 347 381
# protein sequence = [MISAECHSEEYTPNDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDD
# SSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQ
# GSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTKV
# DRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKSQKELLDIIRKNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWE
# EAKPLETDN]
#
##gff-version	3
##query	GD23213%20[Drosophila%20simulans] 1 398
2L	Scipio	protein_match	3106569	3106723	1.0	+	0	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 1 52
2L	Scipio	protein_match	3109630	3109772	1.0	+	1	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 53 99
2L	Scipio	protein_match	3110127	3110296	1.0	+	1	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 53 108
2L	Scipio	protein_match	3110359	3110713	1.0	+	2	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 109 227
2L	Scipio	protein_match	3110779	3111128	1.0	+	1	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 228 343
2L	Scipio	protein_match	3111188	3111351	1.0	+	2	gene_id=kassiopeia_gene_id404107 GD23213 [Drosophila simulans];Query=GD23213%20[Drosophila%20simulans] 344 398
# protein sequence = [MSTAFFTVIAVIVCILFRILNVHSQPLKPSVWCLDAHFLDCLYKIAPVLREPYVPPRLWGFSGHVQTVLHSIVGRVRC
# PWPLGERVYMSLKDGSTLTYDLYQPLNEQEDDITVAICPGIANSSESVYIRTFVHLAQCNGYRCAVLNHIGALRSVQVTSTRIFTYGHTEDFAAMVEH
# LHQKYRQSRIVAVGFSLGGNLVTKYMGEDQKTKPNKVIGGISICQGYNAVEGTKWLLNWQNFRRFYLYIMTENVKSIILRHRHVLLSDEVKARHNLNE
# REIIAAATLPELDEAYTRRVYNFPSTQELYKWSSSLFYFDTIKKPMIFINAKDDPLIPEDLLHPIKEYATTRQNTAYVEVAHGGHLGFYEGGFLYPNP
# VTWLDRTLVAMVGSLVMMQEVGKVAP]
#
##gff-version	3
##query	FBpp0221830 1 1201
2L	Scipio	protein_match	6523828	6524076	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 1 83
2L	Scipio	protein_match	6524138	6524239	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 84 117
2L	Scipio	protein_match	6524740	6525093	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 118 235
2L	Scipio	protein_match	6525166	6525267	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 236 269
2L	Scipio	protein_match	6525337	6525504	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 270 325
2L	Scipio	protein_match	6525562	6525681	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 326 365
2L	Scipio	protein_match	6526163	6526291	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 366 408
2L	Scipio	protein_match	6526857	6527774	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 409 714
2L	Scipio	protein_match	6527871	6528496	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 715 923
2L	Scipio	protein_match	6528563	6528765	1.0	+	1	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 924 990
2L	Scipio	protein_match	6529007	6529158	1.0	+	1	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 924 973
2L	Scipio	protein_match	6529180	6529287	1.0	+	2	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 991 1026
2L	Scipio	protein_match	6529408	6529727	1.0	+	2	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 1027 1133
2L	Scipio	protein_match	6529783	6529899	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 1134 1172
2L	Scipio	protein_match	6529961	6530047	1.0	+	0	gene_id=kassiopeia_gene_id404310 FBpp0221830;Query=FBpp0221830 1173 1201
# protein sequence = [MWNMMCDVMPTISEDSISQRSSQFSGEDANFEQLMVSMLDERDKLMDSLREAQERLNETENKLRDVEKERDSLQRQIN
# ANLPQEFATLTKELTQARETLLERDEEIGELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAAAQSGVSSEVEVLKALKSLFEHHKALDEKVRER
# LRLSIEKNNMMEEELSSAKEELAQYKAGVVPAGVGSGSGAGSAASTAGGGGAENGLKEKMAGVGGSGGVNGEANELNDYAAKTHELQTIIEKQTSELS
# QWQRRVSDLNNKISELEENMSRVQKEHCKAQDQCSKLQRDLRENVAQKEDQEERITTLEKRYLNAQRESTSLHDLNEKLEQELRHKEAQLKLHEEKIG
# AIEEKLELSEQKLAQHAKLQPDMEEQLKARMEALTKAQERHGSAEDRIRGLETNLDEKTNEVVRLNQRLKMNEEHNLRLSSTVDKLLSESNERLQVHL
# KERMHALDEKNALTQELEKARKVAEELHHEKSEIMKELSKTRLEIENFKRQLLQQEIAYNIQQTEALTRSLSPSSVVDPSGAFSRSNSHASFETHSLR
# RQSKQRLSEENALVRSMAEQEWEKLQQAAHAQQQAYELASAADCDDSDVLYAAATDMMSPSGHTDAQTLAMMLQEQLDAINNEIRLIQEEKQSTEARA
# EELESRVGSLEHVNLLARGRSMDRQSPPMSGRSTPNSPQRDFMQKYHTLNLPVLSSDASREELHGGMSTTGDSSSGGAASPLTARSMRLERVAQALAH
# SQEELRRRSIGLNPNASMPPNHTGGHMPLSSHSYGLSPLSSRYGSQESLRHYNTMGSMSMLQAPTSGVSREAAAAAVQKKKGIKSSLGRFFSKKEKVK
# GVKDTLPDGSPSMMSIGNLSIGLSEVDSNYDAMSMTGGMMPRIASSQGSKISSVDYGRQKKEHDYRNDLLGEAMKAGTPFALWNGPTIVAWLELWVGM
# PAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPQTSRTTLAFGDMNHEWIGNYWLPGLGLPQYRTTFMECLVDA
# RMLDHLTKKDLRGQLKMVDSFHRTSLQYGISMLKRLNYDRTELEHRRKMSENGLCDVLVWSNERVIRWVGSIGLKEYANNLLESGVHGGLMALDEGFD
# ANAMGLALQIPTQNAQARQILDTEFNNLLQIATDRRPENEQRSAS]
#
##gff-version	3
##query	GD23455%20[Drosophila%20simulans] 1 510
2L	Scipio	protein_match	6972248	6972540	1.0	+	0	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 1 98
2L	Scipio	protein_match	6972608	6972755	1.0	+	1	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 99 147
2L	Scipio	protein_match	6973061	6973220	1.0	+	0	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 148 200
2L	Scipio	protein_match	6973388	6973550	1.0	+	0	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 148 201
2L	Scipio	protein_match	6973659	6973696	1.0	+	2	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 202 214
2L	Scipio	protein_match	6973754	6973868	1.0	+	0	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 215 252
2L	Scipio	protein_match	6973924	6974084	1.0	+	2	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 253 306
2L	Scipio	protein_match	6974494	6974953	1.0	+	0	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 307 459
2L	Scipio	protein_match	6975017	6975168	1.0	+	2	gene_id=kassiopeia_gene_id404337 GD23455 [Drosophila simulans];Query=GD23455%20[Drosophila%20simulans] 460 510
# protein sequence = [MSVVRFLVTRQALAALTRPRTLNIIQNPAQIAFASTLCNQNSNHIAQDLTKSSANLSLMQTMGHKRFGHQEEKTPNVT
# KYFELFILSLFFISVLDWGKVKRLLLPKVDADAGQRPSSAAGVNGEDKSSESESEDSDDEDARSDLHPPIIEYENRIRQFSTPDKVFRYFATIQVPVA
# DDRHEVYMTPTDFLTSMTPGMKQPDGLGLDQYRRYDPKSVGEQLNLHLEKNSIFYKLGSYGLITFSDYIFLLTVLSISRRHFEIAFRMFDLNGDGDVD
# CEEFEMVATLVRQQTSMGTRHRDHANTGNTFKGVNSALITYFFGPNMDEKLTIEKFLDFQEQLQKEILSLEFERKEPNDEGNITEADFAELLLAYAGY
# PLKKKQKKLKRVKRRFRDHGKGISKQDYLDFFHFLNNINDVDTALTFYHIAGASIDQQTLQHVAKTVAMVNLSDHVVDVVFTIFDENNDNQLSNKEFI
# SVMKNRVQRGLEKPKDTGFLKMMRSVFKCAKETKPVLLDI]
#
##gff-version	3
##query	GD23708%20[Drosophila%20simulans] 1 1080
2L	Scipio	protein_match	10252012	10252122	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 1 37
2L	Scipio	protein_match	10252577	10252947	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 38 161
2L	Scipio	protein_match	10253009	10253214	1.0	+	1	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 162 229
2L	Scipio	protein_match	10253272	10253408	1.0	+	2	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 230 275
2L	Scipio	protein_match	10253512	10253645	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 276 320
2L	Scipio	protein_match	10253793	10253926	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 276 320
2L	Scipio	protein_match	10254013	10254653	1.0	+	1	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 321 533
2L	Scipio	protein_match	10254714	10254934	1.0	+	2	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 534 607
2L	Scipio	protein_match	10255003	10255414	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 608 744
2L	Scipio	protein_match	10255477	10255919	1.0	+	2	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 745 892
2L	Scipio	protein_match	10255978	10256541	1.0	+	0	gene_id=kassiopeia_gene_id404582 GD23708 [Drosophila simulans];Query=GD23708%20[Drosophila%20simulans] 893 1080
# protein sequence = [MSAKTSVWLVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSETRIQK
# AGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWWKEQKPKVQDAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVG
# WQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGFCFDILCSDAPIIDGKHSPDNNVKE
# RIDTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWT
# GYFTSRPTLKRFERDGNHFLQVCKQLSALAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDN
# VKDKSAKYVFEFKTCALLNITSCPVSEGNDRFALTLYNPLAHTVDEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFLATN
# IPPLGYRTYYVEKLDSTEDNTRTKALPKRTSSVTVIGNSHIKLGFDTNGFLSEVTADGLTRLVSQEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKIH
# FATDQVEIQVYKGDLVQEVHQKFNDWISQVVRVYNKDSFAEFEWLVGPIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKIN
# EAVAGNYYPITTKIDLEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNETEFGDGLIARGKHHLFFGKSTDREGVSLKGIERLT
# QLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTVEPWHENQLLVRFEHIMENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDG
# NAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIKRETDSRQDKKDEGRSSKSTEGPYNSFKADSSN
# QEYIIELSPMEIRTFIVYLTPA]
#
##gff-version	3
##query	GD23750%20[Drosophila%20simulans] 1 844
2L	Scipio	protein_match	10802569	10802667	1.0	+	0	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 1 33
2L	Scipio	protein_match	10802731	10802893	1.0	+	0	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 34 87
2L	Scipio	protein_match	10802958	10803451	1.0	+	2	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 88 252
2L	Scipio	protein_match	10803511	10803683	1.0	+	0	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 253 310
2L	Scipio	protein_match	10803752	10804064	1.0	+	1	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 311 414
2L	Scipio	protein_match	10804282	10804561	1.0	+	1	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 311 403
2L	Scipio	protein_match	10804586	10805243	1.0	+	0	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 415 633
2L	Scipio	protein_match	10805309	10805548	1.0	+	2	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 634 713
2L	Scipio	protein_match	10805605	10805769	1.0	+	2	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 714 768
2L	Scipio	protein_match	10805825	10806051	1.0	+	2	gene_id=kassiopeia_gene_id404624 GD23750 [Drosophila simulans];Query=GD23750%20[Drosophila%20simulans] 769 844
# protein sequence = [MTLPQAQLDFFTTATSMLEWHYNLERNKPGLLELTGVSQHGRATMSGLNDYDYQTLSFLKSDATHNLQQMRTVTKSAI
# PNEILEHFKHIKCHCTMGLFPEIGRAWLTIDSEIYIWTFNQTRDVAYYDGLSHLIVSVGLVKPKPGVFVQDVKYLLLLTTPIEVIVLGVTFGEGSYNE
# MQLMNRPVFVIATDNVSISVIKGTDDGRIFLGGRDGCLYEIYYQAESSWFGKRCKKINLSQGLVSYMVPSFLKVFSEVDPIEHIEIDNSRKLLYVLTE
# KGAIEAWDISTSYTTARRLGRITQNDITNQAVSLITTVDPSIFKCVKAICPLTADDAGKLHLVAVTQCGVRLFFSTTSLNVRQQFGPAVPCSPGENTG
# FGQPAVQPPLSPNAEAPNGLYLLHVRLPPGYTPNATTNKPKQVHAAHYTEGTMLMITTQQHEQDLLWSLSSAPSVNFTYLVESTALESLDGVVWGLAE
# VYEPSSPLRKSPLNSARHSRKVALLTNQGTHIIEVLKMVDVLRQILMSCNGPHHEEVKMFFQSQNQREACVTALLLATSDTYRGSNIALWAAQAFMLY
# GGEPCYQHQKFQNASNRNMANQTLGPNTTNVRERQPMFMSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQAAVSNENSPIVFSAKHDGLYTYVSR
# MLHSVWQMRCVNEQFCSNLSQSDCALLLSDLRSLRSFLEVHSVHDISSTTTRVSFDNHLDRTNSYNTIMMGNTLLPIPEQRVLSEQAQVEETRSLSAL
# NLFVTKHACEVISLWNILNSHSFQLICVQLSPEQQKLLTCSTFRDLLITRSEVCAFLIISLINLYLKDAAGGIRCVQELT]
#
##gff-version	3
##query	GD23825%20[Drosophila%20simulans] 1 1076
2L	Scipio	protein_match	11952687	11953127	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 1 147
2L	Scipio	protein_match	11954608	11954794	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 148 209
2L	Scipio	protein_match	11959736	11959928	1.0	+	2	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 210 274
2L	Scipio	protein_match	11960312	11960717	1.0	+	1	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 275 409
2L	Scipio	protein_match	11961765	11962066	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 410 510
2L	Scipio	protein_match	11963374	11963527	1.0	+	1	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 511 561
2L	Scipio	protein_match	11966631	11966740	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 562 598
2L	Scipio	protein_match	11966804	11966948	1.0	+	1	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 599 646
2L	Scipio	protein_match	11967016	11967224	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 647 716
2L	Scipio	protein_match	11968095	11968344	1.0	+	1	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 717 799
2L	Scipio	protein_match	11968403	11968586	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 800 860
2L	Scipio	protein_match	11968886	11969012	1.0	+	0	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 800 841
2L	Scipio	protein_match	11969151	11969797	1.0	+	2	gene_id=kassiopeia_gene_id404698 GD23825 [Drosophila simulans];Query=GD23825%20[Drosophila%20simulans] 861 1076
# protein sequence = [MKCWHNVVRRRKKKPTAAAEGSKEAHGGVAGPRDRDAICQRQQQVDTYTWLTTQAVPLLWLHLLLLVAFAKHAAAATT
# IATNPEATTTTVSNYTVTTTALSSSTTTTSTGSAPASSSAADKFAGNWAILEDSFRNIVRIGDGNTVTRTSIEQSLVTIHDIATENLGTLCISTLYRP
# LQVPINSERYESSRQKTDLAASILQEVGIIRHGGLSDALAKGLLTDDFITGARILALNLTNGAVQSYVWWVKGAAAEIQRYDEDGLQIGKKPAGSYPW
# FDDETSSPTLRSPKFAPSPPNNYYKGWWTYPYFSCSQSRWLVSYSIAIPPIGRHGLRGFISIDIDVSTLRVNQCEAEPYPFGSRRQKMQQLQTHNRLG
# ARRTSFLGNRMGAIDESTINDLQAFHSSHKCHRTSMVCDYRQPSAETPTVTGGKLLTTLTGSSSWTRGSYQCLCRGGFYSLRHPDGFNGTIMEIAWQE
# QQDNISNYYSEVFKCLPCAPGCDTCTGPEPCLANYHWPFRISLLTISIGCACGTFVLAGYLFRHRRVKVFKVASPIFLMITLIGCAIMYLEMVAIFPY
# LDTTWCIATKWTRHMGFCITYTSLLMKTWRVSLTYRVKSAHKIKLNDQQLLQWMVPILLVMLIYLGTWTISATPTAEVILDQSQLKFKQCSYNWWDHS
# LAIGEVFFLAWGIRVCYNVRNAESLYNEARLISYAIYNIALVNIAMVVFHVMLFPNAGPDYKYMLGFVRTQLSTTTTIALVFGPKILRVLKGQGDKWD
# QKAKVRSITASFSLNGVGLVPEESPDLYQENEELKEQVQKLAHQIEFMKTVHMQMNNRHLKPKPGGYFTITSTSFQAPYSKNTVSTAQTQTGKMKNSQ
# RSVKDCSIEIDRGQGRTTLVDDAIEFNFHLADTEEGMIVQEDERPEQDKEEEALIAQFRRLFAPILDDSLNLYYQLNDLDDTEHVRIHQTVAQMNDLT
# SSEEETMVTQVNSPSPPPVCVELLLPISSDSSTASSSLYAIHTPSPAHPSGVLLVPQNLESPLLSGSDAITITEQVQLHNPPHHLQLFEDENNTSCSL
# SSNLTDSKTLDGRTPIVV]
#
##gff-version	3
##query	GD24028%20[Drosophila%20simulans] 1 351
2L	Scipio	protein_match	15635962	15636171	1.0	+	0	gene_id=kassiopeia_gene_id404895 GD24028 [Drosophila simulans];Query=GD24028%20[Drosophila%20simulans] 1 70
2L	Scipio	protein_match	15636233	15636952	1.0	+	0	gene_id=kassiopeia_gene_id404895 GD24028 [Drosophila simulans];Query=GD24028%20[Drosophila%20simulans] 71 310
2L	Scipio	protein_match	15637125	15637192	1.0	+	0	gene_id=kassiopeia_gene_id404895 GD24028 [Drosophila simulans];Query=GD24028%20[Drosophila%20simulans] 311 333
2L	Scipio	protein_match	15638182	15638261	1.0	+	0	gene_id=kassiopeia_gene_id404895 GD24028 [Drosophila simulans];Query=GD24028%20[Drosophila%20simulans] 311 337
2L	Scipio	protein_match	15638941	15638995	1.0	+	1	gene_id=kassiopeia_gene_id404895 GD24028 [Drosophila simulans];Query=GD24028%20[Drosophila%20simulans] 334 351
# protein sequence = [MDRLSILLLLLGISRSQALFCGGSMAKECVQRNRCRIGTETGRPIIQYRGLINGNDGCESGQTCCPKTEILQFPVQVD
# NQPIPADCGYANHQGLGFTITNPMDIAQDGELPWMVALLDSRSHLPIGGGSLITRDVVLTSSTKTYEVPETYLMVRAGEWDFNSDSEQRAHEDVAIRK
# IVRHANRSVENGANNAALLFLARPLKLDHHINLICLPPPNRKFIHNRCIVSGWGKKTALDNSYMNVLKKIDVPLVDRSVCQKQLQGPYGKDFILDNSL
# ICAGGEPGKDSCKGDGGAPLACPLQSDPNRYELVGIVWAQEMLSKDQFRLENLFQMADLLLANIKLGHQQLDTLSSY]
#
##gff-version	3
##query	GD24041%20[Drosophila%20simulans] 1 2537
2L	Scipio	protein_match	15879422	15879762	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1 114
2L	Scipio	protein_match	15880672	15881945	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 115 538
2L	Scipio	protein_match	15882016	15882241	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 539 614
2L	Scipio	protein_match	15882398	15882503	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 615 649
2L	Scipio	protein_match	15882755	15882894	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 650 696
2L	Scipio	protein_match	15883114	15883220	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 697 731
2L	Scipio	protein_match	15883567	15883719	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 732 782
2L	Scipio	protein_match	15884115	15884296	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 783 843
2L	Scipio	protein_match	15884382	15884901	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 844 1016
2L	Scipio	protein_match	15884955	15885180	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1017 1092
2L	Scipio	protein_match	15885247	15885457	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1093 1162
2L	Scipio	protein_match	15885520	15885729	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1163 1232
2L	Scipio	protein_match	15885788	15885906	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1233 1272
2L	Scipio	protein_match	15886013	15886071	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1273 1291
2L	Scipio	protein_match	15886362	15886473	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1292 1329
2L	Scipio	protein_match	15887039	15887156	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1292 1331
2L	Scipio	protein_match	15887600	15887693	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1332 1362
2L	Scipio	protein_match	15887844	15888010	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1363 1418
2L	Scipio	protein_match	15888102	15888189	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1419 1447
2L	Scipio	protein_match	15888785	15888892	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1448 1483
2L	Scipio	protein_match	15890457	15890564	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1484 1519
2L	Scipio	protein_match	15891427	15891479	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1520 1537
2L	Scipio	protein_match	15891542	15891688	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1538 1586
2L	Scipio	protein_match	15891748	15892219	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1587 1743
2L	Scipio	protein_match	15892286	15892369	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1744 1771
2L	Scipio	protein_match	15892429	15892494	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1772 1793
2L	Scipio	protein_match	15892550	15892738	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1794 1856
2L	Scipio	protein_match	15892798	15893046	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1857 1939
2L	Scipio	protein_match	15893101	15893760	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 1940 2159
2L	Scipio	protein_match	15893847	15894280	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 2160 2304
2L	Scipio	protein_match	15894773	15894813	1.0	+	1	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 2305 2317
2L	Scipio	protein_match	15897668	15897798	1.0	+	2	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 2318 2361
2L	Scipio	protein_match	15897865	15898392	1.0	+	0	gene_id=kassiopeia_gene_id404908 GD24041 [Drosophila simulans];Query=GD24041%20[Drosophila%20simulans] 2362 2537
# protein sequence = [MGGGELVNCIAYDDNTLVIERKPSPSSPSTSRRYLKAETPTRGSRKYNRKSSAKSDLEVVVVKPEHHHQHRSPTITLP
# VPANPLTTSASAGSSPTGAGLGAGLGTASGTVLQQSCSALDPPEDPNQPSGTRRRPTSTELALSNVTSQIVNNATYKLDFKQRRHKSNNGGSESGSLT
# GIATGPATSPAAAGPTSSSGKRRKSSCTSCGGGGISAPPPRLTPEEAWQLQPQNSVTSAGSTNSSFSSGGGRDDNSSYSAVGGDSSSSNSCNCDITGD
# NSTLHGFGVGDVCSFIADCDDNSEDDDGDPNNQDLSSQTLRTAAIVAAVAAAAKEQAQEQSLADCESFSDRRQDADEDVRIIQDSCGGNNDSLEDVGE
# VDDNADVVVRKNSRNRPSIRRTCRITEEDDDEDENADYGDFDREDQELDDEEPEGTTIDIDEQEQQHDQGDSAEEEDDDEDVDEYFEEEEDDTQAFSP
# FYSSSAELIDNFGGGAGKFFNIMDFERGASGGGGFSPNGNGGPGSGDVSRTARYDSGEGDLGGGNNIMGIDSMGIANIPETMNGTTIGPSGAGGQKGG
# AAAGAAGQKRQQRRGKPQPDRPQRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKVEYVFLVIFTAECVM
# KILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAII
# GLELFSGKLHKACRDEITGEYEENIRPCGVGYQCPPGYKCYGGWDGPNDGITNFDNFGLAMLTVFQCVTLEGWTDVLYSIQDAMGSDWQWMYFISMVI
# LGAFFVMNLILGVLSGEFSKERNKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIEPDAVGGLISDGKGKQPNEMDSTENLGEEMPEVQMTESRWR
# KMKKDFDRVNRRMRRACRKAVKSQAFYWLIIVLVFLNTGVLATEHYGQLDWLDNFQEYTNVFFIGLFTCEMLLKMYSLGFQGYFVSLFNRFDCFVVIG
# SITETLLTNTGMMPPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFDGKEEKYRMNFDCFWQA
# LLTVFQIMTGEDWNAVMYVGINAYGGVSSYGALACIYFIILFICGNYILLNVFLAIAVDNLADADSLSEVEKEEEPHDESAQKKSHSPTPTIDGMDDH
# LSIDIDMEQQELDDEDKMDHETLSDEEVREMCEEEEEVDEEGMITARPRRMSEVNTATKILPIPPGTSFFLFSQTNSNFGNIILCCIMFSSAMLAAEN
# PLKANDDLNKVLNKFDYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISLVSSSNAISVVKILRVLRVLRPLRAINRAKGLKHVV
# QCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKYVVKCVVVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFKCTDGSKMTQDECYGTYLVYDDGDV
# HKPRLREREWSNNRFHFDDVAKGMLTLFTVSTFEGWPGLLYVSIDSNKENGGPIHNFRPIVAAYYIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKN
# CDLDKNQRNCIEFALKAKPVRRYIPKHGIQYKVWWFVTSSSFEYTIFILIMINTVTLAMKFYNQPLWYTELLDALNMIFTAVFALEFVFKLAAFRFKN
# YFGDAWNVFDFIIVLGSFIDIVYSEIKSKDTSQIAECDIVEGCKSTKKSAGSNLISINFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALL
# IVLLFFIYAVVGMQVFGKIALDGNNAITANNNFQTFQQAVLVLFRSATGEAWQEIMMSCSAQPDVKCDMNSDTPGEPCGSSIAYPYFISFYVLCSFLI
# INLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAV
# VRTSLSIKTDGNIDDANSELRATIKQIWKRTNPKLLDQVVPPPGNDDEVTVGKFYATYLIQDYFRRFKKRKEQEGKEGHPDSNTVTLQAGLRTLHEVS
# PALKRAISGNLDELDQEPEPMHRRHHTLFGSVWSSIRRHGNGTFRRSAKATASQSNGALAIGGSASAALGVGGSSLVLGSVDPAGGDYLYDTLNRSVA
# DGVNNITRNIMQARLAAAGKLQDELQGAGSGGELRTFGESISMRPLAKNGGGAATVAGTLPPEANAINYDNRNRGILLHPYNNVYAPNGALPGHERMI
# QSTPASPYDQRRLPTSSDMNGLAESLIGGVLAAEGLGKYCDSEFVGTAAREMREALDMTPEEMNLAAHQILSNEHSLSLIGSSNGSIFGGSAGGLGGA
# GSGGGLGGSSSIRNAFGGSGSGPSSLSPQHQPYSGTLNSPPIPDNRLRRVATVTTTNNNNKSQVSQNNSSSLNVRANANSQMNMSPTAQPVQQQSPQR
# GQGNPTYSS]
#
##gff-version	3
##query	GD24080%20[Drosophila%20simulans] 1 437
2L	Scipio	protein_match	16469638	16469841	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 1 68
2L	Scipio	protein_match	16470112	16470255	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 69 116
2L	Scipio	protein_match	16470424	16470567	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 117 164
2L	Scipio	protein_match	16471402	16471782	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 165 291
2L	Scipio	protein_match	16471856	16471919	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 292 312
2L	Scipio	protein_match	16471988	16472086	1.0	+	2	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 313 345
2L	Scipio	protein_match	16472288	16472391	1.0	+	2	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 346 380
2L	Scipio	protein_match	16473232	16473335	1.0	+	2	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 346 380
2L	Scipio	protein_match	16473718	16473821	1.0	+	2	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 346 380
2L	Scipio	protein_match	16474469	16474636	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 381 436
2L	Scipio	protein_match	16478747	16478749	1.0	+	0	gene_id=kassiopeia_gene_id404946 GD24080 [Drosophila simulans];Query=GD24080%20[Drosophila%20simulans] 437 437
# protein sequence = [MPKPVANQEDEDPTPYLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEKVE
# KVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTRDLKKDLLQQVNPPKYEKAEDMSNLTYLNDASVLHNLRQRYYNKLIYTYSGLFCVAINP
# YKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPVL
# EAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVAGVKDICLLTDNIYDYHIVSQGKVTVASIDD
# AEEFSLTDSISYVLLAKPKKNLFSNYVYVDMCFLSDNIYDYYNVSQGKVTVPNMDDGEEFQLADG]
#
##gff-version	3
##query	GD24117%20[Drosophila%20simulans] 1 90
2L	Scipio	protein_match	17260575	17260638	1.0	+	0	gene_id=kassiopeia_gene_id404981 GD24117 [Drosophila simulans];Query=GD24117%20[Drosophila%20simulans] 1 21
2L	Scipio	protein_match	17265672	17265738	1.0	+	0	gene_id=kassiopeia_gene_id404981 GD24117 [Drosophila simulans];Query=GD24117%20[Drosophila%20simulans] 1 22
2L	Scipio	protein_match	17278959	17279022	1.0	+	0	gene_id=kassiopeia_gene_id404981 GD24117 [Drosophila simulans];Query=GD24117%20[Drosophila%20simulans] 1 21
2L	Scipio	protein_match	17283228	17283291	1.0	+	0	gene_id=kassiopeia_gene_id404981 GD24117 [Drosophila simulans];Query=GD24117%20[Drosophila%20simulans] 1 21
2L	Scipio	protein_match	17292022	17292227	1.0	+	2	gene_id=kassiopeia_gene_id404981 GD24117 [Drosophila simulans];Query=GD24117%20[Drosophila%20simulans] 22 90
# protein sequence = [MILTVMMMMVMMMVMVMVSLKCNSQTHKLAHVENAMQMRHPLSYAVHGHIGEILGCTGYGRIPGPCSSFNPLGQESRT
# GQAAQDQQAVSM]
#
##gff-version	3
##query	alpha%20methyl%20dopa%2Dresistant%20[Drosophila%20simulans] 1 510
2L	Scipio	protein_match	18806716	18806795	1.0	+	0	gene_id=kassiopeia_gene_id405048 alpha methyl dopa-resistant [Drosophila simulans];Query=alpha%20methyl%20dopa%2Dresistant%20[Drosophila%20simulans] 1 27
2L	Scipio	protein_match	18806857	18807091	1.0	+	1	gene_id=kassiopeia_gene_id405048 alpha methyl dopa-resistant [Drosophila simulans];Query=alpha%20methyl%20dopa%2Dresistant%20[Drosophila%20simulans] 28 105
2L	Scipio	protein_match	18808391	18808676	1.0	+	1	gene_id=kassiopeia_gene_id405048 alpha methyl dopa-resistant [Drosophila simulans];Query=alpha%20methyl%20dopa%2Dresistant%20[Drosophila%20simulans] 28 122
2L	Scipio	protein_match	18809199	18810413	1.0	+	0	gene_id=kassiopeia_gene_id405048 alpha methyl dopa-resistant [Drosophila simulans];Query=alpha%20methyl%20dopa%2Dresistant%20[Drosophila%20simulans] 106 510
# protein sequence = [MDFDEFREFGHASIEFLINYLSGIRERDVLPSTAPYAVINQLPKEIPEQPDHWREVLKDLENIILPGLTHWQSPYFNA
# FYPSSSSAGSIIGELLIAGIGVLGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVASYRESHPELSE
# SEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAY
# AGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAE
# GLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCFRPKGDNDITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMDTKASDIDFAWQEIESQ
# LTDLQAEQSLVARKSGNVGDLAQHFQIHLSTENATHEKSQ]
#
##gff-version	3
##query	GD25017%20[Drosophila%20simulans] 1 998
2R	Scipio	protein_match	18240596	18241027	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 1 144
2R	Scipio	protein_match	18233655	18233750	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 145 176
2R	Scipio	protein_match	18223682	18223811	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 177 219
2R	Scipio	protein_match	18222884	18223146	1.0	-	2	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 220 307
2R	Scipio	protein_match	18222084	18222188	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 308 342
2R	Scipio	protein_match	18215646	18215788	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 343 390
2R	Scipio	protein_match	18215433	18215485	1.0	-	1	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 391 407
2R	Scipio	protein_match	18214556	18214611	1.0	-	1	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 391 408
2R	Scipio	protein_match	18213312	18213438	1.0	-	2	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 409 451
2R	Scipio	protein_match	18211840	18212004	1.0	-	1	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 452 506
2R	Scipio	protein_match	18211548	18211779	1.0	-	1	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 507 583
2R	Scipio	protein_match	18211288	18211367	1.0	-	0	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 584 610
2R	Scipio	protein_match	18209877	18211041	1.0	-	1	gene_id=kassiopeia_gene_id405836 GD25017 [Drosophila simulans];Query=GD25017%20[Drosophila%20simulans] 611 998
# protein sequence = [MTPEQLQSVFHVDTHDAVPHYELVQLQHHENNHNRRRRSIGAGPKVNAALPPHHVKKDLSKNAYYSELKHEALASGGN
# HLFAPEVSAIKSHNVSFSAFGQHLNLSLRATQGLFKGAPHQLRMWTVGSEPNATHGLDLQEIAHEQHNSNDVGEVFQDEKNMAAILMRRHMETGDLIM
# EGSIGHDLVIKPLPHELSPNPEESHHIIYKREASAAEDQLSDFAFMEPDDLLASEKLERLQRRQRRSRRSAPSSPDFEDLNDEDEGALDSEPQVAESR
# TRSRRQAPYIIYPEVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLKGPRIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKY
# LFRERRLPVYDIAVAITKLDMCRRTSAYGECNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGA
# QRCRWEDGYIMSDLRHTERGFRWSACTVQSFHHFLNGDTATCLHNAPHEDSALGRSLPGTLLSLDAQCRRDRGTYACFKDERVCAQLFCFDAQTGYCV
# AYRPAAEGSACGNGYHCLDGRCTPLPSNIIPDYGHNYRLVYNKIDNKKDSAEDIESSSEETESQEDETESVEDQDEGTTSSEEQEANQEDNKIEQSSA
# AGVAAAQSTTTARSTTTTTVRTTTTAKPKSKSFGYLHRSLPERQWMQDNGVLVTTRISSSVSSSSSGEAATASTRRPTTTTTTQTPNLFQIYTHELRK
# QIEYYLHMLQTQQHATKFQPEQQQQQSQQQQSIVEIPLVQKRLTNYSVTSSSSSSSSSNSNGAKQQPPSNKDENQRQQQQQQQAQQQLQDGLPDEENE
# ATAGLASNEAIERQKSKFPTTPTAATSAAQKSATPATPATSATSARPTPTTAKPITTSSFLDAYFKKLQALHDAGSASSSSSTATSVSSSVSSATSSK
# QQHPQQQQQQQQQVQQHADGSHFLKRTPQRSSLQCIQT]
#
##gff-version	3
##query	GD25280%20[Drosophila%20simulans] 1 70
2R	Scipio	protein_match	14919122	14919174	1.0	-	0	gene_id=kassiopeia_gene_id406095 GD25280 [Drosophila simulans];Query=GD25280%20[Drosophila%20simulans] 1 18
2R	Scipio	protein_match	14918759	14918799	1.0	-	0	gene_id=kassiopeia_gene_id406095 GD25280 [Drosophila simulans];Query=GD25280%20[Drosophila%20simulans] 1 14
2R	Scipio	protein_match	14915768	14915924	1.0	-	1	gene_id=kassiopeia_gene_id406095 GD25280 [Drosophila simulans];Query=GD25280%20[Drosophila%20simulans] 19 70
# protein sequence = [MRRHKEKKQKDEQPQRMCRRRCGCHPDARMPGLRFSGSQPRPEPSQDWRSNTTRFYGHPQARKPVRMFRL]
#
##gff-version	3
##query	GD25314%20[Drosophila%20simulans] 1 388
2R	Scipio	protein_match	14219500	14219649	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 1 50
2R	Scipio	protein_match	14195355	14195492	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 51 96
2R	Scipio	protein_match	14162784	14162966	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 97 157
2R	Scipio	protein_match	14162645	14162708	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 158 178
2R	Scipio	protein_match	14152618	14152659	1.0	-	2	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 179 192
2R	Scipio	protein_match	14134834	14134881	1.0	-	2	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 179 194
2R	Scipio	protein_match	14126633	14126814	1.0	-	2	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 195 255
2R	Scipio	protein_match	14126380	14126472	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 256 286
2R	Scipio	protein_match	14121017	14121292	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 287 378
2R	Scipio	protein_match	14120928	14120957	1.0	-	0	gene_id=kassiopeia_gene_id406128 GD25314 [Drosophila simulans];Query=GD25314%20[Drosophila%20simulans] 379 388
# protein sequence = [MPYNGASNGSGASGAGGGGATIVVTEGPQNKKIRTGVQQPGENDVHMHARSTPQQNQQQALMNKSNDDLRRKRPETTR
# PNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKNGVQAMVEFDNLDAATRARENLNGADIYAGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL
# STGKSLFSIPENVVMLESQPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDKL
# FNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPTFKEYTGSKNNRFLSPAQASKNR
# IQPPSKILHFFTHRPA]
#
##gff-version	3
##query	GD25488%20[Drosophila%20simulans] 1 70
2R	Scipio	protein_match	11783144	11783158	1.0	-	0	gene_id=kassiopeia_gene_id406296 GD25488 [Drosophila simulans];Query=GD25488%20[Drosophila%20simulans] 1 5
2R	Scipio	protein_match	11782274	11782474	1.0	-	0	gene_id=kassiopeia_gene_id406296 GD25488 [Drosophila simulans];Query=GD25488%20[Drosophila%20simulans] 6 72
2R	Scipio	protein_match	11779484	11779678	1.0	-	0	gene_id=kassiopeia_gene_id406296 GD25488 [Drosophila simulans];Query=GD25488%20[Drosophila%20simulans] 6 70
# protein sequence = [MMHMKNTYIPPAPAPAAPVETYIPPAAPAPAYIPPAPVQAEEPIIEEIEQPAQDGYRYKTVRRRVFRHRN]
#
##gff-version	3
##query	GD25523%20[Drosophila%20simulans] 1 650
2R	Scipio	protein_match	11327729	11328119	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 1 130
2R	Scipio	protein_match	11321368	11321736	1.0	-	2	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 131 253
2R	Scipio	protein_match	11321139	11321303	1.0	-	2	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 254 308
2R	Scipio	protein_match	11320163	11320356	1.0	-	2	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 309 373
2R	Scipio	protein_match	11302047	11302265	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 374 446
2R	Scipio	protein_match	11300242	11300384	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 447 494
2R	Scipio	protein_match	11300086	11300176	1.0	-	1	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 495 524
2R	Scipio	protein_match	11299854	11299964	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 525 561
2R	Scipio	protein_match	11299517	11299618	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 525 558
2R	Scipio	protein_match	11296216	11296323	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 562 597
2R	Scipio	protein_match	11295778	11295936	1.0	-	0	gene_id=kassiopeia_gene_id406331 GD25523 [Drosophila simulans];Query=GD25523%20[Drosophila%20simulans] 598 650
# protein sequence = [MAFIWRRRSTTIVKLVAFALAIWFCIAFLVYTDDTRRRAAQEGAGASGGGSAPGVGGGAGGLGDPIALALRNEPAGED
# FGINGNVIGGGGQKQAHDEADIPPTVGKHKADLQAERMRKKAAEQPKKKPQEDSKKVIDPPANFEENPGELGKPVRLPKEMSEEMKKAVDDGWTKNAF
# NQYVSDLISVHRTLPDPRDAWCKDEARYLTDLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPKVQIIR
# GQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPVPERERKRH
# NSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEVWMDEYS
# QYYYHRIGNDKGDWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIPGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGGNQYWMLSKA
# GEIRRDDSCLDYAGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSGKCLAISESKDKLLMEECSASLSRQQWTLENYDSSKL]
#
##gff-version	3
##query	GD25570%20[Drosophila%20simulans] 1 995
2R	Scipio	protein_match	10725206	10725623	1.0	-	0	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 1 139
2R	Scipio	protein_match	10724934	10725146	1.0	-	2	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 140 210
2R	Scipio	protein_match	10724699	10724880	1.0	-	2	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 211 271
2R	Scipio	protein_match	10724537	10724676	1.0	-	2	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 211 257
2R	Scipio	protein_match	10722613	10724521	1.0	-	0	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 272 907
2R	Scipio	protein_match	10722292	10722554	1.0	-	2	gene_id=kassiopeia_gene_id406377 GD25570 [Drosophila simulans];Query=GD25570%20[Drosophila%20simulans] 908 995
# protein sequence = [MLDEHILKEMQLSFQLTEQRELASGRRKPENPQHRPAAPKKKVISKVASKPAKILEAMIQKTQMESPKKSKKNKTAGT
# KRPLSNNVSKPDSFPSQKRLKKDDTLPKKNPLNKSSNVAAKKSAAKSKSAKLPPIPKVQRRESVPKKTKVKTSNNTKKASLPKKQKVNGAKSSIKVVQ
# NGKIVEIMAKPELSDTEMNSLDDWSEEDDYLIESDSENDVVEEIDETFLKHPKIFKAKGKGPEYKVSDILPPFEHEEYQGLLLNGDGSGTVRKIEVFK
# RAQEETDSDEEDIDYEPRDSDDFGSEEFDSEVSDSEDTTSADYDSDGDFYSEDSDMEDVSDSDSEEYGSDFFDSDDLDSTYEPPDIEGFFDDPQPVGM
# QREPLIIEEIFDDPPVEKKQELIKQSSAVVTVVGHSFSEPSEKESEAAIENEENAEVSLPEVITPEKENDLKLSDAPFYRNPQANPTELSVFENSLKS
# NHVLAVIKEDLEVYGTLVLTLLCGQISVNGYKARRQEAITIYSPKGLNWVSISPTKTKKPLKDEVDWEVLNKNFTRAQLDRIKTSFQRQTNAIVLLHR
# NASAQQLVDTFGKHMAQNVFPLVNSSNRPFSQSETLLHCLIQASDQKRTLQVPQVWNKLKMHATSRIMVAGGKGVGKSSLLRYLINRNLAQFPSMLLI
# DLDIGQPEIFVPQTISCTVIDGPLLGPGFLYNRQPEHAIVVGHTNIVLCAEQYARAVIQLVQNIQNDAKYSNIPWLINTMGYNKGFGMELMALLVDRI
# RPTDLVQIASPIPINNFDTALDQSSLSQIKPIIYCAEEFKIKEIPKYTLHKLLSAVPAKEKGTWSLSAKDMRYSNLLARLSSCLTGNAKSLTDCEPLG
# VSLESLQILHPTSKSYSHEELIRGMEANVVYLCHHGEGLAQCLGIGVVRAIDYERKELYLVPAMPLQKMSLVDCLILGGEQVLPQGFLRDQGQGVSSS
# VPFVFILDDSKSSKSIQQIYHRAPAFLGVPANQRN]
#
##gff-version	3
##query	GD25582%20[Drosophila%20simulans] 1 1330
2R	Scipio	protein_match	10595174	10595780	1.0	-	0	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 1 202
2R	Scipio	protein_match	10594033	10594097	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 224
2R	Scipio	protein_match	10593074	10593141	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 225
2R	Scipio	protein_match	10592163	10592227	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 224
2R	Scipio	protein_match	10591629	10591693	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 224
2R	Scipio	protein_match	10589438	10589499	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 223
2R	Scipio	protein_match	10588667	10588728	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 203 223
2R	Scipio	protein_match	10586985	10587630	1.0	-	0	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 224 438
2R	Scipio	protein_match	10586749	10586921	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 439 496
2R	Scipio	protein_match	10586346	10586433	1.0	-	0	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 497 525
2R	Scipio	protein_match	10584587	10585910	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 526 967
2R	Scipio	protein_match	10584391	10584523	1.0	-	1	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 968 1011
2R	Scipio	protein_match	10583236	10583404	1.0	-	0	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 1012 1067
2R	Scipio	protein_match	10581439	10581484	1.0	-	2	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 1068 1083
2R	Scipio	protein_match	10580638	10581379	1.0	-	1	gene_id=kassiopeia_gene_id406389 GD25582 [Drosophila simulans];Query=GD25582%20[Drosophila%20simulans] 1084 1330
# protein sequence = [MGETENGDIEPRASAEPEAASAQDTLQVPTQKKRKLKSPTPGSLRGRSATPIHGRSQTPFTLYMTRRSATPSTWRSIT
# PFLKREEKEKTPFELGRDIKSQTTCNIAVFDRALVMDISEPLDVQKPVRYITSDLSVIDRAAVMDVSNVEVIYVVEEYEEVEEEEIIEEVKPKKKEKK
# ARKPRAQRTSIDKDMSPSGAEDGDDQDAYHSQGNQLTLECKVSGSPKPEIQWIKGTEPIEASEKFKLSDQADGYAKLVIVNPTEKDSGIYWCVARNEG
# AENKISHQVDFKGRQHYSLEKTHGFFHRDPNKPHFLLPLGNQTVCNGGTVAISAEFMETSTPIEVKWLRDRRVVDGPNVKALADRGVYTLTIMNAGPE
# VEGTYTCRASNAFGRIESNVNVDVAVGAEKDERPPLFLSRPDTEMKIAVGDPFSLSFRIAGDPKPKLTFMKGTKDITQSDRVSKEVSDDYTRFSVQQA
# QISDSGTYFVVARNNFGTDRIFVTVTVNPRARSATPTQPRWGLPLDSYSDTSYFRDPPGCISTEPLVVDSGPTHISLSWGKPVSANSAPVMAYKVEAW
# VVGHEGGAYWRELGLTPINSFDAFNLKPNVEYHFRVTPKNRYGWGPTVQTSSPLQVGGVECLPEFVKILPGQAKALLGSSFTLQCNMRGAPRPQVTWF
# KDGIQLSSSSERVKIRQIGSTCALTIATVSELDSGRYTCEATNSKGRVSTFARLQVVSDSRIYEADSRLKEIAHGRNVADVGDSLPIFTMRLRDRRVQ
# VTYPVRLTCQIVGYPVPEILWYKDDELIHTDRKHLISAEGQFFTLEIAATTLDDSGTYTCLARNELGSVSCHCTLVVDKGIRAYISPDFYVPLDPFYI
# FREGSEIRLSTKVEAYPSVGVTWHRNGMRLRPSRRLTATLDSNGYVELIIAEATVRDAGIYVCVASNVVGKVETICRVAIEEEENKAVVPQRSLEIPS
# IKTDDLPYSKEPLFVVKPRSSEAYEGDNVIIFCEVVGDPKPEVVWLRDFLNPEYYKDAPHFRRIGDGPEYRLEIPSAKLDFTGTYSVIASNCHGEAKA
# VISLQIFAKDILNKSRMDKVHTRHGNIETLPRFVRNLRNLRCCDGDAISLECHVEADPEPFIIWEKDGHVVPSDRDYVMSFDGTKATLSIPRVYPEDE
# GEYTCVAKNSVGRSLSSACIIVDVPEEKENMLSRQLARPSGLLSAHSTPRSTPRSTPARSFSPLRLSYRTSSIDLSGVAERRRSDARNAITAPKFLAI
# PYNRVVEEGDSVRFQCAISGHPTPWATWDKDGLIVTPTPRIAVKEIDDLRIIEIDEVTFDDARPVSRHAGERFRAY]
#
##gff-version	3
##query	GD10738%20[Drosophila%20simulans] 1 75
2R	Scipio	protein_match	4942943	4942965	0.973	-	0	gene_id=kassiopeia_gene_id392224 GD10738 [Drosophila simulans];Query=GD10738%20[Drosophila%20simulans] 1 8
2R	Scipio	protein_match	4942804	4942879	0.973	-	1	gene_id=kassiopeia_gene_id392224 GD10738 [Drosophila simulans];Query=GD10738%20[Drosophila%20simulans] 9 33
2R	Scipio	protein_match	4937048	4937123	0.973	-	1	gene_id=kassiopeia_gene_id392224 GD10738 [Drosophila simulans];Query=GD10738%20[Drosophila%20simulans] 9 33
2R	Scipio	protein_match	4936859	4936984	0.973	-	0	gene_id=kassiopeia_gene_id392224 GD10738 [Drosophila simulans];Query=GD10738%20[Drosophila%20simulans] 34 75;Mismatches=47
# protein sequence = [MSTGRNVDEILRTIDSLQLTDRLKVVATPANWTPGTKVMILPTVTDxEAHKLFPKGFDKVSMPSGVNYVRTTENY]
#
##gff-version	3
##query	GD10208%20[Drosophila%20simulans] 1 384
2R	Scipio	protein_match	2548185	2548328	1.0	-	0	gene_id=kassiopeia_gene_id391717 GD10208 [Drosophila simulans];Query=GD10208%20[Drosophila%20simulans] 1 48
2R	Scipio	protein_match	2541586	2541729	1.0	-	0	gene_id=kassiopeia_gene_id391717 GD10208 [Drosophila simulans];Query=GD10208%20[Drosophila%20simulans] 1 48
2R	Scipio	protein_match	2531397	2532404	1.0	-	0	gene_id=kassiopeia_gene_id391717 GD10208 [Drosophila simulans];Query=GD10208%20[Drosophila%20simulans] 49 384
# protein sequence = [MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQENLRVGLERKKLEIDPKYLLLLGFTSSNDA
# AGQQQQLDQQNVVDNGSPGQQLPKTDFSAPATKAELELSELRGLRRPQDAVTFGSQAGDQKGQRKRITTPYNGTKSNFTIVSYVLEGQAASAILLAQN
# IAAKLPSEYLVIYDLGVSEEQIRDLGAYCNNSRCSVITYDLSEFPSFVADQRTHAYRPIVIKDGLMRSRSVLFLENSMRVRGGSAQLRSLQSIVMNPG
# EGKSGVKSAGVLGWNTATAVSSLTHPKMFDYFESKAEEFNFLRMVDLDAVFFSDSSLVTEKIMFPWLKCCLTLECIDPIGESGEMGGGGGLGICKTVI
# RNVPQSVCLTPI]
#
##gff-version	3
##query	GD10224%20[Drosophila%20simulans] 1 540
2R	Scipio	protein_match	2346425	2346487	1.0	-	0	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 1 21
2R	Scipio	protein_match	2346217	2346368	1.0	-	0	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 22 72
2R	Scipio	protein_match	2345737	2345879	1.0	-	1	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 73 119
2R	Scipio	protein_match	2345546	2345678	1.0	-	2	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 120 164
2R	Scipio	protein_match	2345003	2345112	1.0	-	1	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 165 200
2R	Scipio	protein_match	2344685	2344939	1.0	-	2	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 201 285
2R	Scipio	protein_match	2341766	2341893	1.0	-	2	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 286 328
2R	Scipio	protein_match	2341586	2341686	1.0	-	0	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 329 362
2R	Scipio	protein_match	2334906	2335011	1.0	-	1	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 363 397
2R	Scipio	protein_match	2331397	2331550	1.0	-	1	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 363 413
2R	Scipio	protein_match	2331197	2331336	1.0	-	0	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 414 460
2R	Scipio	protein_match	2330932	2331130	1.0	-	1	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 461 526
2R	Scipio	protein_match	2330817	2330858	1.0	-	0	gene_id=kassiopeia_gene_id391733 GD10224 [Drosophila simulans];Query=GD10224%20[Drosophila%20simulans] 527 540
# protein sequence = [MRLDTNSNVDFKAFESSSSSCPVKLDNLATWGGSQKTDTRLPITDYSNLGGPRHNHSPFPLCKDVNNRFVIWDGDMTT
# LEVDAITNTSDETLTESNSISERIFAVAGNQLREELSTTVKECRTGDVRITRGYNLPAKYVLHTVAPAYREKFKTAAENTLHCCYRNVLCKAKELNLH
# TIALCNISAHQKSFPADVAAHIALRTIRRYLDKCTLQVVILCVGSSERGTYEVLAPLYFPRDQLEERSALWQLPKDIGGEFGEPQHPDPDRQIRIIRN
# PQHSVHMRHRLADDDSDVSPHDMEGNSSDLECGARDMNGLSLNSYSSGLQAQLQRDLDRQHLLSDRPRTGVYENVISEGVEGIEHQERYERLLRRAQV
# EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGDYVISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYI
# VHPTFWTKMMTWWFTTFMAPAIKAKVHSLPGVEHLYSAITKDQLEIPAYITEYDMATNGLHYFNPVPTAS]
#
##gff-version	3
##query	GD10252%20[Drosophila%20simulans] 1 536
2R	Scipio	protein_match	2084184	2084238	1.0	-	0	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 1 18
2R	Scipio	protein_match	2084086	2084121	1.0	-	2	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 19 30
2R	Scipio	protein_match	2082471	2082592	1.0	-	2	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 31 71
2R	Scipio	protein_match	2082043	2082101	1.0	-	0	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 72 91
2R	Scipio	protein_match	2079482	2079662	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 92 151
2R	Scipio	protein_match	2079267	2079413	1.0	-	0	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 152 200
2R	Scipio	protein_match	2078732	2078895	1.0	-	0	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 201 255
2R	Scipio	protein_match	2078439	2078669	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 256 332
2R	Scipio	protein_match	2078184	2078381	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 333 398
2R	Scipio	protein_match	2077935	2078050	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 399 436
2R	Scipio	protein_match	2077234	2077349	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 399 436
2R	Scipio	protein_match	2076514	2076649	1.0	-	2	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 437 482
2R	Scipio	protein_match	2076294	2076456	1.0	-	1	gene_id=kassiopeia_gene_id391758 GD10252 [Drosophila simulans];Query=GD10252%20[Drosophila%20simulans] 483 536
# protein sequence = [MFDNAIKPQPEANGAPKNGGDRPITTVINIEPEPETESPIGIFTSQPERQQQQPEQLQSESESDRMANFDDTLQRARL
# AFSSGKTRNVSFRRKQLENLLRCYEEHENEIISALEADLRRPKQESLIVETEFMKNDIKHILFHLDEWVQSEKPSKSFVNLMDDVQIYNDPFGVVLVI
# GAWNYPLQLLLVPVASAIAAGNCVDCYPVVCGGPSETAELLNQRFDYIFYTGSTRVGKIIHAAANKYLTPTTLELGGKSPCYIDKSVELRTAVKRILW
# GKLINCGQTCIAPDYILCSKEVQEKFIAEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGLMKSGRVAVGGNYDASERFIEPTILVDVKESDPIME
# EEIFGPILPIFNVESAYDAIKFINARESPLVLYIFTSETEVQNLFINGTQSGGLCVNDTIMHYAVDVLPFGGVGMSGMGSYHGKYGFETFTHKKSCLG
# KDLSAFGEKLASARYPPYSDRKGSLLSFLLRKRRPLPNLHLSHVLAIGLGVGLTVLANYYLQVRKV]
#
##gff-version	3
##query	GD10305%20[Drosophila%20simulans] 1 491
2R	Scipio	protein_match	1435745	1435793	1.0	-	0	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 1 16
2R	Scipio	protein_match	1435352	1435666	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 17 121
2R	Scipio	protein_match	1434723	1434977	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 17 101
2R	Scipio	protein_match	1433956	1434600	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 122 336
2R	Scipio	protein_match	1433719	1433901	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 337 397
2R	Scipio	protein_match	1433514	1433651	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 398 443
2R	Scipio	protein_match	1433312	1433454	1.0	-	2	gene_id=kassiopeia_gene_id391808 GD10305 [Drosophila simulans];Query=GD10305%20[Drosophila%20simulans] 444 491
# protein sequence = [MLDTMIKEGRVIAVLFYDNNDKKSQKVLEELENIDDECDALGITFVKIDNPEEAVEYGINKVPKLIYFEKGIPTIYEG
# NLEDEEKLLKWLTDQTSSDQIEDITDEMLDLIIEKMPHVAVLFYDKDDKQDMRILNELENIDDELEKEGIVIVRIDNAAEAKEYGLDHLPALIYFENK
# IPALYEGDLMNEDEVLEWLLVQKKTATIEEVTDEILVTLINEHEYVVVFFTGPCEPGETCEHTLNALESIDDELDEAGIIFVTTEDTGIAKKYNVKTY
# PRLVFFRNRDPLHFTGDLDDEDEVLAWITDDETLEIPGKIEEVNVKMLDKILAENDHVVVFFYAEGDKKAQKILNELENIDDECEEKDIDFVKTSDDD
# IDKEYDLPGLPALAFYRHKFRTIYTGDLMKEEEILEWVIDLHESTADVIESVDRKTLQVLINDVEHLAVFFYDDECESCSDILEELENIDDDSDKHGI
# QFVKSKDVKLAHETGIFVFPA]
#
##gff-version	3
##query	GD10362%20[Drosophila%20simulans] 1 127
2R	Scipio	protein_match	183355	183563	1.0	-	0	gene_id=kassiopeia_gene_id391863 GD10362 [Drosophila simulans];Query=GD10362%20[Drosophila%20simulans] 1 70
2R	Scipio	protein_match	183221	183341	1.0	-	1	gene_id=kassiopeia_gene_id391863 GD10362 [Drosophila simulans];Query=GD10362%20[Drosophila%20simulans] 71 110
2R	Scipio	protein_match	182580	182751	1.0	-	1	gene_id=kassiopeia_gene_id391863 GD10362 [Drosophila simulans];Query=GD10362%20[Drosophila%20simulans] 71 127
# protein sequence = [MAVWAECQHKCLDYHLTQFLTDHGCFRAYLLRFRHVELAQCLFCVDGEETAEHVLNQLHGGEGGAKDAVRFTAEREQL
# KTLSGTPFSPSGSFAAMLANSGAWELGHSLIINMMKRVRSDEMANRVDV]
#
##gff-version	3
##query	GD10517%20[Drosophila%20simulans] 1 477
2R	Scipio	protein_match	2503707	2503740	0.996	+	0	gene_id=kassiopeia_gene_id392014 GD10517 [Drosophila simulans];Query=GD10517%20[Drosophila%20simulans] 1 11
2R	Scipio	protein_match	2505075	2505284	0.996	+	2	gene_id=kassiopeia_gene_id392014 GD10517 [Drosophila simulans];Query=GD10517%20[Drosophila%20simulans] 12 81
2R	Scipio	protein_match	2505347	2505801	0.996	+	2	gene_id=kassiopeia_gene_id392014 GD10517 [Drosophila simulans];Query=GD10517%20[Drosophila%20simulans] 82 233
2R	Scipio	protein_match	2505866	2506597	0.996	+	0	gene_id=kassiopeia_gene_id392014 GD10517 [Drosophila simulans];Query=GD10517%20[Drosophila%20simulans] 234 477
2R	Scipio	protein_match	2510119	2510850	0.996	+	0	gene_id=kassiopeia_gene_id392014 GD10517 [Drosophila simulans];Query=GD10517%20[Drosophila%20simulans] 234 477;Mismatches=333
# protein sequence = [MGFEPSVDKARPGGLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQSTAGAPFYSWDTSDKSLILSSFFWGYVVSH
# VPAGLLAKRFGAKLVLGLATAIGGILCFFHPIAAKSGWQSICALRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTGVYSGAQFGTAVILVSSGFIF
# ESSMGWPGLFYLSGGISLAWALLFFWQAANEPATASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYGLLAAHCGFTWGFYTLLTEMPTYMS
# MVLQLNVKSNAFLSSLPYFAMGLLCFVVSPISDLLINRGTISITTARKLFNSIGQWGPxACLIGLGYMTADEKTWAILLLTLAVGINAGCSCGYLINH
# IDLSPNFAGPMMGVTNGIAGVTSIIAPLVVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQSWNEPPSTSSTMTLRSHQENDSKSIAPT
# SDKDIRY]
#
##gff-version	3
##query	GD10572%20[Drosophila%20simulans] 1 73
2R	Scipio	protein_match	3044206	3044296	1.0	+	0	gene_id=kassiopeia_gene_id392066 GD10572 [Drosophila simulans];Query=GD10572%20[Drosophila%20simulans] 1 30
2R	Scipio	protein_match	3055646	3055773	1.0	+	2	gene_id=kassiopeia_gene_id392066 GD10572 [Drosophila simulans];Query=GD10572%20[Drosophila%20simulans] 31 73
2R	Scipio	protein_match	3058153	3058280	1.0	+	2	gene_id=kassiopeia_gene_id392066 GD10572 [Drosophila simulans];Query=GD10572%20[Drosophila%20simulans] 31 73
# protein sequence = [MDVGIESSNLAWQQSLEEQCQPTHLLRGASGRQAADNDDDDLVASRLSVLGPRFLGLTPQVHDYAHPFRPPSR]
#
##gff-version	3
##query	GD10606%20[Drosophila%20simulans] 1 3487
2R	Scipio	protein_match	3427366	3427419	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1 18
2R	Scipio	protein_match	3430520	3430723	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 19 86
2R	Scipio	protein_match	3431665	3431742	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 87 112
2R	Scipio	protein_match	3431794	3432182	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 113 242
2R	Scipio	protein_match	3432247	3432771	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 243 417
2R	Scipio	protein_match	3432831	3432955	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 418 458
2R	Scipio	protein_match	3433014	3434091	1.0	+	2	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 459 818
2R	Scipio	protein_match	3437240	3438104	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 819 1106
2R	Scipio	protein_match	3438627	3438719	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1107 1137
2R	Scipio	protein_match	3438752	3439105	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1138 1255
2R	Scipio	protein_match	3439698	3439835	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1256 1301
2R	Scipio	protein_match	3439989	3440275	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1302 1397
2R	Scipio	protein_match	3440337	3442434	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 1398 2096
2R	Scipio	protein_match	3442782	3442894	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2097 2134
2R	Scipio	protein_match	3443215	3443324	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2097 2133
2R	Scipio	protein_match	3443536	3443881	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2135 2249
2R	Scipio	protein_match	3444094	3444397	1.0	+	0	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2250 2350
2R	Scipio	protein_match	3444676	3444786	1.0	+	2	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2351 2387
2R	Scipio	protein_match	3444844	3445263	1.0	+	2	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2388 2527
2R	Scipio	protein_match	3445327	3445528	1.0	+	2	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2528 2595
2R	Scipio	protein_match	3445592	3448268	1.0	+	1	gene_id=kassiopeia_gene_id392096 GD10606 [Drosophila simulans];Query=GD10606%20[Drosophila%20simulans] 2596 3487
# protein sequence = [MAEAEGGSEQDDVSFLRTEDMVTLSCTATGERVCLAAEGFGNRHCFLENIADKNVPPDLSQCVFVIEQALSVRALQEL
# VTAAGSETGKGTGSGHRTLLYGNAILLRHHNSDMYLACLSTSSSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLH
# TTKENEQSIVNASFHVTHWSVQPYGTGISRMKYVGYVFGGDVLRFFHGGDECLTIPSTWGREAGQNIVIYEGGVVMAQARSLWRLELARTKWTGGFIN
# WYHPMRIRHITTGRYLGVNDSNELILVKKEEASIATTTFCLRQEKDDEKKVLEDKDLEVIGSPIIKYGDTTVIVQHCETSLWLSYKSYETKKKGVGKV
# EEKQAILHEEGKMDDCLDFSRSQEEESKTARVIRKCSSLFTQFITALETLQSNRRHSIFFQKVNLNEMVMCLEDLINYFSQPEDDMEHEEKQNRFRAL
# RNRQDLFQEEGVLNLILEAIDKINIITSQGFLASVVAGDETGQSWDLISTYLYQLLAAIIKGNHTNCAQFANSNRLNWLFSRLGSQASSEGSGMLDVL
# HCVLIDSPEALNMMRDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDFLLPGKNLLLQTLLVDHVASIRPNIFVGRVDGSSMYQKW
# YFEVTMDHIEQTTHMMPHLRIGWANTSGYVPYPGGGKKWGGNGVGDDLYSFGFDGAYLWTGGRKTLVVDALPEEPFIRKGDVVGVAIDLSVPIITFTF
# NGVKVRGSFRDFNLDGMFFPVMSCSSKLSCRFLFGGDHGRLKFAPPMGSLHSCIPECLGPALRGEGEGLFRAIVEANRMSERISDRCKMQDEAEGTIA
# GLNFTHPLPEGEEDEDYIDTGAAILNFYCTLVDLLGRCAPDASVIEQGKNESLRARAILRSLVPLEDLQGVLSLKFTLSQTAPGEEKPKSDMPSGLLP
# NNKQSIVLFLERVYGIEAQDLFYRLLEDAFLPDLRTATILDKSDGSESDMALAMNRYIGNSILPLLIKHSKFYNEAENYASLLDATLHTVYRLSKNRM
# LTKGQREAVSDFLVALTSQMQPAMLLKLLRKLTVDVSKLSEYTTVALRLLTLHFDRCAKYYGSTQSQGSYGASSDEEKRSLSNMDYDPELFGKALPCL
# IAIGCALPPDYSLSKNTDEDYYGRQMGAPDQPQYMPNPIDTNNVHLDNDLNSLVQKFSEHYHDAWASRRLEGGWTYGDIRSDNDRKHPRLKPYNMLSE
# YERERYRDPVRECLKGLLAIGWTVEHSEVEVPLNHRGSTRRQSKPQINEFQNEGSPFNYNPHPVDMSNLTLSREMQNMAERLAENSHDIWAKKKNEEL
# NGCGGVIHPQLVPYDLLTDKEKKKDRERSQEFLKYMQYQGYKLHKPSKGGAVEEGGVTQAAVELRFSYSLLEKLIQYLDRATINMKLLKPSTTFSRRS
# SFKTATRDIKFFSKVVLPLMEKYFSTHRNYFIAIATATNNIGAASLKEKEMVASIFCKLAALLRNRLSAFGPDVRITVRCLQVLVKGIDARTLTKNCP
# EFIRTSMLTFFNQTSDDLGNTILNLQDGKYSHLRGTHLKTSTSLGYVNQVVLPVLTAMFDHLAACDYGSDLLLDEIQVASYKILAALYHLGTDGTLTH
# DRKYLKTEIERHRPALGSCLGAYSSCFPVAFLEPHLNKHNQYSLLNRIADHSLEAQDIMVKMESCMPNLETILAEVDQFVESDKTYNDAPHIIDVILP
# LLCAYLPFWWSQGPDNVSPTSGNHVTMVTADHMNPLLRNVLKMIKKNIGNDNAPWMTRIAAYTQQIIINTSEELLKDPFLPLAERVKKRTENMLHKED
# SMRGFIKSATDDTSQVETQLQEDWNLLVRDIYSFYPLLIKYVDLQRNHWLKDNIPEAEELYNHVAEIFNIWSKSQYFLKEEQNFISANEIDNMALIMP
# TATRRSAISEGAPAVGGKVKKKKKNRDKKRDKDKEVQASLMVACLKRLLPVGLNLFAGREQELVQHCKDRYLKKMPEYDVIEFARNQLTLPDKLDPSD
# EMSWQHYLYSKLGKTEEPVDEQALEKANVNSNEKGKDKTQETVDRIVAMAKVLFGLHMIDHPQQQSKNVYRSVVSIQRKRAVIACFRQTSLHSLPRHR
# ACNIFARSYYEQWLQEENVGQEVMVEDLTQTFEDSEKSKKEGEETDSKPDPLTQLVTTFCRGAMTERSGALQEDLLYMSYAQIAAKSTGKEEEEGGDE
# EGGEGGEEGEGTSIHEQEMEKQKLLFHQARLSNRGVAEMVLLHISASKGIPSEMVMTTLNLGIAILRGGNIDIQMGMLNHLKEKKDVGFFTSIAGLMN
# SCSVLDLDAFERNPKQRVSLGVGSEGAAGEKNMHDAEFTCALFRFIQLTCEGHNLEWQNYLRTQAGNTTTVNVVICTVDYLLRLQESIMDFYWHYSSK
# EIIDPAGKANFFKAIEVASQVFNTLTEVIQGPCTLNQQALAHSRLWDAVGGFLFLFSHMQDKLSKHSSQVDLLKELLNLQKDMITMMLSMLEGNVVNG
# TIGKQMVDTLVESASNVELILKYFDMFLKLADLIESPSFHEVDMKNEGWVTPKDFREKMEQSKNYTPEEMDFLLACCERNHEGKIDYRAFVEHFHEPS
# KEIGFNLAVLLTNLSEHMPNEPRLARFLETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKPQIRESKRAFFYSIVTEGGDKEKLEAF
# VNFCEDAIFEMTHASGLMATDDGGGNVKRDTAYSSYMSEEEEERAARDPIRRTITAVKEGLKFGVHMLSPANIKHQIGVMQTKSIPELIVGFFKIIFY
# IFYYTGYAHFCVVRYIFGILLNLMRGPAPEQEEEPVVEEETFGRALPPLPLEEPPGTVQAFGLDINKEENGMYKVVVHESPANSSMEEGGESSPEDGA
# AASGELVEGEPHQEPISIVDLLGGEAAKKAAQERQEAQKAQEAAMASIEAEAKKSSSAPQETPAVHQIDFSQYTHRAVSFLARNFYNLKYVALVLAFS
# INFMLLFYKVTSFTEEADSSAEEELILGSGSGGGADITGSGFGGSGDGGSGDGEMEDEIPELVHVDEDFFYMEHVLRIAACLHSLVSLAMLIAYYHLK
# VPLAIFKREKEIARRLEFEGLFIAEQPEDDDFKSHWDKLVISAKSFPVNYWDKFVKKKVRQKYSETYDFDSISNLLGMEKSTFAAQESEETGIFKYIM
# NIDWRYQVWKAGVAFTDNAFLYSLWYFSFSVMGNFNNFFFAAHLLDVAVGFKTLRTILQSVTHNGKQLVLTVMLLTIIVYIYTVIAFNFFRKFYIQEE
# DEEVDKKCHDMLTCFVFHLYKGVRAGGGIGDEIGDPDGDDYEVYRIIFDITFFFFVIIILLAIIQGLIIDAFGELRDQLESVKDNMESNCFICGMGKD
# FFDIVPHGFDTHVQKEHNLANYMFFLMHLINKPDTEYTGQETYVWNMYQQRSWDFFPVGDCFRKQYEDELSGGGGGG]
#
##gff-version	3
##query	GD10715%20[Drosophila%20simulans] 1 607
2R	Scipio	protein_match	4628369	4628469	1.0	+	0	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 1 34
2R	Scipio	protein_match	4628583	4628691	1.0	+	1	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 35 70
2R	Scipio	protein_match	4628841	4628949	1.0	+	1	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 35 70
2R	Scipio	protein_match	4629456	4629564	1.0	+	1	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 35 70
2R	Scipio	protein_match	4630218	4630406	1.0	+	0	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 71 133
2R	Scipio	protein_match	4630631	4631073	1.0	+	0	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 134 281
2R	Scipio	protein_match	4631131	4631973	1.0	+	1	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 282 562
2R	Scipio	protein_match	4632027	4632162	1.0	+	1	gene_id=kassiopeia_gene_id392202 GD10715 [Drosophila simulans];Query=GD10715%20[Drosophila%20simulans] 563 607
# protein sequence = [MALHRIIEAIDAISSTAYSHQRTFIMEVMGRHCGYLAISAAIATEADFMFIPEEPVSVNWKDEICVKLHQERSAGQRL
# NIVIVAEGAMDREGHPITAEDVKKVIDERLKHDARITVLGHVQRGGNPSAFDRILACRMGAEATLALMEATKDSVPVVISLDGNQAVRVPLMECVERT
# QAVAKAMAEKRWADAVKLRGRSFERNLETYKMLTRLKPPKENFDADGKGIEGYRLAVMHIGAPACGMNAAVRSFVRNAIYRGDVVYGINDGVEGLIAG
# NVRELGWSDVSGWVGQGGAYLGTKRTLPEGKFKEIAARLKEFKIQGLLIIGGFESYHAAGQIADQRDNYPQFCIPIVVIPSTISNNVPGTEFSLGCDT
# GLNEITEICDRIRQSAQGTKRRVFVIETMGGYCGYLATLAGLAGGADAAYIYEEKFSIKDLQQDVYHMASKMAEGVSRGLILRNEKASENYSTDFIYR
# LYSEEGKGLFTCRMNILGHMQQGGSPTPFDRNMGTKMAAKCVDWLATQIKANIDANGVVNCKSPDTATLLGIVSRQYRFSPLVDLIAETNFDQRIPKK
# QWWLRLRPLLRILAKHDSAYEEEGMYITVEEECDTDAVA]
#
##gff-version	3
##query	GD10716%20[Drosophila%20simulans] 1 601
2R	Scipio	protein_match	4633390	4633824	1.0	+	0	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 1 145
2R	Scipio	protein_match	4634750	4634998	1.0	+	0	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 146 228
2R	Scipio	protein_match	4635048	4635186	1.0	+	0	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 229 274
2R	Scipio	protein_match	4635625	4635823	1.0	+	0	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 229 294
2R	Scipio	protein_match	4635885	4636192	1.0	+	2	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 295 397
2R	Scipio	protein_match	4636246	4636857	1.0	+	0	gene_id=kassiopeia_gene_id392203 GD10716 [Drosophila simulans];Query=GD10716%20[Drosophila%20simulans] 398 601
# protein sequence = [MVSTRQMCSGGGTSASEGVSPFGGAGSGSASGPGIASGSAVASGSGTGVQEPPESTANRSSVLRRTTSYQGHQAHSSY
# RVVSAGSLAESPSAVTRHHSYTMQMQRQRPPTATATTSALSLYDLPNELIEKILTYVDYKKVSNLRLVSHRMNDICMAMLNTAFSKQIKTTLSRFQAI
# KASMPRRESHRRNHPLACECDIIETCYMRLSLLQMSMGKHIERGHCCFFPGAILDEVQAILNYISITPRLQRPYRVTDELFDLSTMAMEYFKDRIEAT
# LPGLAYFNKDFYTLPTTTKRPTLAISSDLEDSASNSPPQNHMVLRKGIRKIKQGMKMYNNQLSVLRTELRTCKRKAAEQSKQLAEQSNLISEQQKQTL
# EYANRLDENDKKNEEMSRKFSTLLQELNKCKTELQFWRSKSPAIPAVCSSCNQKVAPVVPPEDFQALVNQGVDPEHFIIINEDVDAESDVSVGELKEF
# ASPDESTTAKLLAVSTAAKNLKRKMPSDSQSNAIASTSKAAEVAQSQSQPMATGNAGAAKAAGGYSPKLFYGNHQRGGVIVSPVSQNQGVAATTDNAA
# PGSEALEEPEEAKKARRVQKANRYVNTPGKRSK]
#
##gff-version	3
##query	GD10742%20[Drosophila%20simulans] 1 354
2R	Scipio	protein_match	4955352	4955469	1.0	+	0	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 1 39
2R	Scipio	protein_match	4961371	4961488	1.0	+	0	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 1 39
2R	Scipio	protein_match	4964087	4964271	1.0	+	2	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 40 101
2R	Scipio	protein_match	4964357	4964517	1.0	+	0	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 102 155
2R	Scipio	protein_match	4976818	4976946	1.0	+	1	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 156 198
2R	Scipio	protein_match	4977011	4977140	1.0	+	1	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 199 241
2R	Scipio	protein_match	4977216	4977369	1.0	+	0	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 242 292
2R	Scipio	protein_match	4977435	4977619	1.0	+	2	gene_id=kassiopeia_gene_id392228 GD10742 [Drosophila simulans];Query=GD10742%20[Drosophila%20simulans] 293 354
# protein sequence = [MGCTTSAEERAAIQRSKQIEKNLKEDGIQAAKDIKLLLLGAGESGKSTIVKQMKIIHESGFTAEDFKQYRPVVYSNTI
# QSLVAILRAMPTLSIQYSNNERESDAKMVFDVCQRMHDTEPFSEELLAAMKRLWQDAGVQECFSRSNEYQLNDSAKYFLDDLDRLGAKDYQPTEQDIL
# RTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDL
# FEEKIRKSPLTICFPEYTGGQEYGEAAAYIQAQFEAKNKSTSKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLY]
#
##gff-version	3
##query	GD10754%20[Drosophila%20simulans] 1 410
2R	Scipio	protein_match	5267619	5267975	1.0	+	0	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 1 119
2R	Scipio	protein_match	5268045	5268195	1.0	+	0	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 120 169
2R	Scipio	protein_match	5268256	5268432	1.0	+	2	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 170 228
2R	Scipio	protein_match	5268514	5268741	1.0	+	2	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 229 304
2R	Scipio	protein_match	5270311	5270487	1.0	+	2	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 170 228
2R	Scipio	protein_match	5270569	5270796	1.0	+	2	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 229 304
2R	Scipio	protein_match	5270887	5271041	1.0	+	2	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 305 356
2R	Scipio	protein_match	5271127	5271288	1.0	+	0	gene_id=kassiopeia_gene_id392240 GD10754 [Drosophila simulans];Query=GD10754%20[Drosophila%20simulans] 357 410
# protein sequence = [MKLQLLCTFIFLSLLKFQAVNTDSNKTEDNSCVKSDNNSNDEDDLWHCIRICCPRKNMMADGGCSFKKHLFRSKLDLS
# IRLDDNSTEALYFNNQTLIITSFWDIDEMIGLRRDEYTLYKNGTIFLHSDQSAKTKEEYCFYPHQIYSDFPETIWIILHKFSSIYIPGAFELTSVSLI
# CYIFTIGIYLFVKELRNDFGKCLISCIFCLFISYLIWLIDDLRLMDGFCSLAGYIMHFFDFANSVWFSIISYCIWKKVTSVDSQENRYEFVSYSIFAY
# GISAIPLGIIFTMNQLWEEDLKKWNWLPSVVGKRSAWLYYFGPDAIMNAFNIIMFVLTIRHIIKTKRNIRNLTERPDKNATCEPIVSADFRYYGRILD
# TDLCFDDRSEYHFLGHFLYNNLSNPLWFWYHFMCPAYL]
#
##gff-version	3
##query	GD10771%20[Drosophila%20simulans] 1 2580
2R	Scipio	protein_match	5605081	5605111	1.0	+	0	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 1 10
2R	Scipio	protein_match	5612819	5612887	1.0	+	2	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 11 33
2R	Scipio	protein_match	5623686	5623742	1.0	+	2	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 11 29
2R	Scipio	protein_match	5642126	5643711	1.0	+	2	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 30 558
2R	Scipio	protein_match	5643771	5644499	1.0	+	0	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 559 801
2R	Scipio	protein_match	5644567	5644674	1.0	+	0	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 802 837
2R	Scipio	protein_match	5644737	5647816	1.0	+	0	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 838 1864
2R	Scipio	protein_match	5647882	5648108	1.0	+	1	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 1865 1939
2R	Scipio	protein_match	5648172	5648229	1.0	+	2	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 1940 1959
2R	Scipio	protein_match	5648258	5650121	1.0	+	1	gene_id=kassiopeia_gene_id392255 GD10771 [Drosophila simulans];Query=GD10771%20[Drosophila%20simulans] 1960 2580
# protein sequence = [MARRKGSGRGKSTVNSRKSALETAREKPKDEPTANTSQDNKFDNNMENATTTTAKHYKTAGKQYKTNKVNNTRRATAA
# AAAAAAAAATTTVTTAATPTKKRTYRETATATTVTQRSTNKANIAAAIALAAATEATAPASATAAATDATLTASKAAATAAATDAASGNSNSSSKPST
# STRDKLGEVPLPTVDSNHIISNNNNNNNNNNTNNNNNNNHHSDNSISENSYEFKSRDKASVSDSKMTLQQMAAVSSNQEPVAPNVVNTMSNSSIISSQ
# QTTANATPATDEAPLGDRSNISRYLHKKFKRLASTTEVDSWSATNGGGALQAGGDAVRTTSLSSNSSLSPPPTTPLANGHHLMTQQQSHQQVQQQQSP
# PPSVAIHEFSANFVNSNHVNAIGHEESIISNSGYKAAGRTRTPLANSNSNTNSTSNSNHAANATLSPASFAQHQQLTQPTTVSPGIPGGAAAPNPACE
# KSGRYVCQYCNLICAKPSVLEKHIRAHTNERPYPCETCGIAFKTKSNLYKHCRSRSHAARARGLEVPADADDGLSDQDAELSNSSSELPSRAGSPYDE
# PINSPTPSPSTLSAAKSAYIQQPPLPTYMQQLPLGSPAAGTLPPTTADNHHSATAQHRQSIDYKPYKPKFHNASLYSCSSKELQQQQIQQQQLQIQQQ
# KHQLAQQKLSIQLPLAQQPSLAHPTLSPSTQMKMKHHINSHQIQLQMQQQQSLLAQQSLLAAMPPGGVYYLGQPPYYNQDAAAAIHQHALAIQQFQIH
# LAQQQQQQQQQQQQQQHPPLVKPPPPMQQAPSLPPQQLVRANSQISSVATAPATPTPAANLSTFASSSGGKQVNVAKVQEHISKLISQNEAIVENKEI
# LLQKKYPKQLSRSRSFNNANSNNASQHGSNASALHANNSHNNTNAQMPERETKVNLAQAIFQKQQQQLQQQQQITQQQQQQITQQQQQQITQQQQQMQ
# LEQQNYYTYIQQQQECQQQQIEPPNGVVKRNAYKPGIVMTTPVKQQQQLPPPPSPLPMQTLQYRQDPATPVAKIEQPTTAVPVMPLNLSAKPKPTLVT
# VPVSSLSTSSLAPTPTTSTNSTSSSKTAPPPAQVNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICASEFRSADDLKLHNSTYCQDASSSAPMSPASS
# PFRSNSISLSLPELKSHMANSKNPLSLAKLAWSQLKTKRSSLVLSRLSAAQTPARTSTVTAPTVTASAPAPAVATVTAPSSAPAPQIEALRFVDAPLP
# SPGPLLGKTPLVDYAQQSAPRKAQDSVVITKMHEDRQFVIEAQPAKRIKTSDLVVASSSQQPTSFNFSFNNQNSSNSVPELQSSKEERLRRFTSSGGS
# MIPISECPDLDNSPKMIRTPLLSGGSFQDVSVKVNNETGSSSKERKLMALVSGSGLLGVSSGPQHFQFPPINSITAFNPLTLPPMSGGDKSTPATPIP
# HVPGMPGPGSLTPQMPLLPPPPQQLQLPIPSSRGRSPNRKQPSPLLLGGGSGELKALSPFGGVQNVPSEFSRQPPTPAQRQALQWNSKETPKKAPFNF
# LRMADNVKTTEPEVRHFNLENVIAGKQQELPLTPLHVDTPNGNAPEETSPVASSSASAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETP
# RPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAGSGKLSYN
# LVASQQIVSSPSTSSTSSAFYQGPLKTPPTVTIAALSEANVAAKANEEAQAKKLETSPSGQPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSM
# LKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPPDSEFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSD
# TDESKSRLKEHEAARGLLSAYRPIQQLQDTPLPAASPANSIGSSGSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRGVASEESAPMDLTKPRG
# SILSISPSPVSLPVHDLPKSQAQQMHDVIFGTSGNESGFMKTLISVSDKVRISAEMEEQAKHEAEGEDVQLQTYIKEHALHQAKIKQSQFSRSYLINT
# LYTAASPVMSSTSTLFTANSRPVMSVNEVPSIEVHEVKTPEAIEAPRSAPELAPVILAQIAQEENEEPNIAEPHNANLPAAVQQPDVNDFTGVLGNPT
# APPTASVAATSVTTTTAASVAPSSTANSTQPAQRTVIVGEDGFKSSTPTSKSGDLQHVSYGRGVPPAPIAGDARPTCTICTKTFQRQHQLTLHMNIHY
# MERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGIS
# LTEIDTSDCENSLISLKLLAQKLVEKDPSKLSSYTTPSGMMQLAQDATGPVSQDSASEDGFSAAIASAIASLDNDSAGNTPKRASSMSEDETVANGLN
# HSLKRRLPGSFSSTGEESDNPPESSGEKRARSGQELPVPVAVPVAASAAASN]
#
##gff-version	3
##query	GD10819%20[Drosophila%20simulans] 1 76
2R	Scipio	protein_match	6280444	6280594	1.0	+	0	gene_id=kassiopeia_gene_id392300 GD10819 [Drosophila simulans];Query=GD10819%20[Drosophila%20simulans] 1 50
2R	Scipio	protein_match	6286809	6286867	1.0	+	2	gene_id=kassiopeia_gene_id392300 GD10819 [Drosophila simulans];Query=GD10819%20[Drosophila%20simulans] 51 70
2R	Scipio	protein_match	6290049	6290125	1.0	+	2	gene_id=kassiopeia_gene_id392300 GD10819 [Drosophila simulans];Query=GD10819%20[Drosophila%20simulans] 51 76
# protein sequence = [MDLSGPQALNNILQPDELKLVPEDIQQKLSAYINNFSDEYCKNRAAANRLGFGIYFWIVVYSYYVEVRDPEDVLEV]
#
##gff-version	3
##query	GD10980%20[Drosophila%20simulans] 1 822
2R	Scipio	protein_match	7988094	7988151	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 1 19
2R	Scipio	protein_match	8017974	8018031	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 1 19
2R	Scipio	protein_match	8041007	8041770	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 20 274
2R	Scipio	protein_match	8047901	8048078	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 275 333
2R	Scipio	protein_match	8048586	8048812	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 334 409
2R	Scipio	protein_match	8049562	8049718	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 410 461
2R	Scipio	protein_match	8053143	8053282	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 462 508
2R	Scipio	protein_match	8053965	8054094	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 509 551
2R	Scipio	protein_match	8060537	8060665	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 552 594
2R	Scipio	protein_match	8061056	8061256	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 595 661
2R	Scipio	protein_match	8073781	8073959	1.0	+	2	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 662 721
2R	Scipio	protein_match	8074024	8074326	1.0	+	0	gene_id=kassiopeia_gene_id392454 GD10980 [Drosophila simulans];Query=GD10980%20[Drosophila%20simulans] 722 822
# protein sequence = [MRPTFDRRLWILLFIISVQCTTYTQPQNINAKSVQKPKPSERREVISRSSSSSHSWPSISAEPADELVDHHGGGKPAK
# CTKNCQKAKAKWAKWRTQLKPHHQAHRAVQHKEVRQRQRRETEEDELDSVLRAPSSTSSSTAVATTVQATSSSSSATRSSLINESKAKRPRSTLHLAP
# EDMQPKRKEPVIIIDDVEEFDSGTSTSDLIARKSREEAEEEEDDGPLEPRVLPLRPVPPNPYEAEEMSVVYAEQHSEIKLMCEVDLDIATSMWYKNGQ
# VVHAMDRTARVTDYRFIKEANGALTITNVMLEDDGKWQCEAENTRRYTENARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGG
# NPRPTLTWEVLLSPGVDRHAQKVSAEVLELEEIKGEKLDKDGYKINSGAKSEARLPAVYRAHHNARILCVMEHPTLKIRQNASLLLDVQYTPSFAISR
# TPGFGYPLREGIEVSLKCDVDSNPPSTPRWQKDDGDTPVPQTGDGFLNFTSIRREHSGWYKCTSRHLNFQYSSIGYYLSVRFDSVDVTSEPDDQDVSV
# AAASHNPNKGQLEVQLGGAVTLQCPQGSLGCWSHLDPISARLRGLGYGSSQPTGQFSLKDVMYQDAGMYKCVGQSPTNKKKLEVLQSVTVSVKGAPTV
# MALNATPVAYPGSPLHLNVEFCANPPAHAARWLHGDRVFTPGNQYGSTVLAYAVKDLPTPFCKEARLTYVSMHERVPRTFYFIVSTPGGVAEAIFNVN
# FTKRHRQLSNSIDDDEEEELNRPEQIHFPVFNGSPADGRGGWAVVLALVLALATRNRH]
#
##gff-version	3
##query	GD11105%20[Drosophila%20simulans] 1 1115
2R	Scipio	protein_match	9874211	9874398	1.0	+	0	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 1 63
2R	Scipio	protein_match	9877848	9878035	1.0	+	0	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 1 63
2R	Scipio	protein_match	9879143	9880133	1.0	+	1	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 64 393
2R	Scipio	protein_match	9880219	9880321	1.0	+	0	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 394 427
2R	Scipio	protein_match	9880383	9880967	1.0	+	2	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 428 622
2R	Scipio	protein_match	9881029	9881158	1.0	+	2	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 623 666
2R	Scipio	protein_match	9881330	9881607	1.0	+	1	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 667 758
2R	Scipio	protein_match	9881907	9881991	1.0	+	2	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 759 787
2R	Scipio	protein_match	9882060	9882942	1.0	+	1	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 788 1081
2R	Scipio	protein_match	9883007	9883108	1.0	+	0	gene_id=kassiopeia_gene_id392576 GD11105 [Drosophila simulans];Query=GD11105%20[Drosophila%20simulans] 1082 1115
# protein sequence = [MNAESTMFPLAFLALLALTSHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIRQTSIIVGAPRAQSTLESQ
# RTINETGAIYRCSLTNSVCSPYVLDSRGNVDAPYSEYTFDSERKDFQWLGGSMDGGTKDTDKLLVCAPRFYAPSSRDYHLHGVCYWVHNTVASTPQHV
# TRISPLRLKSEQVIEEDNGNKASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRGSVILYRQVDPVDNPSASRRDTSKALRRTIRDVDSNDYTPEHY
# APEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTTLLYVATAPQANKQSGEAYIFDVRGKNIHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTDVIVSAP
# QHALEDSHDNGAIYVFINKGFFNFERQILRSPVETKARFGTALSRLGDINHDGYNDVAVGAPFAGNGSVFIYLGSENGLREQPSQRLNAPSQQPSKYG
# SHMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESREIKPEQGKVKITSCYRLSTTSTAKVAQEQELSIRIVMDKQLKRVKF
# TQTQTNEISFNVNANLGEQCRDFETQVRYSEKDIFTPIDLEMHYELNKKVPDSEEFCETCVVVDPMEPKVSTQKIIFSTGCATDVCTADLQLRSKNVS
# PTYILGSADTLRLNYEITNIGETAYLPQFNVTSTSRLAFAQVPGNCKVADAVMVCDLNRGRPLAKGDTDSVTISFDVSQLSGQSLIIHAEVFIRDMGR
# HPTDNRQTNVIGLKEFTEIDASGGQTNSQIDLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQASYDSQLLSI
# DLYDHNNTMIVMDPVEVTTTLKGGLERTVITQNRQSYDIHTSGHVHQTMEVLDTSMVATASMSRKRRDLKALTANREQYARISNVKAHDLLSDDFKGK
# LPVNRTIVFNCRDPEMTICVRAEMRVHFRPEKSINLNMRYSVDLNEVNAILMDPWEYFVILTDLKLEKKGDPTSTSFSINRSIEPNIISKHLEAGLPI
# WIIIVSVIGGLLLLSAISYLLYKFGFFNRAKKDELDRLVQQNPVEPEAENLNSGGNN]
#
##gff-version	3
##query	GD11233%20[Drosophila%20simulans] 1 589
2R	Scipio	protein_match	11550663	11550862	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 1 67
2R	Scipio	protein_match	11552105	11552131	1.0	+	1	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 68 76
2R	Scipio	protein_match	11554995	11555026	1.0	+	1	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 77 86
2R	Scipio	protein_match	11555082	11555161	1.0	+	2	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 87 113
2R	Scipio	protein_match	11556277	11556391	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 114 151
2R	Scipio	protein_match	11560181	11560292	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 114 150
2R	Scipio	protein_match	11563850	11563978	1.0	+	2	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 152 194
2R	Scipio	protein_match	11564654	11564810	1.0	+	2	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 195 247
2R	Scipio	protein_match	11564877	11565225	1.0	+	1	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 248 363
2R	Scipio	protein_match	11565318	11565491	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 364 421
2R	Scipio	protein_match	11565551	11565642	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 422 452
2R	Scipio	protein_match	11565710	11565911	1.0	+	1	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 453 519
2R	Scipio	protein_match	11565978	11566166	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 520 582
2R	Scipio	protein_match	11566230	11566250	1.0	+	0	gene_id=kassiopeia_gene_id392699 GD11233 [Drosophila simulans];Query=GD11233%20[Drosophila%20simulans] 583 589
# protein sequence = [MSEGSDNNGDPQQQGAEGEAVGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGF
# GKQGFQCQVCSYVVHKRCHEYVTFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHARCKENVPSLCGCDHTER
# RGRIYLEINVKENLLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFM
# GALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQKPSQKKPMVMRSDTNTHTSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGS
# EELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGI
# LYRDLKLDNVLLDADGHVKIADFGMCKENIMGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSY
# PKSLSKEAKEACKGFLTKAAK]
#
##gff-version	3
##query	GD11541%20[Drosophila%20simulans] 1 65
2R	Scipio	protein_match	15393897	15393950	1.0	+	0	gene_id=kassiopeia_gene_id392996 GD11541 [Drosophila simulans];Query=GD11541%20[Drosophila%20simulans] 1 18
2R	Scipio	protein_match	15399255	15399314	1.0	+	0	gene_id=kassiopeia_gene_id392996 GD11541 [Drosophila simulans];Query=GD11541%20[Drosophila%20simulans] 1 20
2R	Scipio	protein_match	15402129	15402269	1.0	+	0	gene_id=kassiopeia_gene_id392996 GD11541 [Drosophila simulans];Query=GD11541%20[Drosophila%20simulans] 19 65
# protein sequence = [MGSAPNELCRLLALPNYQQQQQQRIPATGDVVLGKKHSAVDADPPQWIGMSQPMHRGRSFQSARD]
#
##gff-version	3
##query	GD11607%20[Drosophila%20simulans] 1 1542
2R	Scipio	protein_match	16161055	16161464	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1 137
2R	Scipio	protein_match	16161524	16161674	1.0	+	1	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 138 187
2R	Scipio	protein_match	16161797	16162615	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 188 460
2R	Scipio	protein_match	16162674	16162946	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 461 551
2R	Scipio	protein_match	16163004	16165127	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 552 1259
2R	Scipio	protein_match	16165193	16165313	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1260 1299
2R	Scipio	protein_match	16165378	16165475	1.0	+	2	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1300 1332
2R	Scipio	protein_match	16165539	16165901	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1333 1453
2R	Scipio	protein_match	16165917	16165977	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1454 1473
2R	Scipio	protein_match	16166326	16166386	1.0	+	0	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1454 1473
2R	Scipio	protein_match	16166448	16166651	1.0	+	2	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1474 1541
2R	Scipio	protein_match	16166709	16166710	1.0	+	2	gene_id=kassiopeia_gene_id393058 GD11607 [Drosophila simulans];Query=GD11607%20[Drosophila%20simulans] 1542 1542
# protein sequence = [MSEGSGSENAAAADAAAEAEAASEAALMAEAVAVAYQSDEEEQPEAEDTPEQAGDNQEEDAAEQQDGVELEGDEDADA
# DDAMSVENAENESDSGGNAEETAAADRRQATKKELTQIIDKWEQQQTQNGYDPVPTLRSLAEIFEREKDVYRRKDPDPLDSRHPYRADPSCQYGLLLK
# LLFRKDTFMGKLLNDYLRENYFSRQNVSRSSLELNILACRLILEIMPGMETSAVFQTAEGDGTINRIYSWAEDSIEPLQSYATGLLAEAMEVSDIAIN
# FRDLNIRLVPKMIKRLHMLLAISKSATSDVNTPMHNLSADSSTSGMLSWVACASNASAPQSPQHNGSGLGASSSQHGDASNMSILFENSRDAFSVSRY
# YKRMYIPLHPATADTSQMLIMRFLTSLGEYQEFLAMAFENNVMQLIFGYLENLDRRDTCLAYEVLKYLASLLCHKKFALEFISHGGLELLLKVPRPSL
# ATTGVSIAIYYLAYCEDAMERICSMQRPLISELVRYALWILGRCHDSSKCHATMFFSLSFQFKVILDEFDAQDGLRKLYNVISVLKILDPSNNDSDND
# SDFNEDVECASRQMVRHVCVALKRYMEAHFFYKYNSFLCQTNAASPAPSSAHYFNQNPTVAAKLTFDQLNDQIRTLQEHTSIRAHWQPVDQLMKLGGI
# TMLLRIIAFSYDWVNSGRSETVRSALDVLSVCCIIPRVYVVLCERLLMLDKTTTSGFCSVLGAAAGEISSDAEVIKSALAVLCHCVCSPIIRKDSGTS
# LIKFGTSSRKNKANHKYAEELIERVWESVCSNNGIVVLLSLMQTKGPITDADCIRGMACRALAGLARSDRVRQIVSKLPLFASGQLQTLMRDPILQEK
# RAEHVIFQKYALELLERVSGKTKPLNNPLDPSLSNMHKANVIAQTRIQYNKQQLYQLIFEHLESNGLSQTAQMLQREVGLPLQTPTTRSFHQSPFDYK
# SLPSGSSSLSRNRLRSRMQDVNAAIMGSGDLNRSFGEDSSPAGAGGSNAGDGVSIPNFSSLNTTQTPIKIRRTDRSSVSRSIQKQTMEPGGMSVGLPE
# DGQLHPKRITLNTIVTEYLTNQHSLCNNPVTTCPQFDLYEPHKCPDPKPSRLLSSNYNLTSRHARTQAGFNTSRFDRRYVHTHFSPWRSIRSADYEDL
# EFTCCDLAGKYIIVGTQQGDGRVFNMNDGVEQFFSNCHNFSVDAIKANRAGDLVITSSFWRTPNSILWSIADDEFKLKLRLPDVTYCEFSQTAQDRLL
# GTQNECATLFDINTGSKVASFTPTIPNLYTKNRATLCRTDELILSDGVLWDVRSGKEIHKFDKFNQCISGVFHPNCLEIIANTEVWDLRTFHLLQTVP
# VLDQRNCTFSPMHVIYGASLGADRDHDMETTTYDTSFNVLDAYDYSSIATIDVKRNINDLSVSANGSLIAVVEDYSGYESKQETYVKIYAVGVKKSER
# SEEEDDEEVPESDEDGSDTGSENTFAIGQNLMGFNLLRNLHGSDNDDGDLDEDDDDGEPLDSEDDSDDDDGSDNGDDDFDVLEYFDRSSSDD]
#
##gff-version	3
##query	GD17905%20[Drosophila%20simulans] 1 101
2R	Scipio	protein_match	16491207	16491316	1.0	+	0	gene_id=kassiopeia_gene_id399026 GD17905 [Drosophila simulans];Query=GD17905%20[Drosophila%20simulans] 1 37
2R	Scipio	protein_match	16492651	16492799	1.0	+	1	gene_id=kassiopeia_gene_id399026 GD17905 [Drosophila simulans];Query=GD17905%20[Drosophila%20simulans] 38 86
2R	Scipio	protein_match	16493234	16493259	1.0	+	2	gene_id=kassiopeia_gene_id399026 GD17905 [Drosophila simulans];Query=GD17905%20[Drosophila%20simulans] 87 95
2R	Scipio	protein_match	16496937	16496980	1.0	+	2	gene_id=kassiopeia_gene_id399026 GD17905 [Drosophila simulans];Query=GD17905%20[Drosophila%20simulans] 87 101
# protein sequence = [MVISMDRNKLVWNTSFPSLTVCPHKRIDELKVEEYILTKQRSCRFNYEAEEMMTVPIYSFGLCLSECRMFFALRVCGC
# VPHFYRNRWWSKVKVEIDNLLRN]
#
##gff-version	3
##query	GD11711%20[Drosophila%20simulans] 1 481
2R	Scipio	protein_match	17315697	17315718	1.0	+	0	gene_id=kassiopeia_gene_id393156 GD11711 [Drosophila simulans];Query=GD11711%20[Drosophila%20simulans] 1 7
2R	Scipio	protein_match	17315942	17316078	1.0	+	2	gene_id=kassiopeia_gene_id393156 GD11711 [Drosophila simulans];Query=GD11711%20[Drosophila%20simulans] 8 53
2R	Scipio	protein_match	17318150	17318286	1.0	+	2	gene_id=kassiopeia_gene_id393156 GD11711 [Drosophila simulans];Query=GD11711%20[Drosophila%20simulans] 8 53
2R	Scipio	protein_match	17318336	17319409	1.0	+	0	gene_id=kassiopeia_gene_id393156 GD11711 [Drosophila simulans];Query=GD11711%20[Drosophila%20simulans] 54 411
2R	Scipio	protein_match	17319555	17319764	1.0	+	0	gene_id=kassiopeia_gene_id393156 GD11711 [Drosophila simulans];Query=GD11711%20[Drosophila%20simulans] 412 481
# protein sequence = [MTAEINKGPLLGMRHIQTLLIFFNITCLYIGRLNVGVSVVAMTNADSTNPDFPEYDWMEAEKSYIFSSFFWGYILTQF
# LGGYLCKRFGVKGVMFWGVFVSGVCSALTPLFIGFGGWKAYCGIRVIMGLAQGMVFPCIHHHLAKWSPPAERNRLGALSHTGMDCGNVSAMFLSGMIA
# KSAIGWPGISYVSAGLAFAWCAFWFVFGADNAVESRYISKEELHYIESSLKHSEGYHKTVIPVPWMAIWTSAPFLALTLTRCCATWGLSTLQAQIPTY
# MNGVLDLDMKSNAFFSALPFLAMWIMSYVYLITADVLLAGNRLSLTALRKTFNSLAFWIPCATLIGIGFLDQEQKNLAIALMTISVGINSGATIGSSL
# NTIDLSPNHASILMGILNTAATVVPIVTPLVVGVIVHEDNNRAEWQIVFIIAAVLFFVGNSVFLYFGTAVSQPWDAEDYLTVKVPELAISPAIHEAGK
# GIDGPSEKSLI]
#
##gff-version	3
##query	GD11871%2C%20partial%20[Drosophila%20simulans] 1 149
2R	Scipio	protein_match	18888825	18888914	1.0	+	0	gene_id=kassiopeia_gene_id393309 GD11871, partial [Drosophila simulans];Query=GD11871%2C%20partial%20[Drosophila%20simulans] 1 30
2R	Scipio	protein_match	18903504	18903721	1.0	+	0	gene_id=kassiopeia_gene_id393309 GD11871, partial [Drosophila simulans];Query=GD11871%2C%20partial%20[Drosophila%20simulans] 31 103
2R	Scipio	protein_match	18904142	18904280	1.0	+	1	gene_id=kassiopeia_gene_id393309 GD11871, partial [Drosophila simulans];Query=GD11871%2C%20partial%20[Drosophila%20simulans] 104 149
2R	Scipio	protein_match	18904421	18904559	1.0	+	1	gene_id=kassiopeia_gene_id393309 GD11871, partial [Drosophila simulans];Query=GD11871%2C%20partial%20[Drosophila%20simulans] 104 149
# protein sequence = [TTTSDKHPKTKIWVAQSTENPAPTPKQAPKMCSRNIKISVVLFLVLIPIFAALPHNHNLSKRSNFFDLECKGIFNKTM
# FFRLDRICEDCYQLFRETSIHRLCKKDCFDSKWFGECLKVLLIPEEEISNLQHFLRVVNGSPISFNMGPQT]
#
##gff-version	3
##query	GD11923%2C%20partial%20[Drosophila%20simulans] 1 233
2R	Scipio	protein_match	19580790	19580969	0.966	+	0	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 1 60
2R	Scipio	protein_match	19581027	19581285	0.966	+	0	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 61 146
2R	Scipio	protein_match	19581335	19581386	0.966	+	2	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 147 164
2R	Scipio	protein_match	19582122	19582180	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 165 183
2R	Scipio	protein_match	19584847	19584905	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 165 183
2R	Scipio	protein_match	19586853	19586911	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 165 183
2R	Scipio	protein_match	19587459	19587474	0.966	+	2	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 184 189
2R	Scipio	protein_match	19587557	19587586	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 190 199
2R	Scipio	protein_match	19588014	19588053	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 200 212;Mismatches=200 201 202 203
2R	Scipio	protein_match	19588971	19588997	0.966	+	0	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 213 221
2R	Scipio	protein_match	19593495	19593520	0.966	+	0	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 222 230
2R	Scipio	protein_match	19593581	19593590	0.966	+	1	gene_id=kassiopeia_gene_id393357 GD11923, partial [Drosophila simulans];Query=GD11923%2C%20partial%20[Drosophila%20simulans] 231 233
# protein sequence = [GKHRTAQQDAIFVAFMERHPIISKNYLKGDKQAAEAAWRRLTNELNSVGPPIKEVSEWKRVWKDWKSCIRKKITSNRL
# ENSKATGKGSLYQDTLTPLEDAVAVICDLYDMADTTTEGCPKDQAEMSHGVSLKFIKTDQDDSTVTDNQDYEDEDCSINIRRLGGHYPRQENGSIESL
# EASRVIGGTFGGRYIRWKLIWWYxxxxIHLVEANLVVHLVEANLVVLKEEASLGYTL]
#
##gff-version	3
##query	GD12102%20[Drosophila%20simulans] 1 1012
3L	Scipio	protein_match	20953267	20953425	1.0	-	0	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 1 53
3L	Scipio	protein_match	20952528	20953067	1.0	-	0	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 54 233
3L	Scipio	protein_match	20951617	20952469	1.0	-	0	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 234 517
3L	Scipio	protein_match	20950809	20951548	1.0	-	2	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 518 764
3L	Scipio	protein_match	20950194	20950752	1.0	-	0	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 765 950
3L	Scipio	protein_match	20948983	20949514	1.0	-	0	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 765 941
3L	Scipio	protein_match	20948743	20948927	1.0	-	2	gene_id=kassiopeia_gene_id393529 GD12102 [Drosophila simulans];Query=GD12102%20[Drosophila%20simulans] 951 1012
# protein sequence = [MNVFTFLFIISAICSLDAFKTAVVPNEFIVHFHSKYLAPVRESYIAAKLLGSNVTNWEIVPRLNVAWQYPSDFDVLRV
# FDDNESSSAFIIERLLTHPSVKAVVPQRSVRRILNYDPYSNLTYVHRHPQGVLRNRNTNNDRHRQVCSVLHANILWKLGITGKGVKVAIFDTGLTKNH
# PHFRNVKERTNWTNEKSLDDRVSHGTFVAGVIASSRECLGFAPDADLYIFKVFTNSQVSYTSWFLDAFNYAIYRKINILNLSIGGPDFMDSPFVEKVL
# ELSANNVIMISAAGNDGPLYGTLNNPGDQSDVVGVGGIQFDDKIAKFSSRGMTTWELPFGYGRMGLDIVTYGSQVEGSDVRKGCRRLSGTSVSSPVVA
# GAAALLISGAFQKMDFINPASLKQVLIESAEKLPHYNMFEQGAGKLNLLKSMQLLLSYKPKITLIPAYLDFTENYMWPYSSQPLYYGSSVAIANVTIL
# NGISVTSQIVGIPKWIPDIENQGQFLQVSTQVSPIVWPWTGWMSIYIAVKKEGDNFEGVCKGSITLVVESFKQSTNETYVTEVDFPLTIKVTPKPPRN
# KRILWDQYHSLRYPPRYIPRDDLKVKLDPLDWRADHIHTNFKEMYTHLRNVGYYIDVLREPFTCFNASDYGALLIVDPERGFADEEINALQENVYKRG
# LNVVVFGDWYNTTVMKKIKFFDENTRQWWTPDTGGANIPALNDLLKPFGIAFGDFVGEGHFKLGDHSMYYASGATIIKFPMNPGDILVGTKLNDQGLS
# IINPKTPSKAAKVDVPIFGMFQTKANSIQSNEEIIGNAESNLAEAIPTDYSTFKNRVLLLRKKERSISFAKSNNHETKNEGRIAVYGDSNCLDSTHLE
# KACYWLLITFLDFAINSHKSSLLQNLNRISEFHKLERAPLPLRISRSILKSGSQDNTCEQFEWLTPTKRNNVEQRKSSILDVATLENEENEINLMKNL
# LDEEIAKLLQNNDYLTGMQSADSLMTPIIFLIILSLIVIILFVLFLKRRFIL]
#
##gff-version	3
##query	GD12287%20[Drosophila%20simulans] 1 516
3L	Scipio	protein_match	18618265	18618570	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 1 102
3L	Scipio	protein_match	18616903	18617220	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 103 208
3L	Scipio	protein_match	18615470	18616026	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 394
3L	Scipio	protein_match	18614117	18614676	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 395
3L	Scipio	protein_match	18612566	18613128	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 396
3L	Scipio	protein_match	18611317	18611876	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 395
3L	Scipio	protein_match	18610142	18610701	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 395
3L	Scipio	protein_match	18609177	18609736	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 395
3L	Scipio	protein_match	18607837	18608396	1.0	-	0	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 209 395
3L	Scipio	protein_match	18607619	18607773	1.0	-	1	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 396 446
3L	Scipio	protein_match	18607184	18607392	1.0	-	2	gene_id=kassiopeia_gene_id393712 GD12287 [Drosophila simulans];Query=GD12287%20[Drosophila%20simulans] 447 516
# protein sequence = [MELMARLGKINGFTHARNKGSAHETIVMNKQRQNDLIADLLTRPKPHIYSQHIAYINFTRFHLPKPIYINLIRDPIDR
# IISWHYYIRAPWYYRDMQAKLGDKLWRLNPKFLNNTKFHFRDIIFYNRVPKTGSETLIELMIQLGKKNDFQNERSPFSKPTGIYWSVERQKEEATRIL
# ELQEEPAFVYVEHMNYMNIRPFHLPQPIYINMMSSLNVRDLNNTRKAQMELVFFNRVPKVGSQTFMELLRRLSERNNFQFHRDAVQKVETIRLAEDQQ
# QEMAEVISELPEPSVFIKHVCFTNFTKFNLPRPIYLNVVRDPVERVISWFYYVRAPWYFVERKAAFPDLPLPHPAWLKKDFETCVLNGDQECTYTQGV
# TVEGIGDHRRQSLFFCGHDYECTPFNTVGALERAKFAVEQQYAVVGVLEDLNTTLSVLEKYVPRFFEGVRDIYATSAEYLTKINKNNFKPPVSEHVKD
# IVRRNFTNEIEFYQFCRQRLHKQYLAAHLPQRIITDSAHLPGLIGN]
#
##gff-version	3
##query	GD12651%20[Drosophila%20simulans] 1 616
3L	Scipio	protein_match	13042721	13042780	1.0	-	0	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 1 20
3L	Scipio	protein_match	13029716	13029757	1.0	-	0	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 21 34
3L	Scipio	protein_match	13015466	13015514	1.0	-	0	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 35 50
3L	Scipio	protein_match	12984898	12985191	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 51 148
3L	Scipio	protein_match	12981229	12981513	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 51 145
3L	Scipio	protein_match	12978058	12978339	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 51 144
3L	Scipio	protein_match	12977696	12977995	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 145 244
3L	Scipio	protein_match	12973799	12973933	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 245 289
3L	Scipio	protein_match	12955773	12955852	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 290 316
3L	Scipio	protein_match	12933248	12933391	1.0	-	0	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 317 364
3L	Scipio	protein_match	12932895	12933171	1.0	-	0	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 365 456
3L	Scipio	protein_match	12932663	12932761	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 457 489
3L	Scipio	protein_match	12931737	12931814	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 490 515
3L	Scipio	protein_match	12930104	12930280	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 516 574
3L	Scipio	protein_match	12929908	12930032	1.0	-	2	gene_id=kassiopeia_gene_id394063 GD12651 [Drosophila simulans];Query=GD12651%20[Drosophila%20simulans] 575 616
# protein sequence = [MVHIIELVGQPKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSVAPKIDRKNIRTYNFKSGEPIFLDINIS
# GEPAPDVNWNQNNKSVQTTSFSHIENIPYNTKYINNNPERKDTGLYKISAHNLYGQDQVEFQINIITKPGKPEGPLEVSEVHKDGCKLKWKKPKDDGG
# EPVESYLVEKFDPDTGIWLPVGRSDVPEYNVDGLVPGHDYKFRVKAINKEGESEPLETLGSIIAKDPFKHLDRKLFVGMLSKQQTEDDVRQIFHPFGT
# IEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGAYAQQQQQAALM
# AAAATAPGSAAAYMNPMAALATQIPHGLNGTGQPPSLPSPTMPNFNMGANTPNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGLPN
# GDAATLQHAFPGLPPFPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRAT
# NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY]
#
##gff-version	3
##query	GD12685%20[Drosophila%20simulans] 1 393
3L	Scipio	protein_match	12340661	12341635	1.0	-	0	gene_id=kassiopeia_gene_id394096 GD12685 [Drosophila simulans];Query=GD12685%20[Drosophila%20simulans] 1 325
3L	Scipio	protein_match	12339313	12340287	1.0	-	0	gene_id=kassiopeia_gene_id394096 GD12685 [Drosophila simulans];Query=GD12685%20[Drosophila%20simulans] 1 325
3L	Scipio	protein_match	12339003	12339158	1.0	-	0	gene_id=kassiopeia_gene_id394096 GD12685 [Drosophila simulans];Query=GD12685%20[Drosophila%20simulans] 326 377
3L	Scipio	protein_match	12338892	12338939	1.0	-	0	gene_id=kassiopeia_gene_id394096 GD12685 [Drosophila simulans];Query=GD12685%20[Drosophila%20simulans] 378 393
# protein sequence = [MEFEDYFKYFDSSLRLAMIPRFKWSQRSAEEDLYPTFRRAFFLLGSFCLAYQCIGVIIDWSIYGRKAADTQSFVAEIS
# EATGALMLVAVGFFNICVLSNRRPEIEILLTDLRELYPRPRDRNYRQQYYFQMANGLMKFEFIYFWMFTMYYNIAPLVVMMYEYQMDGMEMRYKTQIN
# TWYPWNVYGSAIGYGVGHFATLIASIEGVAFSLGTHNIISIITYQLKLHFDAISNQLLKLDSRHPGANQELRRLIAYHSHVIQIANDFNEIMNFSFLG
# GLFFSTTALCMTSVAIVLLDLQSAIKCINGLIAFIVYNFVICFLGTEFTLASGKVLPAAFYNNWYEGDLAYRRMLLILMMRATKPYMWRTYKLAPVSI
# TTYMATLKFSYQMFTCVRSLK]
#
##gff-version	3
##query	GD12773%20[Drosophila%20simulans] 1 316
3L	Scipio	protein_match	11180174	11180197	1.0	-	0	gene_id=kassiopeia_gene_id394182 GD12773 [Drosophila simulans];Query=GD12773%20[Drosophila%20simulans] 1 8
3L	Scipio	protein_match	11176570	11177223	1.0	-	0	gene_id=kassiopeia_gene_id394182 GD12773 [Drosophila simulans];Query=GD12773%20[Drosophila%20simulans] 9 226
3L	Scipio	protein_match	11176404	11176503	1.0	-	0	gene_id=kassiopeia_gene_id394182 GD12773 [Drosophila simulans];Query=GD12773%20[Drosophila%20simulans] 227 259
3L	Scipio	protein_match	11175807	11175976	1.0	-	2	gene_id=kassiopeia_gene_id394182 GD12773 [Drosophila simulans];Query=GD12773%20[Drosophila%20simulans] 260 316
3L	Scipio	protein_match	11175490	11175659	1.0	-	2	gene_id=kassiopeia_gene_id394182 GD12773 [Drosophila simulans];Query=GD12773%20[Drosophila%20simulans] 260 316
# protein sequence = [MARIVESNFVPLAVGVVAVLAGALIVHYLLNKKSTKPRREPNRTARLRTLVDPNDKYLLPLIEKENLSHDTRRFRFGL
# PSKQHVLGLPVGQHIHLIATIDNELVIRPYTPISSDEDVGYVDLVVKVYFKDTHPKFPAGGKMTQHLEQLELGDKISFRGPSGRLQYLGNGTFSIKKL
# RKDPPKHVTAKRVNMIAGGTGITPMLQLAREVLKRSDKDKTELALLFANQSEKDILLRAELDELAQKHPDQFKVWYTVDKANEGWQYSVGFINEEMIA
# AHLLPAKDDTIVLLCGPPPMINFACNPALDKLGYHPDTRFAY]
#
##gff-version	3
##query	GD12789%20[Drosophila%20simulans] 1 350
3L	Scipio	protein_match	10989749	10989834	1.0	-	0	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 1 29
3L	Scipio	protein_match	10989603	10989687	1.0	-	1	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 30 57
3L	Scipio	protein_match	10989020	10989092	1.0	-	1	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 30 53
3L	Scipio	protein_match	10987442	10987584	1.0	-	0	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 58 105
3L	Scipio	protein_match	10986892	10987375	1.0	-	1	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 106 266
3L	Scipio	protein_match	10986623	10986831	1.0	-	0	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 267 336
3L	Scipio	protein_match	10986464	10986506	1.0	-	1	gene_id=kassiopeia_gene_id394198 GD12789 [Drosophila simulans];Query=GD12789%20[Drosophila%20simulans] 337 350
# protein sequence = [MNTLMKIQLFRPVFRITLRNYGKAERFMWCQKEYARAPKVVCLDGNEIPVIGLGTYNSPKGQVTEAVKVAIDAGYRHI
# DCAYVYQNEDEVGDGVEAKIKEGVVKREDLFITSKLWNTFHRPDLVKSALENTLSSLKLKYLDLYLIHWPMGYKEGCDLFPTDKDGKTLYSPVDYVDT
# WKAMEKLVQEGLVKSIGVSNFNRRQIERVLEVATIPPVTNQIECHPYLTQKKLIDFCKSKDITITAYSPLGSPNRPWAKAGDPVILEEAKIKEIAAKK
# KKTPGQILIRYQVQRANIVIPKSVTKDRIESNFQVFDFELTPEEIEIIESFECNGRLVPLLKDAGTHKYYPFHDEY]
#
##gff-version	3
##query	GD12869%20[Drosophila%20simulans] 1 581
3L	Scipio	protein_match	9578568	9578793	1.0	-	0	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 1 75
3L	Scipio	protein_match	9578179	9578331	1.0	-	2	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 76 126
3L	Scipio	protein_match	9577804	9578070	1.0	-	2	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 127 215
3L	Scipio	protein_match	9577363	9577491	1.0	-	2	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 216 258
3L	Scipio	protein_match	9577252	9577350	1.0	-	2	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 216 248
3L	Scipio	protein_match	9573855	9574089	1.0	-	2	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 249 327
3L	Scipio	protein_match	9572950	9573565	1.0	-	1	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 328 532
3L	Scipio	protein_match	9572733	9572879	1.0	-	0	gene_id=kassiopeia_gene_id394275 GD12869 [Drosophila simulans];Query=GD12869%20[Drosophila%20simulans] 533 581
# protein sequence = [MKFVILLCVLSALLLQIEASPLQRLSRSERAVSRQQTVNNEVAPAVAPASDDDDDDDDEDDDDEPDLGDLIDDDDDDD
# EEEDDDEDEEDDTPQGQAAPAATASDDDEEEDDDDDDYLDRLFDDILGDDEDEDDDDETPAATAQQSAVAAAPAQNLDEVAPAAASSVSAGISDGVDL
# PAESGNAAEVLAAGNAADESVSAAVAPAQNAAASSSNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREARDLKNNVIDMSTDAFQARHNHFIDAI
# FSRINRIVSENYDPYVVNLTGRSALPNAASGSNVKAANKKQSTSSKVGGHKKLKNTRSEPRSGNSNQEAREAAVKLQEQLTQLQSELAIKAVEKRPNP
# TSPATESESDSGSPKAETRTVSGPKTGQKKSSNKQNTKKASGLKSGNYNQPAGVSKAGASSNGAVEKLQKAEGRLSGLASLKRVGNVKVISDAEGRNS
# TIKAKFTLGPLVLRVEKSFKKGSVRSVKSATARTNEMMGRIKFSVLDDRATLMSIKVQQPKQVEVESKDNHDRTREFVWRRTPKIAKLVNEKLKLAAE
# SLFAPQGVEVVRL]
#
##gff-version	3
##query	resistance%20to%20dieldrin%20[Drosophila%20simulans] 1 256
3L	Scipio	protein_match	8567991	8568130	1.0	-	0	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 1 47
3L	Scipio	protein_match	8561713	8561810	1.0	-	1	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 48 79
3L	Scipio	protein_match	8561352	8561419	1.0	-	2	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 80 102
3L	Scipio	protein_match	8559432	8559499	1.0	-	2	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 80 102
3L	Scipio	protein_match	8554690	8554916	1.0	-	0	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 103 178
3L	Scipio	protein_match	8553241	8553323	1.0	-	1	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 179 205
3L	Scipio	protein_match	8551582	8551733	1.0	-	2	gene_id=kassiopeia_gene_id394343 resistance to dieldrin [Drosophila simulans];Query=resistance%20to%20dieldrin%20[Drosophila%20simulans] 206 256
# protein sequence = [MSDSKMDKLARMAPLPRTPLLTIWLAINMALIAQETGHKRIHTVQAATGGGSMLGDVNISAILDSFSVSYDKRVRPNY
# GGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRS
# IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGTPIH]
#
##gff-version	3
##query	GD13149%20[Drosophila%20simulans] 1 67
3L	Scipio	protein_match	5633112	5633116	1.0	-	0	gene_id=kassiopeia_gene_id394544 GD13149 [Drosophila simulans];Query=GD13149%20[Drosophila%20simulans] 1 2
3L	Scipio	protein_match	5631966	5632161	1.0	-	1	gene_id=kassiopeia_gene_id394544 GD13149 [Drosophila simulans];Query=GD13149%20[Drosophila%20simulans] 3 67
3L	Scipio	protein_match	5630491	5630686	1.0	-	1	gene_id=kassiopeia_gene_id394544 GD13149 [Drosophila simulans];Query=GD13149%20[Drosophila%20simulans] 3 67
# protein sequence = [MRWKTSDGQAAEAEGKLNNVGSENEAIAVRGSYRFVGDDGQTYEVQYIADENGFQPQGAHLPVAPVA]
#
##gff-version	3
##query	GD13160%20[Drosophila%20simulans] 1 272
3L	Scipio	protein_match	5527717	5527976	1.0	-	0	gene_id=kassiopeia_gene_id394553 GD13160 [Drosophila simulans];Query=GD13160%20[Drosophila%20simulans] 1 87
3L	Scipio	protein_match	5526897	5527144	1.0	-	0	gene_id=kassiopeia_gene_id394553 GD13160 [Drosophila simulans];Query=GD13160%20[Drosophila%20simulans] 1 83
3L	Scipio	protein_match	5526281	5526836	1.0	-	1	gene_id=kassiopeia_gene_id394553 GD13160 [Drosophila simulans];Query=GD13160%20[Drosophila%20simulans] 88 272
# protein sequence = [MKVLVVLVLAMAAASAGLLPQITPVHPRDRITKPTINGRITNGKNAVENQFPYQVGLSFIGLKGSWWCGGSIIDNSWV
# LTAAHCTAGSSSVKVYYGSTVRTSPKLTHTVSSSNFVQHASYNSATLKNDISLIKTPSVTFTASINRIALPAIASSYSTYAGQTAVASGWGRTSDSAT
# AVATKLQYADLKVIDNSVCQQFYGSSTVTSGVICVASVNEVSTCQGDSGGPLALDSKLIGVTSFVYAKGCEKNAPAGFTRVTSYLNWIKTESGVYA]
#
##gff-version	3
##query	GD13229%20[Drosophila%20simulans] 1 2433
3L	Scipio	protein_match	4351164	4352274	1.0	-	0	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1 370
3L	Scipio	protein_match	4348996	4351104	1.0	-	2	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 371 1073
3L	Scipio	protein_match	4348550	4348745	1.0	-	2	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1074 1139
3L	Scipio	protein_match	4347712	4347910	1.0	-	2	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1074 1140
3L	Scipio	protein_match	4347209	4347326	1.0	-	1	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1141 1179
3L	Scipio	protein_match	4346864	4346942	1.0	-	1	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1141 1166
3L	Scipio	protein_match	4343204	4346802	1.0	-	0	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 1180 2379
3L	Scipio	protein_match	4342982	4343144	1.0	-	1	gene_id=kassiopeia_gene_id394620 GD13229 [Drosophila simulans];Query=GD13229%20[Drosophila%20simulans] 2380 2433
# protein sequence = [MMVGPSGSGKSTAWKTLLKALERFEGVEGVAHVIDPKAISKEALYGVLDPNTREWTDGLFTHILRKIIDNVRGEINKR
# QWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRVMFEVQDLKFATLATVSRCGMVWFSEDVLSTEMIFENYLSRLRSIPLEDGDEDFVG
# VIKPAKDKEEEVSPSLQVQRDIALLLLPFFSADGIVVRTLEYAMDQEHIMDFTRLRALSSLFSMLNQAARNVLTFNAQHPDFPCSADQLEHYIPKALV
# YSVLWSFAGDAKLKVRIDLGDFVRSVTTVPLPGAAGAPIIDYEVNMSGDWVPWSNKVPVIEVETHKVASPDIVVPTLDTVRHESLLYTWLAEHKPLVL
# CGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEYRKTPNGVVLSPVQIGKWLVLFCDEINLPDMDSYGTQRVISFLRQLVEHKG
# FYRASDQAWVSLERIQFVGACNPPTDPGRKPLSHRFLRHVPIIYVDYPGETSLKQIYGTFSRAMLRLMPALRGYAEPLTNAMVEFYLASQDRFTQDMQ
# PHYVYSPREMTRWVRGICEAIRPLDSLPVEGLVRLWAHEALRLFQDRLVDDSERRWTNENIDLVGQKHFPGINQEEALQRPILYSNWLSKDYMPVNRE
# ELREYVHARLKVFYEEELDVPLVLFDEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAWMNGLSIFQIKVHNKYTSEDFDEDLRCVLRRSGC
# KDEKIAFILDESNVLDSGFLERMNTLLANGEVPGLFEGDEYTTLMTQCKEGAQREGLMLDSSDELYKWFTQQVMRNLHVVFTMNPSTDGLKDRAATSP
# ALFNRCVLNWFGDWSDSALFQVGKEFTTRVDLEKPNWHAPDFFPSVCPLVPANPTHRDAVINSCVYVHQTLHQANARLAKRGGRTMAVTPRHYLDFIH
# HFVKLYNEKRSDLEEQQLHLNVGLNKIAETVEQVEEMQKSLAVKKQELQAKNEAANAKLKQMFQDQQEAEKKKIQSQEIQIRLADQTVKIEEKRKYVM
# ADLAQVEPAVIDAQAAVKSIRKQQLVEVRTMANPPSVVKLALESICLLLGENATDWKSIRAVIMRENFINSIVSNFGTENITDDVREKMKSKYLSNPD
# YNFEKVNRASMACGPMVKWAIAQIEYADMLKRVEPLREELRSLEEQADVNLASAKETKDLVEQLERSIAAYKEEYAQLISQAQAIKTDLENVQAKVDR
# SIALLKSLNIERERWESTSETFKSQMSTIIGDVLLSAAFIAYGGYFDQHYRLNLFTTWSQHLQAASIQYRADIARTEYLSNPDERLRWQANALPTDDL
# CTENAIMLKRFNRYPLIIDPSGQATTFLLNEYAGKKITKTSFLDDSFRKNLESALRFGNPLLVQDVENYDPILNPVLNRELRRTGGRVLITLGDQDID
# LSPSFVIFLSTRDPTVEFPPDICSRVTFVNFTVTRSSLQSQCLNQVLKAERPDIDEKRSDLLKLQGEFRLRLRQLEKSLLQALNDAKGKILDDDSVIT
# TLETLKKEAYDINQKVDETDKVIAEIETVSQQYLPLSVACSNIYFTMDSLNQVHFLYHYSLKMFLDIFSTVLYNNPKLEGRTDHSERLGIVTRDLFQV
# CYERVARGMIHNDRLTFALLMCKIHLKGTSESNLDAEFNFFLRSREGLLANPTPVEGLSAEQIESVNRLALRLPIFRKLLEKVRSIPELGAWLQQSSP
# EQVVPQLWDESKALSPIASSVHQLLLIQAFRPDRVIAAAHNVVNTVLGEDFMPNAEQELDFTSVVDKQLNCNTPALLCSVPGFDASGRVDDLAAEQNK
# QISSIAIGSAEGFNQAERAINMACKTGRWVLLKNVHLAPQWLVQLEKKMHSLQPHSGFRLFLTMEINPKVPVNLLRAGRIFVFEPPPGIRANLLRTFS
# TVPAARMMKTPSERARLYFLLAWFHAIVQERLRYVPLGWAKKYEFNESDLRVACDTLDTWIDTTAMGRTNLPPEKVPWDALVTLLSQSIYGGKIDNDF
# DQRLLTSFLKKLFTARSFEADFALVANVDGASGGLRHITMPDGTRRDHFLKWIENLTDRQTPSWLGLPNNAEKVLLTTRGTDLVSKLLKMQQLEDDDE
# LAYSVEDQSEQSAVGRGEDGRPSWMKTLHNSATAWLELLPKNLQVLKRTVENIKDPLYRYFEREVTSGSRLLQTVILDLQDVVLICQGEKKQTNHHRS
# MLSELVRGIIPKGWKRYTVPAGCTVIQWITDFSNRVQQLQKVSQLVSQAGAKELQGFPVWLGGLLNPEAYITATRQCVAQANSWSLEELALDVTITDA
# GLKNDQKDCCFGVTGLKLQGAQCKNNELLLASTIMMDLPVTILKWIKISSEPRISKLTLPVYLNSTRTELLFTVDLAVAAGQDSHSFYERGVAVLTST
# ALN]
#
##gff-version	3
##query	GD13314%20[Drosophila%20simulans] 1 300
3L	Scipio	protein_match	3439556	3440363	1.0	-	0	gene_id=kassiopeia_gene_id394703 GD13314 [Drosophila simulans];Query=GD13314%20[Drosophila%20simulans] 1 269
3L	Scipio	protein_match	3407190	3407266	1.0	-	2	gene_id=kassiopeia_gene_id394703 GD13314 [Drosophila simulans];Query=GD13314%20[Drosophila%20simulans] 270 295
3L	Scipio	protein_match	3406901	3406992	1.0	-	2	gene_id=kassiopeia_gene_id394703 GD13314 [Drosophila simulans];Query=GD13314%20[Drosophila%20simulans] 270 300
# protein sequence = [MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQ
# IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
# NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQLNIDK
# QQQQQHQQQQQHIGPKTQQQHEYRTL]
#
##gff-version	3
##query	GD13376%20[Drosophila%20simulans] 1 642
3L	Scipio	protein_match	2245559	2245594	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 1 12
3L	Scipio	protein_match	2240685	2240820	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 13 57
3L	Scipio	protein_match	2238361	2238698	1.0	-	2	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 58 170
3L	Scipio	protein_match	2235612	2235860	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 171 253
3L	Scipio	protein_match	2234726	2234971	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 171 252
3L	Scipio	protein_match	2234328	2234584	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 254 339
3L	Scipio	protein_match	2234013	2234267	1.0	-	1	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 340 424
3L	Scipio	protein_match	2233647	2233888	1.0	-	1	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 425 504
3L	Scipio	protein_match	2229056	2229180	1.0	-	2	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 505 546
3L	Scipio	protein_match	2228572	2228791	1.0	-	0	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 547 619
3L	Scipio	protein_match	2228338	2228405	1.0	-	2	gene_id=kassiopeia_gene_id394765 GD13376 [Drosophila simulans];Query=GD13376%20[Drosophila%20simulans] 620 642
# protein sequence = [MLPTNVMSFMKKMVATDEQTSERQQHAADSGGGASQTGALNKMKATISSSLLTVTDKVNKMSPRPSLVPTDADTSGSY
# GSPSYQSQQQQQDYGSSLNNNNNNSTGGGTATAGGGGGGAAAKQEPGRRAGACRVCLKSFKPDDYHKTCFECQQRVCEDCASYSKLDEHEDATMWRCS
# VCRRKMASRVCIPQDSTDSMLDVPVLEALQRRHSDAKLGSSTQTLAPSNGAALAPPRSPELRRHSDVSPASLKELERQLKGGRSMAPSRSNSPPRGEG
# PDGQPPFGAPLSRMQSRRGSRVARQHSYDDDMKTGPVGGSMGGGGPALGLGADGAGLGIPAMPRRKSAYDVFAPGLTQGGATPATQLQRSPGEGGIMP
# PIQLPGSRRPSFRVPHPSEDIQNDDSPGSPDKGSPVLTVDDDRRMRRRGSQLPDIAMLQNRGALPAVPPSSIPPPMASFTGPNLEDLEAPRRQTSMDG
# EAIRIVIHDVDSGPICASKRRIILRRDPTDKAHRTRGFGMRVVGGKTGADGRLFAYVVWTVPGGAAEKNGLQQGDKILEWNGMSLIDRSFEEVCSIMD
# RTGDVVELLVEHATDFRMCDLFDENLPPGNAGGQSGPRRSGDGPVGLGLIAEPETTTDKSPASPTRRKLPKTPV]
#
##gff-version	3
##query	GD13582%20[Drosophila%20simulans] 1 333
3L	Scipio	protein_match	538817	539256	1.0	+	0	gene_id=kassiopeia_gene_id394962 GD13582 [Drosophila simulans];Query=GD13582%20[Drosophila%20simulans] 1 147
3L	Scipio	protein_match	539316	539673	1.0	+	1	gene_id=kassiopeia_gene_id394962 GD13582 [Drosophila simulans];Query=GD13582%20[Drosophila%20simulans] 148 266
3L	Scipio	protein_match	540694	541063	1.0	+	1	gene_id=kassiopeia_gene_id394962 GD13582 [Drosophila simulans];Query=GD13582%20[Drosophila%20simulans] 148 270
3L	Scipio	protein_match	541126	541326	1.0	+	0	gene_id=kassiopeia_gene_id394962 GD13582 [Drosophila simulans];Query=GD13582%20[Drosophila%20simulans] 267 333
# protein sequence = [MYRNILCLALGLIIGIQLTDFLEYFQLTDSQFASTAITQLEEGATPQLATEEELALWLQNETRVLCMVLTLPKNHQSR
# VRRVKGTWGRRCNKLIFISSQEDRELGVIDVGVPEERNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIMENLRFMLYPYDPEAALYFGHRFRTT
# FPQGYMSGGAGYVMSRDALRRLNLFAFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFMLPTFPTDNWLPKLTFRSDCCAAS
# AISFHYVKDFEFELFEFFLYYLRVFGLHRTPRALPSRLGFRQMNERLQHWSQQVTDNKN]
#
##gff-version	3
##query	GD14019%20[Drosophila%20simulans] 1 205
3L	Scipio	protein_match	6970234	6970311	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 1 26
3L	Scipio	protein_match	6976427	6976498	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 1 24
3L	Scipio	protein_match	6980617	6980667	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 27 43
3L	Scipio	protein_match	6981108	6981158	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 27 43
3L	Scipio	protein_match	6981279	6981419	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 44 90
3L	Scipio	protein_match	6981480	6981614	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 91 135
3L	Scipio	protein_match	6981669	6981845	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 136 194
3L	Scipio	protein_match	6981905	6981937	1.0	+	0	gene_id=kassiopeia_gene_id395384 GD14019 [Drosophila simulans];Query=GD14019%20[Drosophila%20simulans] 195 205
# protein sequence = [MRAALAIRRDCPPPGSIPGRQPHPAPMIFVYVAIVVVKLIILFDHMGCWNCLFRSYMIIALTVNVLMVPLLIVGFIFI
# YSNLSGEIRIVIYATVLFLATWLQMMLTILFAQQYQIVGDVLRIWMNHKSLEFYERRCQCCGVLGPDDYKLGDLKIPKSCYKNGSKMEEDLYRSGCST
# HSIKPSSPIIQVISFVIQSYALRYSSLSC]
#
##gff-version	3
##query	GD14130%20[Drosophila%20simulans] 1 225
3L	Scipio	protein_match	8240865	8241409	1.0	+	0	gene_id=kassiopeia_gene_id395491 GD14130 [Drosophila simulans];Query=GD14130%20[Drosophila%20simulans] 1 182
3L	Scipio	protein_match	8241472	8241625	1.0	+	1	gene_id=kassiopeia_gene_id395491 GD14130 [Drosophila simulans];Query=GD14130%20[Drosophila%20simulans] 183 233
3L	Scipio	protein_match	8242266	8242395	1.0	+	1	gene_id=kassiopeia_gene_id395491 GD14130 [Drosophila simulans];Query=GD14130%20[Drosophila%20simulans] 183 225
# protein sequence = [MLRCLILLALGVFVVIRILGIRGDCNVCASVSNVACISNTSYQFCSGSALPAGPVYTCPTGSYCTANDVTCNTDVAQR
# SCIGCGTCDSGNTFACLTARTFALCLGTSTPSQIVGSCGSSYVCDFNNPYICGSPAAGSQATCPGDGSGTGLDVSATTPTTYCSVVQQHGRFPYGIDL
# NTTCRHYFRYVFCYFSGVSFYGNVYSCPGSTIFDSTTEMCTIQTDVQAR]
#
##gff-version	3
##query	GD17946%20[Drosophila%20simulans] 1 259
3L	Scipio	protein_match	11014422	11014611	1.0	+	0	gene_id=kassiopeia_gene_id399054 GD17946 [Drosophila simulans];Query=GD17946%20[Drosophila%20simulans] 1 63
3L	Scipio	protein_match	11014683	11014728	1.0	+	2	gene_id=kassiopeia_gene_id399054 GD17946 [Drosophila simulans];Query=GD17946%20[Drosophila%20simulans] 64 79
3L	Scipio	protein_match	11015699	11015738	1.0	+	2	gene_id=kassiopeia_gene_id399054 GD17946 [Drosophila simulans];Query=GD17946%20[Drosophila%20simulans] 64 77
3L	Scipio	protein_match	11015789	11016329	1.0	+	1	gene_id=kassiopeia_gene_id399054 GD17946 [Drosophila simulans];Query=GD17946%20[Drosophila%20simulans] 80 259
# protein sequence = [MQSSLAWISLFTLLLGHQVSAKLLDESCGNSKELSRAGLQAAAWMTAVSNATHFLCGGTLIHKRIVLTAARCIDQQVN
# LRYVLLLETNKTISNRLPVDSIIRHDNFSGYHKHDIALLKLKQPVTLGNYFSEGIKPICMLQMLSHQLEAESSASLTRLVPEISENRLLITEHTVELI
# SHGECVKQINAEIEQNQVCVADSTGKTNPNYLRGEVLGKILMYSAKKWVALFGILSYSTSNVHVYTNVMRYTNWIEQTVKSYS]
#
##gff-version	3
##query	GD14592%20[Drosophila%20simulans] 1 1147
3L	Scipio	protein_match	15385068	15385322	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1 85
3L	Scipio	protein_match	15393750	15393862	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 86 123
3L	Scipio	protein_match	15393927	15394481	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 124 308
3L	Scipio	protein_match	15394719	15394807	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 309 337
3L	Scipio	protein_match	15395512	15395625	1.0	+	2	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 338 375
3L	Scipio	protein_match	15395842	15395932	1.0	+	2	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 376 406
3L	Scipio	protein_match	15399362	15399454	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 407 437
3L	Scipio	protein_match	15399521	15399649	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 438 480
3L	Scipio	protein_match	15399942	15400158	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 481 552
3L	Scipio	protein_match	15401422	15402252	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 553 829
3L	Scipio	protein_match	15403374	15403518	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 830 877
3L	Scipio	protein_match	15403584	15403826	1.0	+	2	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 878 958
3L	Scipio	protein_match	15404090	15404187	1.0	+	2	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 959 991
3L	Scipio	protein_match	15404364	15404426	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 992 1012
3L	Scipio	protein_match	15410075	15410217	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1013 1060
3L	Scipio	protein_match	15410285	15410375	1.0	+	1	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1061 1090
3L	Scipio	protein_match	15410803	15410889	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1091 1119
3L	Scipio	protein_match	15411887	15412000	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1120 1157
3L	Scipio	protein_match	15413852	15413935	1.0	+	0	gene_id=kassiopeia_gene_id395940 GD14592 [Drosophila simulans];Query=GD14592%20[Drosophila%20simulans] 1120 1147
# protein sequence = [MSSLDARNNSAMMKRAEQLKRWEESDTNRAAPTPRHEHGRRIKFSSGCVFLAACLSGDKDEVVQLLDQGADINTANVD
# GLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVSIARYLVENGADVAAVNSDGDLALDLAIDVQHMAMIDFMEKMVQELNINVD
# EARKAEEQAMLNDAKKWLRSDAAEVDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHWGQRETAEMLVESLADMDIRNYA
# GQSCIDVADRKIVKFLEELRANKRNKRRPSSQISRISDAMENHVDKTPTKLVRVEVRTDATKDAENVKPNQQIHAVEHPVEEEAPWRRKLPRTPSDSP
# TNNQVPDRELSSNSSETANDVILRRTQSFENDQKKPTVTIATPTSTAATAINSPSTTVQTPQFRSQVTAKLAEKSNNGSSSTASVSDAESSKPPPKQS
# ASNMIKNFFKSFVPPVRDEESETQRKAHAKRVRETRRSTQGVTLDEIKSAEELVKKKNMGMANNNNNNNISTTTTNTISNSGNETSSASSTSAPTPSI
# LDTNEQQDELQPPPPPTTPPPAIIPTTTTATDETEIEEVVSSPTAGQSQNDTTASFTLSAPVRRSLSTEGEADANSDPEGDQDQTVVSASYTIMPRRD
# RLPESSDNVESIRSPQKTDPVAKSSSEEKAEEPTHVRPTDLPLIPAPAAPSTEAIKSSSAATTPAALESPVRLRDKRGLSGSQESETKSDTASPVSSH
# PDFNARDSLLSLYARRTTDSSAGGGGVGGGAGVGAGGASGAASSSSTSAAERRPSWRLKFDAGSKFKLEDITSGGTYPPNNSTIIPSAPAVMAAANLS
# TTTGVQRRISSGPNALNASNQSLNSVGRPVSAPSEGTNNSAYVTPSVRKFETNATSTGATTAATTTSNSTSNSVSATSANHTAATAPNATSNHDDKDN
# DKENDNRTQTVIQRRRKPKRRSTGVVHIDMDELDPERQNESSNNDNEEKEKESGSERTSRSRLGSTASTATTSESKSSSSNDKTENGDGIDYKALWEA
# EKLENDKLRQMLKQKDDEAVQTRATLERFANATTKNSLSELEKRERRAMERKLSELEEELKQLDAYKSDNHRLKEENAALIRVISKLSK]
#
##gff-version	3
##query	GD14716%2C%20partial%20[Drosophila%20simulans] 1 700
3L	Scipio	protein_match	16867518	16867717	1.0	+	0	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 1 67
3L	Scipio	protein_match	16867885	16868146	1.0	+	1	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 68 154
3L	Scipio	protein_match	16868751	16869012	1.0	+	1	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 68 154
3L	Scipio	protein_match	16869091	16869162	1.0	+	0	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 155 178
3L	Scipio	protein_match	16869636	16869743	1.0	+	0	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 179 214
3L	Scipio	protein_match	16869895	16870135	1.0	+	0	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 215 294
3L	Scipio	protein_match	16870194	16870318	1.0	+	2	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 295 336
3L	Scipio	protein_match	16870385	16870526	1.0	+	0	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 337 383
3L	Scipio	protein_match	16870585	16870741	1.0	+	2	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 384 436
3L	Scipio	protein_match	16870800	16871093	1.0	+	1	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 437 534
3L	Scipio	protein_match	16871159	16871557	1.0	+	1	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 535 667
3L	Scipio	protein_match	16871632	16871731	1.0	+	1	gene_id=kassiopeia_gene_id396060 GD14716, partial [Drosophila simulans];Query=GD14716%2C%20partial%20[Drosophila%20simulans] 668 700
# protein sequence = [DSISHNSIEDNNNAAGLANTPTTAATSSATISPSNTPTNNNGIPAHIAMQNRGEEDQDQDPTVDHTSFVYNSLRHPVA
# HRQPEISATSLQNDLRPVREAPGVPDIAITNLLTRRAAGNMAGGAGWQQQRRRQQMQLHIQQHQQRQQQLQQNRILLDVDHRQQEPQHRGQRHQQQHR
# SSNEDTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQRSTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRVEDDLGP
# LPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQAVPYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTDLLKTK
# LWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPID
# LKDMESVDTEYYNSLMWIKENDPRILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIF
# DEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHT
# CFNRLDLPPYEGYLQLKDKLIKAIEGSQGFAGVD]
#
##gff-version	3
##query	GD14730%20[Drosophila%20simulans] 1 664
3L	Scipio	protein_match	17182249	17182467	1.0	+	0	gene_id=kassiopeia_gene_id396073 GD14730 [Drosophila simulans];Query=GD14730%20[Drosophila%20simulans] 1 73
3L	Scipio	protein_match	17182530	17182957	1.0	+	0	gene_id=kassiopeia_gene_id396073 GD14730 [Drosophila simulans];Query=GD14730%20[Drosophila%20simulans] 74 216
3L	Scipio	protein_match	17183125	17183458	1.0	+	1	gene_id=kassiopeia_gene_id396073 GD14730 [Drosophila simulans];Query=GD14730%20[Drosophila%20simulans] 217 327
3L	Scipio	protein_match	17183473	17183800	1.0	+	1	gene_id=kassiopeia_gene_id396073 GD14730 [Drosophila simulans];Query=GD14730%20[Drosophila%20simulans] 217 325
3L	Scipio	protein_match	17183807	17184817	1.0	+	0	gene_id=kassiopeia_gene_id396073 GD14730 [Drosophila simulans];Query=GD14730%20[Drosophila%20simulans] 328 664
# protein sequence = [MFRFGKLHRSLSKVAKKGRTAVYFQSRCVQSRSFLPGLASRTAGTPSATAQVTGGNKHQVQTHGNSVNSGHEEHNSRW
# PRKIFSGIQPTGSLHLGNYLGAVRKWVELQNARDDVTVCIVDLHSITMPHNPPLLRENIFTMAATLLACGIDPTKSTLFVQSAVAEHAEFNWILSSLT
# TMPRLAQLPQFREKSRLLKDVPLGLYVYPVLQAADIMLYKSTHVPVGADQIQHIQLAQHLSRIYNGRYGETFPVCTAIIEDGDASRVLSLRDPSKKMS
# KSEANPKATINLCDSPDLITQKIKKAVTDFTSDITYNPGKRAGVSNLVNIHAQVTGQSIKTVVNEAATLDTAKYKDRVAEAVVEHLRPIREQIHHHMT
# KRNEMIYLLEVGAEKARQQARQTLNDVKQRLGLGTSANIPAAVHVAPLLPAPDISKTSASRRMSKDFDGNVHERHERMYGFGDQPSGGAGQSTTGEMA
# DMPQAVPPRVIRRAPIVPTQSMRVEKQLGTTRTRHVFQMDTCNAPHIGFKPPPGFSSSMVTGGIAKNKRATVKPVTGNLGFGQQSQGGSYKHSQNVNP
# SAVSTIAREVNAAKKQEFTCNPALYGSALESLSNSSRSSEKTNSTPGDSEFIIVPNEEEEQASSEEQREEAEEEESAEREREKGERNATEATKVEI]
#
##gff-version	3
##query	GD14738%20[Drosophila%20simulans] 1 141
3L	Scipio	protein_match	17366634	17366918	1.0	+	0	gene_id=kassiopeia_gene_id396080 GD14738 [Drosophila simulans];Query=GD14738%20[Drosophila%20simulans] 1 95
3L	Scipio	protein_match	17366971	17367052	1.0	+	0	gene_id=kassiopeia_gene_id396080 GD14738 [Drosophila simulans];Query=GD14738%20[Drosophila%20simulans] 96 122
3L	Scipio	protein_match	17368017	17368098	1.0	+	0	gene_id=kassiopeia_gene_id396080 GD14738 [Drosophila simulans];Query=GD14738%20[Drosophila%20simulans] 96 122
3L	Scipio	protein_match	17368212	17368267	1.0	+	2	gene_id=kassiopeia_gene_id396080 GD14738 [Drosophila simulans];Query=GD14738%20[Drosophila%20simulans] 123 141
# protein sequence = [MCLFGAKIQTSSWAKFYSIWCILIGTLGIGYSMYFIIDIDKYIKIVLHLATYIYSSNSLKYERVLVYAWVHNSFIMLF
# SIMYILAGIFMLLGIRTKTKACIKAGKILSYFFPIYNIVYVFPLVIHIGCALKLCRYLKENFD]
#
##gff-version	3
##query	GD14876%20[Drosophila%20simulans] 1 438
3L	Scipio	protein_match	19698610	19698695	1.0	+	0	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 1 29
3L	Scipio	protein_match	19699760	19699935	1.0	+	1	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 30 87
3L	Scipio	protein_match	19700011	19700480	1.0	+	2	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 88 244
3L	Scipio	protein_match	19700544	19700699	1.0	+	0	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 245 296
3L	Scipio	protein_match	19700774	19700971	1.0	+	0	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 297 362
3L	Scipio	protein_match	19701033	19701180	1.0	+	0	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 363 411
3L	Scipio	protein_match	19701350	19701426	1.0	+	2	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 412 437
3L	Scipio	protein_match	19702261	19702340	1.0	+	2	gene_id=kassiopeia_gene_id396215 GD14876 [Drosophila simulans];Query=GD14876%20[Drosophila%20simulans] 412 438
# protein sequence = [MSGEETSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITWV
# QHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLQGNTREVLHKFTVDL
# PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLFITNDKPNIAGLILAGSADFKTELSQSDMFDPRLQSKVIKLVDVSYGGENGFNQAIELAAES
# LQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHANSTSTTVLHLTPEQEKDKSHFTDKESGVEMELIES
# QPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDDLDNDGFDLDDY]
#
##gff-version	3
##query	GD14963%20[Drosophila%20simulans] 1 70
3L	Scipio	protein_match	20788260	20788307	1.0	+	0	gene_id=kassiopeia_gene_id396301 GD14963 [Drosophila simulans];Query=GD14963%20[Drosophila%20simulans] 1 16
3L	Scipio	protein_match	20790212	20790256	1.0	+	0	gene_id=kassiopeia_gene_id396301 GD14963 [Drosophila simulans];Query=GD14963%20[Drosophila%20simulans] 1 15
3L	Scipio	protein_match	20792286	20792339	1.0	+	0	gene_id=kassiopeia_gene_id396301 GD14963 [Drosophila simulans];Query=GD14963%20[Drosophila%20simulans] 1 18
3L	Scipio	protein_match	20794599	20794652	1.0	+	0	gene_id=kassiopeia_gene_id396301 GD14963 [Drosophila simulans];Query=GD14963%20[Drosophila%20simulans] 1 18
3L	Scipio	protein_match	20797335	20797496	1.0	+	0	gene_id=kassiopeia_gene_id396301 GD14963 [Drosophila simulans];Query=GD14963%20[Drosophila%20simulans] 17 70
# protein sequence = [MAAATVVTGMECMAGRWHPYIIVVFLECDLQLVVGAVIWSVPGGTPLPPENEDPGLPCVRDYGLYVRVDR]
#
##gff-version	3
##query	GD15000%20[Drosophila%20simulans] 1 102
3L	Scipio	protein_match	21120903	21120956	1.0	+	0	gene_id=kassiopeia_gene_id396337 GD15000 [Drosophila simulans];Query=GD15000%20[Drosophila%20simulans] 1 18
3L	Scipio	protein_match	21123509	21123553	1.0	+	0	gene_id=kassiopeia_gene_id396337 GD15000 [Drosophila simulans];Query=GD15000%20[Drosophila%20simulans] 19 33
3L	Scipio	protein_match	21123629	21123685	1.0	+	0	gene_id=kassiopeia_gene_id396337 GD15000 [Drosophila simulans];Query=GD15000%20[Drosophila%20simulans] 19 37
3L	Scipio	protein_match	21126180	21126374	1.0	+	0	gene_id=kassiopeia_gene_id396337 GD15000 [Drosophila simulans];Query=GD15000%20[Drosophila%20simulans] 38 102
# protein sequence = [MQIPAAYGHMKSGCSQIASGYYFPDLLASKLSLACACISWTRADGPPQSLDIWRFMCTMNGQSGNRNRRLRLQLKLKY
# QPTADQIDAVYRVPLHPETALPSI]
#
##gff-version	3
##query	GD15037%20[Drosophila%20simulans] 1 195
3L	Scipio	protein_match	21923112	21923222	1.0	+	0	gene_id=kassiopeia_gene_id396374 GD15037 [Drosophila simulans];Query=GD15037%20[Drosophila%20simulans] 1 37
3L	Scipio	protein_match	21923291	21923761	1.0	+	0	gene_id=kassiopeia_gene_id396374 GD15037 [Drosophila simulans];Query=GD15037%20[Drosophila%20simulans] 38 194
3L	Scipio	protein_match	21924072	21924545	1.0	+	0	gene_id=kassiopeia_gene_id396374 GD15037 [Drosophila simulans];Query=GD15037%20[Drosophila%20simulans] 38 195
# protein sequence = [MKMYFRHHYSFDISMEMLKVFTIVSLIFVHKLAITGASSSVTLTRVQCEKNAKFFATLNVTSVNSTIYADIELLQALK
# AGFRGHVDVQLRLSNAKRFQSLVQTDTDYCELLSTLKDSLFRRWIKSVSKNSNFMENCPVPAGHYYLKGWHVDMGLVPSYLLSGDYLLSALVYYGKYR
# TKKQMFLVRCILEATMHNK]
#
##gff-version	3
##query	GD17024%20[Drosophila%20simulans] 1 537
3R	Scipio	protein_match	25971658	25971836	1.0	-	0	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 1 60
3R	Scipio	protein_match	25970632	25970786	1.0	-	1	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 61 111
3R	Scipio	protein_match	25970426	25970573	1.0	-	2	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 112 161
3R	Scipio	protein_match	25969688	25969899	1.0	-	1	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 162 231
3R	Scipio	protein_match	25969466	25969614	1.0	-	2	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 232 281
3R	Scipio	protein_match	25968860	25969008	1.0	-	2	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 232 281
3R	Scipio	protein_match	25968297	25968800	1.0	-	0	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 282 449
3R	Scipio	protein_match	25968066	25968231	1.0	-	0	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 450 504
3R	Scipio	protein_match	25967759	25967856	1.0	-	2	gene_id=kassiopeia_gene_id398230 GD17024 [Drosophila simulans];Query=GD17024%20[Drosophila%20simulans] 505 537
# protein sequence = [MRGLTLLVGLFSLLAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNTIKTALQHLESELSSIEKEHTMAASDTEN
# YLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNATREYGLSYPSQEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQL
# FEMEDYNNTKVWLRESMERLRRQTSHASSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIRNWHLGDKGTAPPEDIEDVYLP
# KHSDSYSLSQEFAKYEKVCRGEVHPIARQELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDMLSPRKISQLREMAVPRMHRSTVNPLPGGQLKKS
# AFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRDPNHYPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKP
# QLGNVLFWYNLHRSLDKDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPCDVFRDHEVSLEYEIIK]
#
##gff-version	3
##query	GD18085%20[Drosophila%20simulans] 1 493
3R	Scipio	protein_match	22872567	22872668	1.0	-	0	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 1 34
3R	Scipio	protein_match	22872258	22872508	1.0	-	0	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 35 118
3R	Scipio	protein_match	22871797	22872199	1.0	-	1	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 119 252
3R	Scipio	protein_match	22871417	22871526	1.0	-	0	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 253 289
3R	Scipio	protein_match	22869899	22869996	1.0	-	0	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 253 285
3R	Scipio	protein_match	22869160	22869784	1.0	-	1	gene_id=kassiopeia_gene_id399171 GD18085 [Drosophila simulans];Query=GD18085%20[Drosophila%20simulans] 286 493
# protein sequence = [MQKKLSDYLQALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKEEDLDSQQGVIDFSLYLRSSSRN
# ADAAPEDSAPPALLDATGQGNMIAVLDQKNYIEELNRHLNATVGNLQTKVESLTTTNALMKEDLAIARNSLLALQAENQAMRQSTPAADNHSTVSGGS
# SDKDKEKASEELAEERRKNSELEKELKLQVSLKAESDMAMKLLEKDIHEKQDTIVSLRRQLDDIKQINLEMYRKLQDCKASLTHKTELMTKLEVQKED
# MASTIDQLEKKWSHDKSNLGEILKTTSQTLTTQVTASEERAARAEAESRIEREWRISLQEKELKLKEKIANLQGCLKELSEEKERNGKLKADLDKVRT
# QWSEAQTTLEELGIQLSVSKLKVSEMQDQERRQRQLLSGSAQSLQAMPEAVGSPGIWAPDSIATHCTACEREFNLTRRKHHCRSCGEIFCKACSEHTL
# PLLNAQGQPGKPVRVCDNCYAAK]
#
##gff-version	3
##query	GD18141%20[Drosophila%20simulans] 1 363
3R	Scipio	protein_match	21927086	21927881	1.0	-	0	gene_id=kassiopeia_gene_id399221 GD18141 [Drosophila simulans];Query=GD18141%20[Drosophila%20simulans] 1 265
3R	Scipio	protein_match	21926794	21926993	1.0	-	2	gene_id=kassiopeia_gene_id399221 GD18141 [Drosophila simulans];Query=GD18141%20[Drosophila%20simulans] 266 332
3R	Scipio	protein_match	21926421	21926513	1.0	-	0	gene_id=kassiopeia_gene_id399221 GD18141 [Drosophila simulans];Query=GD18141%20[Drosophila%20simulans] 333 363
3R	Scipio	protein_match	21926103	21926195	1.0	-	0	gene_id=kassiopeia_gene_id399221 GD18141 [Drosophila simulans];Query=GD18141%20[Drosophila%20simulans] 333 363
# protein sequence = [MTTYFNYPSKELQDELRDIAQRIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVI
# LFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYAS
# ICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQ
# SEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANSQACQGIYVPGSIPSFAGNANLFVAQHKY]
#
##gff-version	3
##query	GD18145%20[Drosophila%20simulans] 1 644
3R	Scipio	protein_match	21794061	21794113	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 1 18
3R	Scipio	protein_match	21778671	21778726	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 1 19
3R	Scipio	protein_match	21765392	21765573	1.0	-	1	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 19 78
3R	Scipio	protein_match	21762378	21762448	1.0	-	2	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 79 102
3R	Scipio	protein_match	21761365	21761454	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 103 132
3R	Scipio	protein_match	21759145	21759444	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 133 232
3R	Scipio	protein_match	21756851	21757035	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 233 294
3R	Scipio	protein_match	21756666	21756772	1.0	-	1	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 295 329
3R	Scipio	protein_match	21756114	21756267	1.0	-	2	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 330 381
3R	Scipio	protein_match	21755378	21755987	1.0	-	1	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 382 584
3R	Scipio	protein_match	21742241	21742420	1.0	-	0	gene_id=kassiopeia_gene_id399224 GD18145 [Drosophila simulans];Query=GD18145%20[Drosophila%20simulans] 585 644
# protein sequence = [MSHVIRPTDPDLNSSFRRFDANKSTKGASKMRRDLINAEIANLRDLLPLPQSTRQRLSQLQLMALVCVYVRKANYFQQ
# VFKRHNAMHHLHHQTATPNIGFSKALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRNVPPQPGGSSQASSGG
# AGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRNARRQMRFGDQKVVLVQGHYLSFLPLCSRNEPVFLATCTPIAMPETRECVVQGA
# TNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKHSLIIQSEQDRSCILLVRMQRSSGEYTWVHVVLQVRDSPDSTQQPV
# IVCTNQVLNDREASIMLANSWLYQYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPHSSHPPATPGGATPNLGIASSFGPHHHPHHSHHPHHHHHHHH
# PATAYHHHPHMGTYGGVYHAKAAIELKEDQPLFCFQEPVDYSQVNSHVNPPNATSTPNPPASKPSTPPPPKKRARKLEPLYLHAERSPAAAITPEPDC
# YAIHTHPAAAYATSSVTPDTDASLSGWPTLDGRPARYICWQHHQRKDTDTEAEDDAAGGTRMVLPGPIISQHSKAC]
#
##gff-version	3
##query	GD18174%20[Drosophila%20simulans] 1 883
3R	Scipio	protein_match	21404971	21405052	1.0	-	0	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 1 27
3R	Scipio	protein_match	21402248	21402367	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 28 67
3R	Scipio	protein_match	21402006	21402122	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 68 106
3R	Scipio	protein_match	21401109	21401231	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 68 108
3R	Scipio	protein_match	21399997	21400223	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 109 184
3R	Scipio	protein_match	21398004	21399416	1.0	-	0	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 185 655
3R	Scipio	protein_match	21397707	21397905	1.0	-	0	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 656 721
3R	Scipio	protein_match	21397388	21397546	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 722 774
3R	Scipio	protein_match	21394907	21395040	1.0	-	2	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 775 819
3R	Scipio	protein_match	21394668	21394829	1.0	-	0	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 820 873
3R	Scipio	protein_match	21394462	21394491	1.0	-	0	gene_id=kassiopeia_gene_id399252 GD18174 [Drosophila simulans];Query=GD18174%20[Drosophila%20simulans] 874 883
# protein sequence = [MGRIWCLLFVSSLLHTQSQSFRVLAINEATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCRARTCSPDEYA
# CKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPD
# CSDGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDERDCGL
# SLSLGVNQGGCNSTSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPG
# KCSQICVNEMGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEG
# NEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDV
# KWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYH
# PYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDLTRPPRARKTKPRTKSPRRRLPTGVQVGHADIRIEINDDLQLS
# TRLPLLPTTFVADQRPVKNHTQIEKTTTPSEQPDSGFIALVVIASLSGFAVLLSVLLLIGYRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKNLPAR
# IYDHTSVMDEEYSPVIGISSY]
#
##gff-version	3
##query	GD18407%20[Drosophila%20simulans] 1 502
3R	Scipio	protein_match	18747577	18747714	1.0	-	0	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 1 46
3R	Scipio	protein_match	18716906	18716972	1.0	-	0	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 47 68
3R	Scipio	protein_match	18716639	18716741	1.0	-	2	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 69 103
3R	Scipio	protein_match	18711959	18712107	1.0	-	1	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 104 152
3R	Scipio	protein_match	18711134	18711336	1.0	-	2	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 153 220
3R	Scipio	protein_match	18710944	18711063	1.0	-	0	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 221 260
3R	Scipio	protein_match	18710781	18710877	1.0	-	0	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 261 292
3R	Scipio	protein_match	18710133	18710223	1.0	-	0	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 261 290
3R	Scipio	protein_match	18709536	18709922	1.0	-	2	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 293 421
3R	Scipio	protein_match	18708378	18708515	1.0	-	2	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 422 467
3R	Scipio	protein_match	18707112	18707215	1.0	-	2	gene_id=kassiopeia_gene_id399479 GD18407 [Drosophila simulans];Query=GD18407%20[Drosophila%20simulans] 468 502
# protein sequence = [MKHSPLIASACLALVLMSSSLIGSTEARNKKKYVGETGGDFEFIDEINKNTQSNKNLGEHKRWIHDPSSDLCRPLNCK
# KREICLLEDEFSAVCVSKKELHKNRNCKPCPVAKPTFLCGADNRTYSSLCRLDYHNCIHSTSIRIACKGFCPCKEIVDGKRLQRISGYNNKYNKKISL
# DQQQQQQQQQQQQQAYKDSNNNNIMMNSGNIMGGNNNDFNTIMNDKEDNNRHNNHINAQYTFTPEEIKYDNKHYKYLKYTAYKKDSKYQEDKHKMRNY
# NEVVEKQQQKFNKNSNLNAYPSKSAECKPQQLTAIGNRLLDWFSVIMADSKKRRQHSQKSKAHFPPACKTEAKWMFGHLDLNNDGQLSLQEMYDLEHD
# QNERCIKPFIDTCDLDTDSSINTREWCRCFEKTDRPCAAVRRRIAGDFAGAYAPDCDIQGFYKPTQCHNSVGVCWCVDKHGVEFANTRTRGKPNCESV
# VNNAASLTSDDEDEGADDEDSAEGSADQMLVF]
#
##gff-version	3
##query	GD18766%20[Drosophila%20simulans] 1 85
3R	Scipio	protein_match	13965043	13965094	1.0	-	0	gene_id=kassiopeia_gene_id399821 GD18766 [Drosophila simulans];Query=GD18766%20[Drosophila%20simulans] 1 17
3R	Scipio	protein_match	13964783	13964834	1.0	-	0	gene_id=kassiopeia_gene_id399821 GD18766 [Drosophila simulans];Query=GD18766%20[Drosophila%20simulans] 1 17
3R	Scipio	protein_match	13961661	13961863	1.0	-	2	gene_id=kassiopeia_gene_id399821 GD18766 [Drosophila simulans];Query=GD18766%20[Drosophila%20simulans] 18 85
# protein sequence = [MDCKYKYEYLNVGSGSSGAFKVLFPTVTRRWETDNGQVQCVIRRTPNFSSERNVLLWDWMRCDVMGDQLNGLGGVCLA
# ISPKSSG]
#
##gff-version	3
##query	GD19006%20[Drosophila%20simulans] 1 732
3R	Scipio	protein_match	10356316	10356429	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 1 38
3R	Scipio	protein_match	10355749	10355874	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 39 80
3R	Scipio	protein_match	10354546	10354636	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 81 110
3R	Scipio	protein_match	10351666	10352852	1.0	-	2	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 111 506
3R	Scipio	protein_match	10345294	10345427	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 507 551
3R	Scipio	protein_match	10344997	10345114	1.0	-	1	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 552 590
3R	Scipio	protein_match	10343820	10343937	1.0	-	1	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 552 590
3R	Scipio	protein_match	10341169	10341239	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 591 614
3R	Scipio	protein_match	10340346	10340416	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 591 614
3R	Scipio	protein_match	10339673	10339751	1.0	-	1	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 615 640
3R	Scipio	protein_match	10339422	10339484	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 641 661
3R	Scipio	protein_match	10338812	10338874	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 662 682
3R	Scipio	protein_match	10337337	10337406	1.0	-	0	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 683 705
3R	Scipio	protein_match	10333145	10333224	1.0	-	2	gene_id=kassiopeia_gene_id400052 GD19006 [Drosophila simulans];Query=GD19006%20[Drosophila%20simulans] 706 732
# protein sequence = [MDAIKKKMQAMKVDKDGALERALVCEQEARDANTRAEKAEEEARQLQKKIQTVENELDQTQEALTLVTGKLEEKNKAL
# QNESISRTFGIVSKRSQQVKRLENLSLGVDPQEKTQVQPQSGKTVAKPKQRQQKQLFKSDKAKEKFSRQQRKRGGTRSTRNPRTQSESSGLSSRWISI
# EEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFWSDSDMEHDDSSTSGTGRHTASNTSLVPASLKRRGHQHHPRLSGTRRPNVPNVQ
# EILAALYRGDSKSALSNLRGETQPEEEQPQQQPEEMLPPSRSTLSLPLSESVTNSLGSNSPTPTDESSVQDEGASNPAAASIAEDAAPPAATTTSKSK
# KKKREKGERSEKSEKSEKSDRKKKSSSKKERSKRSNPMELSSDSLATDLSAGTIDEGIALADDDDNQAAEWSKLRCTSEAAEIVAEREARRNKGRCAD
# YPGLAFGRSIFSSDTMMKFNIIRNELHNIMNTQLKRAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADESERARKILENRALADEERMD
# ALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVELEEELRVVGNNLKSLEVSERRSANQREEEYKNQIKTLNTRLKEATQKE
# ETFETQIKVLDHSLKEAEARAEFAERSVQKLQKEVDRLEDELGINKDRYKSLADEMDSTFAELAGY]
#
##gff-version	3
##query	GD19086%20[Drosophila%20simulans] 1 476
3R	Scipio	protein_match	9350499	9350548	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 1 17
3R	Scipio	protein_match	9350010	9350218	1.0	-	1	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 18 86
3R	Scipio	protein_match	9347126	9347236	1.0	-	2	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 87 123
3R	Scipio	protein_match	9345798	9345964	1.0	-	2	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 124 179
3R	Scipio	protein_match	9344091	9344242	1.0	-	2	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 124 174
3R	Scipio	protein_match	9343136	9343250	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 180 217
3R	Scipio	protein_match	9342806	9343074	1.0	-	2	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 218 307
3R	Scipio	protein_match	9342565	9342735	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 308 364
3R	Scipio	protein_match	9341337	9341417	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 365 391
3R	Scipio	protein_match	9340196	9340294	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 392 424
3R	Scipio	protein_match	9338527	9338633	1.0	-	0	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 425 460
3R	Scipio	protein_match	9337947	9337995	1.0	-	1	gene_id=kassiopeia_gene_id400127 GD19086 [Drosophila simulans];Query=GD19086%20[Drosophila%20simulans] 461 476
# protein sequence = [MLRKYIYIQKTNIKAENGGGPQTTTAGPSAGNVANATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGC
# GNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIA
# KQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMY
# FLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQ
# TGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKK
# KSTRQK]
#
##gff-version	3
##query	GD19156%20[Drosophila%20simulans] 1 206
3R	Scipio	protein_match	8233667	8233841	1.0	-	0	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 1 58
3R	Scipio	protein_match	8233456	8233608	1.0	-	2	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 59 109
3R	Scipio	protein_match	8232799	8232973	1.0	-	0	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 1 58
3R	Scipio	protein_match	8232588	8232740	1.0	-	2	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 59 109
3R	Scipio	protein_match	8231949	8232053	1.0	-	2	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 110 144
3R	Scipio	protein_match	8231706	8231890	1.0	-	2	gene_id=kassiopeia_gene_id400195 GD19156 [Drosophila simulans];Query=GD19156%20[Drosophila%20simulans] 145 206
# protein sequence = [MKSLFSLCLLLGLALSQVSASCPESCPDTEDVVWALSGGCNVFRNKCYFDKANCNPDYELTITTKEECQKYCADVCPA
# VYQPTGGIYKGQLRKFGNECEKIIHTCRTGESECPDTEEVVWALGGGCNVFRNKCYFDKENCHRKPPLTITTKMECQKECSDVCTAIYQPTTGIYKGK
# VLHFGNECEKRSHTCRSGHSKLNIMFKYYS]
#
##gff-version	3
##query	GD19310%20[Drosophila%20simulans] 1 448
3R	Scipio	protein_match	5906294	5906355	1.0	-	0	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 1 21
3R	Scipio	protein_match	5905121	5905233	1.0	-	1	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 22 58
3R	Scipio	protein_match	5904660	5904727	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 59 81
3R	Scipio	protein_match	5902852	5902919	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 59 81
3R	Scipio	protein_match	5901092	5901162	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 59 82
3R	Scipio	protein_match	5898663	5898732	1.0	-	0	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 82 104
3R	Scipio	protein_match	5898362	5898602	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 105 185
3R	Scipio	protein_match	5898170	5898223	1.0	-	1	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 186 203
3R	Scipio	protein_match	5897343	5897401	1.0	-	1	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 204 222
3R	Scipio	protein_match	5895220	5895372	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 223 273
3R	Scipio	protein_match	5894530	5894709	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 274 333
3R	Scipio	protein_match	5893214	5893320	1.0	-	2	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 334 369
3R	Scipio	protein_match	5892319	5892443	1.0	-	0	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 370 411
3R	Scipio	protein_match	5891346	5891450	1.0	-	1	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 412 446
3R	Scipio	protein_match	5891126	5891132	1.0	-	1	gene_id=kassiopeia_gene_id400340 GD19310 [Drosophila simulans];Query=GD19310%20[Drosophila%20simulans] 447 448
# protein sequence = [MGSGHYFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVRVNIFVRSISKIDD
# VTMEYSVQLTFREQWTDERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQI
# CSLRMASCKWLDTNDLVSCGRGDPVQVSFTLLFFMSTLKSARALSKCEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLG
# VTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENMKKKRRDLEQASLDAASDLLDTDSNATFAMKPL
# VRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRSKRIDVISRITFPLVFALFNLVYWSTYLFREEEDETF]
#
##gff-version	3
##query	GD19388%20[Drosophila%20simulans] 1 1092
3R	Scipio	protein_match	4680436	4680459	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 1 8
3R	Scipio	protein_match	4669166	4669246	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 9 35
3R	Scipio	protein_match	4667632	4667763	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 36 79
3R	Scipio	protein_match	4666911	4667177	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 80 168
3R	Scipio	protein_match	4665065	4666846	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 169 762
3R	Scipio	protein_match	4664493	4664708	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 763 834
3R	Scipio	protein_match	4664211	4664305	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 835 866
3R	Scipio	protein_match	4654884	4654978	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 835 866
3R	Scipio	protein_match	4652505	4652679	0.996	-	1	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 867 924
3R	Scipio	protein_match	4652148	4652380	0.996	-	0	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 925 1002
3R	Scipio	protein_match	4651805	4652075	0.996	-	1	gene_id=kassiopeia_gene_id400416 GD19388 [Drosophila simulans];Query=GD19388%20[Drosophila%20simulans] 1003 1092;Mismatches=1037 1038 1039 1040
# protein sequence = [MALRSDYEHGRADSYRVATVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQRFQTHPE
# NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIM
# ESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKG
# VVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASK
# NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVSGDAS
# EAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGE
# RVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRL
# NIPISEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA
# DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMIPAISLAYEGPEADIMKRRPRNPEIDNL
# VNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRN
# SIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLExxxxEAGWSRRPTIKHPHFPLV
# APHTATCPHTNTFNRNKSNQEHPQKHLQSMESNK]
#
##gff-version	3
##query	GD19795%20[Drosophila%20simulans] 1 589
3R	Scipio	protein_match	1435394	1435472	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 1 26
3R	Scipio	protein_match	1435535	1435598	1.0	+	2	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 27 48
3R	Scipio	protein_match	1435837	1436027	1.0	+	1	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 49 111
3R	Scipio	protein_match	1436087	1436163	1.0	+	2	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 112 137
3R	Scipio	protein_match	1436425	1436559	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 138 182
3R	Scipio	protein_match	1436619	1436681	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 183 203
3R	Scipio	protein_match	1436930	1437076	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 204 252
3R	Scipio	protein_match	1437338	1437576	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 253 332
3R	Scipio	protein_match	1438155	1438378	1.0	+	0	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 253 327
3R	Scipio	protein_match	1438761	1438996	1.0	+	1	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 328 405
3R	Scipio	protein_match	1439065	1439538	1.0	+	2	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 406 563
3R	Scipio	protein_match	1439608	1439684	1.0	+	2	gene_id=kassiopeia_gene_id400812 GD19795 [Drosophila simulans];Query=GD19795%20[Drosophila%20simulans] 564 589
# protein sequence = [MSTSPKPVKKVPIHLQSAQNRVYIKNGEIVNHDKSFKADVYIEDGIIKFVGPSSEITIPGGVRTIDASGLMIIPGGID
# PHTHMQLPFGGAVAVDDFYHGTKAAVAGGTTMIIDFVLPNKHESMIEAYDKWRSWADPKVCCDYGLHVGITWWSKSVSEEIGILCKELGVNSFKTFMA
# YKGLYQLNDSDLLDVFERIRHLNGVAMVHAENGDIIAKNTQRLLAEGINGPEGHELSRPEEVEAEAVHRACVLAHQMKTPLFVSGLTSKSSAELVGRA
# RRSGYCVFGETLASSLGRSMSAVPKGDRIYAITSPPIRESAETPRQLMKSLAYDDLQLTGSDNCTFNKEHKALGKGDFTKIPNGVNGVEDRMSLVWEK
# GVHAGLLDPCRFVAVTSTNAAKIFNIYPQKGRIAVGSDADIVIWNPNATRTISKDTHHHACDFNIFEGMTVHGVCEFVLVRGRICAERGNVRVAEGFG
# RFIPTPVRPPFVYDIIEGKVQSQPEEQHEEKQNGSVAKRFAELDIQIPVQEPISAMLAGNLAMPAEGSLCSTPSVRGRVDGKRDLQESSFSISEELDR
# SGVRACIKVKNPPGGKSSGFW]
#
##gff-version	3
##query	GD20019%20[Drosophila%20simulans] 1 3194
3R	Scipio	protein_match	4590716	4591439	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 1 241
3R	Scipio	protein_match	4591998	4592150	1.0	+	2	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 242 292
3R	Scipio	protein_match	4592206	4592417	1.0	+	2	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 293 363
3R	Scipio	protein_match	4592482	4592723	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 364 444
3R	Scipio	protein_match	4593236	4593459	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 364 438
3R	Scipio	protein_match	4593524	4593806	1.0	+	1	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 445 538
3R	Scipio	protein_match	4593873	4594138	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 539 627
3R	Scipio	protein_match	4594196	4594647	1.0	+	1	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 628 777
3R	Scipio	protein_match	4594748	4596324	1.0	+	2	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 778 1303
3R	Scipio	protein_match	4596553	4596825	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 1304 1394
3R	Scipio	protein_match	4597084	4597113	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 1395 1404
3R	Scipio	protein_match	4597246	4598187	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 1405 1718
3R	Scipio	protein_match	4598273	4599319	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 1719 2067
3R	Scipio	protein_match	4599515	4600227	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2068 2305
3R	Scipio	protein_match	4600457	4600775	1.0	+	1	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2306 2411
3R	Scipio	protein_match	4604116	4604286	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2412 2468
3R	Scipio	protein_match	4604353	4604669	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2469 2574
3R	Scipio	protein_match	4604732	4605146	1.0	+	1	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2575 2712
3R	Scipio	protein_match	4605303	4606304	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 2713 3046
3R	Scipio	protein_match	4606363	4606511	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 3047 3096
3R	Scipio	protein_match	4607302	4607434	1.0	+	1	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 3097 3140
3R	Scipio	protein_match	4607615	4607776	1.0	+	0	gene_id=kassiopeia_gene_id401026 GD20019 [Drosophila simulans];Query=GD20019%20[Drosophila%20simulans] 3141 3194
# protein sequence = [MEPSTSAEAAAAAAAGGPDPRLELMGSFVIKSLKLKPEKWTRVVTVEEHKGIIKEFLDRNTPVVLIIILTPAAQLVPS
# TTFPLSQLKSKGVYFIKRYALPIPREDCGNFIIYGDLATRTIDQLSALVEEVLVPLLSNEDNYRSWPIMVAQDVQKHVHSLKSTVHQVKGQVSGETIL
# AMPVGVEKIVKAAKELVETEQCQFDLYLKSAIEGVVIKWATQIHEVIKESPSNAFSNGQNPTPHTEFTFWNNRLKNLSFIYDQLRNERIRAMALILEY
# SMSAYHPCFQTLFKNVVTALAEAKDITLYLNPLKRPLQHLEEIDFAECKPLLIPFMNTVGILWGNSRYYCQSAKITVLLQEICNLIIHQAKRYLDPSS
# IFHSDIDEAMQRLTLSIQILKFFRELFDYYKERLATFFTEPEERPPILWTFHPNSVFKRFNAFLERLTTIQWFFFTVIEFLKLEKVEIGGLRGRQLST
# RITDVYVEFNQYFTAFASKSYDVLDPDDHEFDEDFKGFQTRILELDMKLAAILCQAFDDCHNLESIFKLISIVGSVLDRPKIKEEFTQRYAEIVRMLD
# DEMTVCESIYDKQMELKKVGDNLYPNYNCPPVAAFIRWCHQLETRITAPVKNFKALQHEITKTEKSQEIVERYEILMVKLGSCKTQFFDDWAGQLDGQ
# IEENLKKSLIARDRRHNSLILNFSAALFSILREVHYMQQMKIEGIPQIAIDFAEKSDVFRSYTLNLEKTIDWYNSIQEGSSPVELRLIEPEIKMIDDL
# VEIGVNQLVWNSSDILSYLDKLRKPVAALQNRMDHTQGNLRQIRKIMGVWAKQPLFERRDCKKDTVLSIDERPDRTSKRYAEIQAASIEIHKLLQDNM
# LQFDMESKQDDAVWLSYVDFVDNIVYENILKTVGVSVGYLAENMDPENNYAPLFESRLELVEPNLVFVPSLDPEDPMGFNNMLIELMRDIMKMGSLIK
# RLKPNEKRNYVEMIKENQDIIDMRREILNGVDLVMEEASRFCRQFERYSYLWLDDREECMEYFLEYGRMLDPDEIELILINDPNQPPPQPCQPTIEAF
# REQIDNYESLFNEIEDIGPFQVFSSWFQVDVRPFRQALLNTVCKWGNMFKEHLVTTVTSSLMNLSHFIRKADEGLLQTVKEKDYEGLVSIMAYLMQVK
# ERAAKTDEMFEPMQETIQLLKYYDMDIPEEVNVLLQELPEQWANTKKIATTVKQQVSPLQATEVVSIRNKIALFESHIQLFREVFKTYDFFRFDCYKP
# YLLMDRINDDMFLCESEMRDIQESGSLFEVNIPEFKVLKQCRKELRMLKQLWDYVNIVATSIDDWKTTPWRKVDVENMDIECKKFAKDIRLLDKEMRP
# WDTFINLESTVKNMLTSLRAVGELQNPAIRERHWNQLMNSTKSLAALPKEVTVKFIMDHETTLAELLGLNLHECEEEVKNIVDKAVKEMSMEKILRDL
# NTTWTVMEFDHELHPRTGCNLLKASEELIETLEDNQVCLQNLITSKYIAHFLEEVSTWQNKLMIADQVITVWFEVQRTWTHLESIFMSSEDIRKQLPV
# DSDRFDNIDAEFRVLMDEMSVSSNVVASTNRSGLIERLEHLQKELTLCEKALAEYLETKRLAFPRFYFVSSADLLDVLSNGIQPEMVTKHLTKLFDSI
# ARLKFNRDESNEINTASGMYAKDGEYVEFNELASIRGPVEVWLNRIQAAMRASLRHYVMEAVIAYEEKQREQWLFDYPAQVSLCGSQIWWSTEVNIAF
# SRLEEGYDNAIKDYYKKQISQLSLLITLLLGELSKGDRQKIMTICTIDVHSRDVVAKMIQAKLDSGSAFMWQSQLRHRFDDVEKDCFANICDAEFQYC
# HEYLGNTPRLVITPLTDRCYITLTQSLHLVMGGAPAGPAGTGKTETTKDLGRAIGISVYVFNCSEQMDYQSCGNIYKGLAQTGAWGCFDEFNRITVEV
# LSVVAVQVKSVQDAIRDKKDKFNFMGEMISCVPTVGIFITMNPGYAGRTELPENLKALFRPCAMVVPDFELICEIMLVAEGFQDARVLARKFITLYTL
# CKELLSKQDHYDWGLRAIKSVLVVAGSLKRGDPGRPEEEVLMRALRDFNIPKIITDDMPVFMGLISDLFPALDVPRKRDQDFERTVKQAASDLLLQPE
# DNFILKVVQLEELLEVRHSVFIVGNAGTGKTQVWKTLLRTYQNIKRKPIFNDLNPKAVTNDELFGIINPATREWKDGLFSVLMRDQANITGDQPKWIV
# LDGDIDPMWIESLNTVMDDNKVLTLASNERIALTPSMRLLFEISNLRTATPATVSRAGILYINPQDLGWNPYVTSWVETRKIPAEKSNLVMLFDKYIP
# PSLETIRVRFKKITPVAEMAHIQMLCHLLNCFLIPANTPADCPKEWHELYFVFACIWAFGSAMFQDQAIDYRVEFSKWWAFSVVFQKAIAKAEPGDTL
# DLRVSNLIDCITYSVFQYTSRGLFECDKLIFASQMTFQILLMNEEVTSAELDFLLRFPIKPHVTSPVDFLTNQSWGGICSLASKDEFRNLDRDIETSS
# KRWKKLVESELPEKEKFPQEWKNKTALQRLCMIRALRPDRMTYALADFIEEKLGSKYVESRAMEFAKSYEEASPSTPIFFILSPGVNPLKDVEALGKQ
# MGFSMDLGNFHNVSLGQGQEAIAEAAMDTAAKHGHWVVLQNIHLVRKWLPVLEKKLEYYAEDSHPDYRMFLSAEPASTPSAHIIPQGILESSIKITNE
# PPTGMLANLHKALDNFTQETLEMSGKEAEFKAILFSLCYFHAVVAERRKFGPQGWNKIYPFNVGDLNISVSVLYNYLEANAKVPWEDLRYLFGEIMYG
# GHITDDWDRRLCITYLEEYMQPDLVDGELFLAPSFPAPPNTDYQGYHTYVDEMMPAESPYLYGLHPNAEIGFLTTRAENIFRTVFEMQPRDAGAGGGA
# TVTREDKVKQIVDEIIEKLPEEFNMVEIMNKVEERTPYVIVAFQECERMNFLTSEMKRSLKELDLGLKGELTITSDMEVLENSLFLDQVPPIWTQRAY
# PSLLGLNNWFIDLCLRLRELETWSTDFVLPSCVWLAGFFNPQSLLTAIMQSTARRNDLPLDKMCLQCDVTKKQKEEFTTAPRDGCCVHGIFMEGARWD
# IQQGIIMESRLKELYPSMPVINIRAITQDKQDLRNMYECPVYKTRTRGPTTYVSNLNLKTKDKPGKWILAGVALLLQT]
#
##gff-version	3
##query	GD20022%20[Drosophila%20simulans] 1 255
3R	Scipio	protein_match	4703021	4703090	1.0	+	0	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 1 23
3R	Scipio	protein_match	4721620	4721692	1.0	+	0	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 1 24
3R	Scipio	protein_match	4722040	4722299	1.0	+	2	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 24 110
3R	Scipio	protein_match	4722733	4722931	1.0	+	0	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 111 176
3R	Scipio	protein_match	4722996	4723102	1.0	+	2	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 177 212
3R	Scipio	protein_match	4723161	4723289	1.0	+	0	gene_id=kassiopeia_gene_id401029 GD20022 [Drosophila simulans];Query=GD20022%20[Drosophila%20simulans] 213 255
# protein sequence = [MGRREIKRSNTSGSTTRSYDSGSATTNFVGKFTQSVRRIVQDVKDEGAPSGMTRDEVIETNERLRSLRLRLEESYETA
# KKALINLMNKYGDSKSQRNIFQRYPMLKLMIKEVIRLETQYWTLVDIPRQEKQETVPSYVMRACSIMEKTQKSGEGVKTSARLAEEAAERRERMERLE
# HMTTAQIEHENTQLINDLYRLLKKYLGLRHLIRVLKEEYGSSKMYPIFPRYTMLKDMIKGIMHDPDYMEVCHETLANAN]
#
##gff-version	3
##query	GD20042%20[Drosophila%20simulans] 1 645
3R	Scipio	protein_match	4937469	4937720	1.0	+	0	gene_id=kassiopeia_gene_id401049 GD20042 [Drosophila simulans];Query=GD20042%20[Drosophila%20simulans] 1 84
3R	Scipio	protein_match	4937860	4938096	1.0	+	0	gene_id=kassiopeia_gene_id401049 GD20042 [Drosophila simulans];Query=GD20042%20[Drosophila%20simulans] 85 163
3R	Scipio	protein_match	4939327	4939849	1.0	+	0	gene_id=kassiopeia_gene_id401049 GD20042 [Drosophila simulans];Query=GD20042%20[Drosophila%20simulans] 164 337
3R	Scipio	protein_match	4944361	4945259	1.0	+	2	gene_id=kassiopeia_gene_id401049 GD20042 [Drosophila simulans];Query=GD20042%20[Drosophila%20simulans] 338 637
3R	Scipio	protein_match	4947058	4947980	1.0	+	2	gene_id=kassiopeia_gene_id401049 GD20042 [Drosophila simulans];Query=GD20042%20[Drosophila%20simulans] 338 645
# protein sequence = [MNETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSA
# TWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHT
# LYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPDFAPIDGSAEIRIAAIDSTSTSTTATSTTTATSSSTTETEMDLDLLNAPPQN
# RPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGS
# TQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSYPSSENISELAGHGEVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVG
# KGLPELGRRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVN
# PMIYALFSKDFRFAFKRIICRCFCSRQSVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMSNDPR]
#
##gff-version	3
##query	GD20127%20[Drosophila%20simulans] 1 272
3R	Scipio	protein_match	6429934	6429950	1.0	+	0	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 1 6
3R	Scipio	protein_match	6436425	6436455	1.0	+	1	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 7 16
3R	Scipio	protein_match	6436535	6436646	1.0	+	0	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 17 53
3R	Scipio	protein_match	6436711	6436862	1.0	+	2	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 54 104
3R	Scipio	protein_match	6436986	6437063	1.0	+	0	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 105 130
3R	Scipio	protein_match	6437268	6437348	1.0	+	0	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 105 131
3R	Scipio	protein_match	6437521	6437630	1.0	+	0	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 131 167
3R	Scipio	protein_match	6437694	6437873	1.0	+	1	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 168 227
3R	Scipio	protein_match	6438006	6438141	1.0	+	1	gene_id=kassiopeia_gene_id401132 GD20127 [Drosophila simulans];Query=GD20127%20[Drosophila%20simulans] 228 272
# protein sequence = [MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYKIYHLQSKVPAYIR
# LLAPKGSLEIHEEAWNAYPYCRTIITNPKFMKDAFKIIIDTLHVGDAGDSENVHELTPDKLKVREVVHIDIANDPVLPADYKPDEDPTTYQSKKTGRG
# PLVGSDWKKHVNPVMTCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEELDKARQVGEVRGMRADAD]
#
##gff-version	3
##query	GD20205%20[Drosophila%20simulans] 1 2270
3R	Scipio	protein_match	7755626	7755735	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1 37
3R	Scipio	protein_match	7756178	7756382	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 38 105
3R	Scipio	protein_match	7758100	7758225	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 106 147
3R	Scipio	protein_match	7758286	7758642	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 148 266
3R	Scipio	protein_match	7758741	7759338	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 267 465
3R	Scipio	protein_match	7762319	7762433	1.0	+	2	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 466 504
3R	Scipio	protein_match	7766501	7766864	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 505 625
3R	Scipio	protein_match	7767944	7768190	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 626 707
3R	Scipio	protein_match	7768324	7768629	1.0	+	2	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 708 809
3R	Scipio	protein_match	7769159	7769772	1.0	+	2	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 810 1014
3R	Scipio	protein_match	7769891	7770028	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1015 1060
3R	Scipio	protein_match	7770093	7770227	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1061 1105
3R	Scipio	protein_match	7770901	7771086	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1106 1167
3R	Scipio	protein_match	7772231	7772416	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1106 1167
3R	Scipio	protein_match	7774659	7774781	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1168 1208
3R	Scipio	protein_match	7775663	7776055	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1209 1339
3R	Scipio	protein_match	7776244	7776587	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1340 1454
3R	Scipio	protein_match	7777952	7778660	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1455 1690
3R	Scipio	protein_match	7781087	7781669	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1691 1884
3R	Scipio	protein_match	7781888	7781993	1.0	+	2	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1885 1920
3R	Scipio	protein_match	7782364	7782603	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 1921 2000
3R	Scipio	protein_match	7784203	7784243	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 2001 2013
3R	Scipio	protein_match	7785319	7785538	1.0	+	2	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 2014 2087
3R	Scipio	protein_match	7786647	7786824	1.0	+	1	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 2088 2146
3R	Scipio	protein_match	7786887	7787054	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 2147 2202
3R	Scipio	protein_match	7787115	7787318	1.0	+	0	gene_id=kassiopeia_gene_id401206 GD20205 [Drosophila simulans];Query=GD20205%20[Drosophila%20simulans] 2203 2270
# protein sequence = [MDEMPDLSHLTPHERMQIENVLMRQKQEEEKQNEIMRRKQDEVVTLEMQIRQRSEQQKKAGVELDATCHICLKTKFAD
# GVGHICHYCNIRCCARCGGKVTLRSNKVIWVCILCRKKQELLSKTGQWINKTAAQQDGFIRRIEPDGSSDISQHPIVDPHDTTDKRPKLERTRSAAEK
# ENLPMQRAGSMLRRQYSQQEQPTNRRLSASDSGMDPVMSPGQQMQHHQQQQRARMQPMNPQQGQQGYGMQQQQQPRSGGAYPDDDPRYYQGELDGLMR
# QHPHLAHPSQVQPQHPPQSHSQQQQSQHQQQHLMPQQHRPSPQQHSQQQQQQHSQQFAARQQQQQQHQQQVQQSYHAQIHQQPQQHPHPHSQQQQQQH
# QQMQQQHGQPVPQMGGYQKPPPLTRNLTISGGHAMDSSAYSQQQQQQQQRRALAGSQYASQQQRSFSSSEEEFQHQLLAAQGAVTVTAGSDYDAPALL
# EGKDKHVDFATEIRLEGGKHKQQHTHRKNALTLSYWDEPATSSSSSAAQDSRRFTERRIKKTVRFDAHDEEASILASSSLPPVTAILPSTAVDVGAAT
# ILSSGKSLDAGGVGGADWSRWEAERQGSQDSATKDSGIDTSSTFTSSEDSNRGDGPKNPVNWQTSADNTRLIGHMILRKYYDGEDILGLKVNGGQPLA
# TGGSGSGAGTGAAVGAGGPCGAIVEKVKRGSVADLEGRIRPGDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGSGGGSGGSSTNVSPI
# SGASGGSANSVPARRSSANFPHSGLASSMAGSAVVSSGGRYLQRKAPAVEAIEIHRDKPSVLITSPGSPDIHTSVSGPGSVSGSGLRQRGGVGQTQRL
# GPSHSTHSHSSSGSGSGSGSSTSSVHAPASAHGPVHASASASGSAPGGLHGTTTAGHHHHPHPHHYHPHQHPLPHPHQHQGPPAAHLQGHGVGGGIGM
# GSGSGTTTQPIPIEGRLQLKLGYDQNTLQLIVTLVCATGLSLRQSGAGRNPYAKVFLLPDRSHKSKRRTKTVGTTCEPRWGQTFVYSGLRRCDLNGRL
# LEVTLWDYVRYGANDFIGEVVIDLAHHILDDEAEWYQLQPHQDTSYLLRDEGSDVDGLILTPTDHLSPPSTMSRLSDSDTTSDCDIDGMTPGASISSM
# GSSASPPPLLELDLNERRSRRDMSPQGRKRVAGMVARDYRTVSGIGQSYHNQASATGYYRRGGGNGVGSAIGPGGMSLSQRSHSAAPSDGYHSSGVGG
# APSGGPAYGYRSTSPRRGSLSPPDDRYIDYPVLPVHGSSPNAPSVYQGPGGASSAAASASQQQRFQSRSATATPTGSPKKRQLPQVPQTSRSAMLRDR
# LGQDFDERLASGGRFGRHRTRQPHHQATYRSTGMGGWERHYTGLSDSDLHSMDARMRPRHSLSPDKDFMGEFGDSDMESVVSVTSSAFSTQSERPRTS
# RGLSFPRNWRNLFGVRNSFLGGAGGEPITGLRLHHSEPGRANTIEVDDCDYLPVGGAQQLVLLEQLEQLQQLAALAAADSPPISAGIGIQPPHQVLVT
# DANSGQLVEQFYVEPGTMAEEMMEPLDPHLHPHSVFYSPSPHLPPQPFDIDIDNIYPPRRSNGLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFR
# SSSPAGVHPHAHDHTSTTPSSLVGYVRDHQDKSCSHCQNGSQPVSSSFANPQPPPPQQQQQLHGSPNNLNNNNKRAPSSTPQQNTNTINDANNLTLDA
# TQQQSQQQQQLQQPPNTCTNQNTNPTTTLTTTTTTSSNATNAATTTTANATNATTTATNPKTTTTNNTNEPNATTTTTTTNANADADADADADAPLDA
# IDWDAIDAMLDDDFSEYDKDKNGAEEAGGSKSAEGAGAEDKVDGSLSDTANDRKKGGGVDQERSPKGGSGMGKKSNSTRMGFGKKGKNSFTVHRSEEV
# LPGDITRELRTGGGLGVSLGGAGGAAGGSGGAGGGGLSRGSSSEADAIEQFFGDGAGGESLDTWLQLRLFVVSEQEQYQAQFAIAGSSTSSAGHHHIT
# LPPPHPYHQRQSRGSAGSIQRSVEVPPVPPVTRYSAGSIHSITSSEGSSFSPSLRNDGALNEFVDGLGPGQLVGRQVLGAPSLGDIQLSLCHQKGCLE
# VEVIRARGLQQKAQSKMLPAPYVKVYLVSGKRCVDKMKTSSARRTLDPLYQQQLVFKQSYTGCILQITVWGDYGRIEKKVFMGVAQIMLDDLNLSNIV
# IGWYKLFGTTSLVSCPTNIGLGSRRSSIASLDSLKL]
#
##gff-version	3
##query	GD20587%20[Drosophila%20simulans] 1 495
3R	Scipio	protein_match	13325898	13326054	1.0	+	0	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 1 52
3R	Scipio	protein_match	13326108	13326308	1.0	+	2	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 53 119
3R	Scipio	protein_match	13326371	13326556	1.0	+	2	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 120 181
3R	Scipio	protein_match	13326612	13326684	1.0	+	2	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 182 206
3R	Scipio	protein_match	13326743	13326869	1.0	+	1	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 207 248
3R	Scipio	protein_match	13326923	13327496	1.0	+	0	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 249 439
3R	Scipio	protein_match	13327563	13327623	1.0	+	2	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 440 460
3R	Scipio	protein_match	13327636	13327723	1.0	+	1	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 461 489
3R	Scipio	protein_match	13327920	13328025	1.0	+	1	gene_id=kassiopeia_gene_id401577 GD20587 [Drosophila simulans];Query=GD20587%20[Drosophila%20simulans] 461 495
# protein sequence = [MIVIQLLIAASIILWIRFLWSRRKLYMLMMQLPGRMGLPLLGNSLGYLIISRGRMSSRTMYMDRHGSTYMAWIGTTPI
# VVTRDPEIAEKVLTSPLCINRSSQITNALALSMGYGLLTLQGSKWMARRKHMNPAFKHSVLLSFFPIFNAETDLLVGVFDSFVGQGEKDVLADLIKWS
# YTIATQTTLGTDVTKDDSFENDAVLKSYQSILRLTIINIFVPFVQNKIVSKLFGLEWLRRRDTSTINKMISNILDKKLNSNPENYSESESKTVIHRAI
# ELFRNDEMSLMELRAECSSMILAAFETSGHTVYYALVLLAMFPEHQEMVFNEIKEHFPLAKDFEVTHTDLQQLVHLDRVLNETLRLIPSIPLSTRETL
# EDLRLSNGVVIPKGVSISIDIFNTQRNSDYWGSEAAQFNPENFLPEKIQDRHPYAFIPFSKGRRNCIGWRYGLMSSKLALVKILRNYQNYMLCTTFLY
# KDLRFIDNTAMKLAEQPLLAVKPRI]
#
##gff-version	3
##query	GD20771%20[Drosophila%20simulans] 1 839
3R	Scipio	protein_match	15817352	15817454	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 1 34
3R	Scipio	protein_match	15817617	15817927	1.0	+	2	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 35 138
3R	Scipio	protein_match	15817989	15818660	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 139 362
3R	Scipio	protein_match	15818987	15819043	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 363 381
3R	Scipio	protein_match	15819190	15819743	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 382 566
3R	Scipio	protein_match	15819808	15819981	1.0	+	1	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 567 624
3R	Scipio	protein_match	15820070	15820209	1.0	+	1	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 625 670
3R	Scipio	protein_match	15820302	15820387	1.0	+	2	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 671 699
3R	Scipio	protein_match	15820879	15820964	1.0	+	2	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 671 699
3R	Scipio	protein_match	15821160	15821226	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 700 721
3R	Scipio	protein_match	15821290	15821531	1.0	+	2	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 722 802
3R	Scipio	protein_match	15821604	15821714	1.0	+	0	gene_id=kassiopeia_gene_id401753 GD20771 [Drosophila simulans];Query=GD20771%20[Drosophila%20simulans] 803 839
# protein sequence = [MYILIYISIPKHPQADKTRTIYPSTLGTELRTELGKQKIYCAKCTKKCSGEVLRVADNHFHKACFQCCQCKKSLATGG
# FFTKDNAYYCIPDYQRLYGTKCANCQQYVEGEVVSTMGKTYHQKCFTCSKCQQPFKSGSKVTNTGKEVLCEQCVTGAPVSPSRQATSGGVSSPAPPAE
# SPTRATAHQQHGGVISHKAHLKEDYDPNDCAGCGELLKEGQALVALDRQWHVSCFRCKACQAVLNGEYMGKDAVPYCEKCYQKGFGVKCAYCSRFISG
# KVLQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQGSAIWHPRCGPGPSESGIILNGGGGTTSVVGGASNGNFTDTECDRMSSSALSEMYIRSRTPSFN
# GSLYSSSRKHYRTVSPGLILREYGRPNAEDISRIYTYSYLTDAPHYLRKPIDPYDKTPLSPHFHRPSSYATTASNAGSVAGSRPPSRPHSRTRSAMKV
# LVDAIRSETPRPKSPGMNNEEPIELSHYPAAKKPPPGEQPKIERDDFPAPPYPYTDPERRRRYSDTYKGVPASDDEDENVENGKPNGKVKNGEEQQRL
# QREAEQLEKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPVYKLRYESPIGASPSRNLDHQKPFYEDEMFDRSTSYRGSLGKSLGNA
# PSYNAIHSYRSPPKPGYGFKTTTLPYIRNGFSSDFSYGGLGDKTHSTDLSCGKSEASVDSITEGDRRALMGGDLPASSTYSGALSYHYPQAGLIRRSL
# PNMSHSMLVHEPAKIYPYHLLLITNYRLPSDVDRCNLERHLSDIEFEHILQCARSEFYRLPQWRRNELKRRVKLF]
#
##gff-version	3
##query	GD21109%20[Drosophila%20simulans] 1 857
3R	Scipio	protein_match	20208111	20208133	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 1 8
3R	Scipio	protein_match	20215685	20216174	1.0	+	1	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 9 171
3R	Scipio	protein_match	20216231	20216782	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 172 355
3R	Scipio	protein_match	20216842	20217012	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 356 412
3R	Scipio	protein_match	20217250	20217335	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 413 441
3R	Scipio	protein_match	20217628	20217725	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 413 445
3R	Scipio	protein_match	20218388	20218473	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 413 441
3R	Scipio	protein_match	20218746	20218794	1.0	+	1	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 442 457
3R	Scipio	protein_match	20218859	20219035	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 458 516
3R	Scipio	protein_match	20219106	20219537	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 517 660
3R	Scipio	protein_match	20219839	20220342	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 661 828
3R	Scipio	protein_match	20220614	20220700	1.0	+	0	gene_id=kassiopeia_gene_id402084 GD21109 [Drosophila simulans];Query=GD21109%20[Drosophila%20simulans] 829 857
# protein sequence = [MYEHWANRDNSPSVPLAEFTIPPDPTETESFVPLAEAKKMSESPNPPVTPTTPTGNGTPPTQTTNGNSTVATKSVSDD
# NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQLAKTSEKKRDIAKASALASEKDVILARIDELPAWVYFPDVERCEWLNKILKQV
# WPNANHFARTLVKETIEPNVALALANYKMNGFRFDRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLFYASDCDINFYLGGMKGGIKDFQIHGWVRVV
# MKPLIRSMPLVGGLQIFFLNNPNIDFNLVGVIDFMDMPGLSDLLRRIIVEQIGNVMVLPNKLPISLSEEVSAVALKMPEPEGILRIHVVEAKDLMKKD
# ISVLGKGKSDPYAIINVGAQEFKTQIIDNNVNPKWDYWCEATVFIEMGQFVEIQLKDSDDSKKDENLGRASIDIASVIKKGVVDSWLTLEDAKHGLLH
# VRLQWYKLTADPNDLQQILLETQLLRVTSMSSAVLSVFIDSARHLKQARSSSKPDPYLVCSVNKQKQQTAMIMRDDSPVWEQGFTFLVSNPDNESLNI
# KIYDQKTGNDIGQYTYTLSTLLKQFNMEVIQQPFQLQKSGPESKLYMSLSLRILKPGEIDKESDALEQVAALTRSSSVKTPDVAAVSPPAFKESQASS
# KRLSAESPISEEDPVAATKISPAMSASTSSEKPISELATSVLTHRFPDSTSSPGEHGLGRMQLSIRYSAQRQKLDVTIHKIQKIPLRDPSNIPDPYVK
# LYLLPGRTKESKRKTSVIKDNCNPVYDASFEYLISIAELRQTELEVTVCTQKGFLSGGSPIIGMLKIPLDDAEITTQTGLNSWFDLQPEIRHE]
#
##gff-version	3
##query	GD21120%20[Drosophila%20simulans] 1 691
3R	Scipio	protein_match	20337359	20337406	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 1 16
3R	Scipio	protein_match	20338004	20338342	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 17 129
3R	Scipio	protein_match	20342762	20342920	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 130 182
3R	Scipio	protein_match	20343120	20343231	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 183 219
3R	Scipio	protein_match	20343513	20343664	1.0	+	2	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 220 270
3R	Scipio	protein_match	20343981	20344148	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 271 326
3R	Scipio	protein_match	20345589	20345680	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 327 357
3R	Scipio	protein_match	20347822	20347913	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 327 357
3R	Scipio	protein_match	20350594	20350685	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 327 357
3R	Scipio	protein_match	20355416	20355526	1.0	+	1	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 358 394
3R	Scipio	protein_match	20356051	20356173	1.0	+	1	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 395 435
3R	Scipio	protein_match	20357560	20357708	1.0	+	1	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 436 484
3R	Scipio	protein_match	20363039	20363113	1.0	+	2	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 485 509
3R	Scipio	protein_match	20363971	20364003	1.0	+	2	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 510 520
3R	Scipio	protein_match	20364068	20364257	1.0	+	2	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 521 584
3R	Scipio	protein_match	20366521	20366698	1.0	+	1	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 585 643
3R	Scipio	protein_match	20366766	20366909	1.0	+	0	gene_id=kassiopeia_gene_id402094 GD21120 [Drosophila simulans];Query=GD21120%20[Drosophila%20simulans] 644 691
# protein sequence = [MASGLIDTNFSSTLANGMSGCDQSTVESLADDPTDSPFDADDCLKVRKYWCFLLSSIFTFLAGLLVVLLWRAFAFVCC
# RKEPDLGPNDPKQKEQKASRNKQEFEGTFMTEAKDWAGELISGQTTTGRILVVLVFILSIASLIIYFVDASSEEVERCQKWSNNITQQIDLAFNIFFM
# VYFFIRFIAASDKLWFMLEMYSFVDYFTIPPSFVSIYLDRTWIGLRFLRALRLMTVPDILQYLNVLKTSSSIRLAQLVSIFISVWLTAAGIIHLLENS
# GDPLDFNNAHRLSYWTCVYFLIVTMSTVGYGDVYCETVLGRTFLVFFLLVGLAMFASSIPEIIELVGSGNKYGGELKREHGKRHIVVCGHITYESVSH
# FLKDFLHEDREDVDVEVVFLHRKEPDLELEGLLKRHYTTVAFFQGTMMNAVDLERVKVHKHTPKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVK
# VKQKCIFILSVLYVYEHHPAPTFTPPELPKRVHVRGSVSGDITRDREDTNLLNRNVRRPNGTGNGTGGMHHMNNTAAAAAAAAAAGKQVNKVKPTVNV
# SRQVEGQVISPSQYNRPTSRSSGTGTQNQNGGVSLPAGIADDQSKDFDFEKTEMKYDSTGMFHWSPAKSLEDCILDRNQAAMTVLNGHVVVCLFADPD
# SPLIGLRNLVMPLRASTSTTTSCPT]
#
##gff-version	3
##query	GD21256%20[Drosophila%20simulans] 1 1287
3R	Scipio	protein_match	21656875	21656931	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1 19
3R	Scipio	protein_match	21657175	21657318	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 20 67
3R	Scipio	protein_match	21657426	21657810	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 68 195
3R	Scipio	protein_match	21657866	21657963	1.0	+	2	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 196 228
3R	Scipio	protein_match	21662155	21662609	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 229 380
3R	Scipio	protein_match	21662669	21664268	1.0	+	1	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 381 913
3R	Scipio	protein_match	21665768	21666022	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 914 998
3R	Scipio	protein_match	21666084	21666179	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 999 1030
3R	Scipio	protein_match	21666731	21666820	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1031 1060
3R	Scipio	protein_match	21667141	21667343	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1061 1128
3R	Scipio	protein_match	21667404	21667526	1.0	+	1	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1129 1169
3R	Scipio	protein_match	21667548	21667599	1.0	+	1	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1170 1186
3R	Scipio	protein_match	21668991	21669060	1.0	+	1	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1170 1192
3R	Scipio	protein_match	21669126	21669291	1.0	+	0	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1193 1247
3R	Scipio	protein_match	21669468	21669586	1.0	+	2	gene_id=kassiopeia_gene_id402227 GD21256 [Drosophila simulans];Query=GD21256%20[Drosophila%20simulans] 1248 1287
# protein sequence = [MTQKPGEWASALLARFEDQLPNRIGAYGTQARMSQDQLVACLIHISRYRFSLVISGLTKMLQRVNEAALQNRHEPERC
# YFESLVIILTTLERCLTNQTKDTARFEEAMNVKLLLREISQFVDVQSDSNPNAAQLKALASKVLFALSQNHFSAVFNRISARIQELTSCSEENPDYND
# IELIQHIDMDMIKLTKLLQETITKFRSKRAPPLILLYSLESYLELDRVPSTRITLKLDERFFIQIASDCETVDQTSHSMSFISDANVLALHRLLWTHQ
# EKIGDYLSSSRDHKAVGRRPFDKMATLLAYLGPPEHKPVDSHMMFSSYARWSSIDMSSTNFEEIMVKHQMHEKEEFKTLKSMNIFYQAGTSKSGYPVF
# YYIARRYKIGETNGDLLIYHVILTLKPFCHSPFEVVIDFTHTCSDNRFRTEFLQKWFYVLPTVAYENVHAVYIYNCNSWVREYTKFHDRILAPLKGNR
# KLLFLESPNKLTDFIDAEQQKLPGATLSLDEDLKVFSNALKLSHKDTKVAIKVGPTALQITSAEKTKVLAHSVLLNDVYYASEIEEVCLVDDNQFTLS
# ITNESGQLSFIHNDCDNIVQAIIHIRNRWELSQPDSVTVHQKIRPKDVPGTLLNMALLNLGSCDPNLRTAAYNLLCALTATFDLKIEGQLLETQGLCI
# PSNNTIFIKSVSEKLATNEPHLTLEFLEESIQGFQRSTIELKHLCLEYMTPWLKNLVKFCKSNDDSKKLKVSQILDKLINLTIDQKEMYPSVQAKIWG
# SIGQIPELIDMVLDNFLHKSITYGLGSPQVEIMADTAVALASANVQLVSKKVITRICRVMDKSCTNPTQYLEQHMMWDDIAILGRYLLMLSFNNCLDV
# ATSVPYLFHTITFLVCSGSLSMRASTHGLVINIIHSLCTCTNPFFSEEAQRGFRHPTPTTVSRTSRVLTMLLGIIAKPLHRDKFEVTPDSVAYLTALV
# AVSEEVRSRCHVKHALPRWPADLSSSVENGEASGGVQAIGLPLSRRQKSWDILDQSALQFARQHKVPTLQNARVLFKTQRSFSVPTTKDPNNATGIEE
# RQERGSRSSVSNESNVLLDPEVLPDLSIQALVLTVLATLVKYSSDEGETRVLYQYLAEGSVVFPKVFPVIHSLLDQKINNILSVSHDQVVLNSVQNII
# QNMLASEDPSQQHSSCTSCRVVDLADSGDLLVPFTKYNMMGESSELFVNCLEAMVETCLPGDESAPVPPSPRPYNLSSSLSSLTLGSPTDKAFSSESL
# DFYDNCPGSVSSLRRASHSKSRAKHRINDSPSH]
#
##gff-version	3
##query	GD21334%20[Drosophila%20simulans] 1 118
3R	Scipio	protein_match	22912515	22912565	1.0	+	0	gene_id=kassiopeia_gene_id402302 GD21334 [Drosophila simulans];Query=GD21334%20[Drosophila%20simulans] 1 17
3R	Scipio	protein_match	22912936	22912986	1.0	+	0	gene_id=kassiopeia_gene_id402302 GD21334 [Drosophila simulans];Query=GD21334%20[Drosophila%20simulans] 1 17
3R	Scipio	protein_match	22915720	22916019	1.0	+	0	gene_id=kassiopeia_gene_id402302 GD21334 [Drosophila simulans];Query=GD21334%20[Drosophila%20simulans] 18 117
3R	Scipio	protein_match	22916085	22916087	1.0	+	0	gene_id=kassiopeia_gene_id402302 GD21334 [Drosophila simulans];Query=GD21334%20[Drosophila%20simulans] 118 118
# protein sequence = [MSKSSQDREVVARKRAAHHRPLRGEQNTPHELHQQRREGAYTVEGLPCFGPDGVTDGAVEAAVDVPETDPDPAQLTVT
# QSQSSSSAARRRLAEGCTSLMYACQRGDIVQVLAQMREKF]
#
##gff-version	3
##query	GD21367%20[Drosophila%20simulans] 1 377
3R	Scipio	protein_match	23791345	23791588	1.0	+	0	gene_id=kassiopeia_gene_id402334 GD21367 [Drosophila simulans];Query=GD21367%20[Drosophila%20simulans] 1 81
3R	Scipio	protein_match	23791766	23791934	1.0	+	2	gene_id=kassiopeia_gene_id402334 GD21367 [Drosophila simulans];Query=GD21367%20[Drosophila%20simulans] 82 138
3R	Scipio	protein_match	23792604	23793163	1.0	+	1	gene_id=kassiopeia_gene_id402334 GD21367 [Drosophila simulans];Query=GD21367%20[Drosophila%20simulans] 139 324
3R	Scipio	protein_match	23793790	23794325	1.0	+	1	gene_id=kassiopeia_gene_id402334 GD21367 [Drosophila simulans];Query=GD21367%20[Drosophila%20simulans] 139 316
3R	Scipio	protein_match	23795935	23796092	1.0	+	2	gene_id=kassiopeia_gene_id402334 GD21367 [Drosophila simulans];Query=GD21367%20[Drosophila%20simulans] 325 377
# protein sequence = [MRNCCRCPAPDLRANSSQDGGAAAEAEGATMPRKSFLFRPQFPRTTSAPLWVFPKDAQVYLLWSWQKVIQKIKYNKIK
# GQGARAAPRAPPDPPAPPAFGSTVWAINLDACPATRSMTLLNLKGMRLGSKTISGKRKSSIVRLGQWSIKQKHSIRYRIDEYQVQSSYIHRFYDKSNF
# GHDVALLELQNEVLYKAHIRPICLWLDKFDIDTQKIERFQTFRWGIEEKFILPAAKTRKMEHIRKVNCENAFKFYPQSSHICASFENKRNCVETGSPL
# FNKIRYHKNTRYNLFGIQSYGESGTCLYTDVTKYMDWIMGIILNVDVIVSRPDRTKGRPGELAAATPANCVVLYSHASDSRQLRGDGCSYSNSFFDLH
# GRCLK]
#
##gff-version	3
##query	unc%2D13%20[Drosophila%20simulans] 1 1194
4	Scipio	protein_match	709452	709523	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 1 24
4	Scipio	protein_match	709058	709277	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 25 97
4	Scipio	protein_match	708876	708996	1.0	-	2	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 98 138
4	Scipio	protein_match	708531	708637	1.0	-	1	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 139 173
4	Scipio	protein_match	707755	707861	1.0	-	1	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 139 173
4	Scipio	protein_match	703623	703764	1.0	-	2	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 174 221
4	Scipio	protein_match	702189	702513	1.0	-	1	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 222 329
4	Scipio	protein_match	701833	702105	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 330 420
4	Scipio	protein_match	701612	701770	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 421 473
4	Scipio	protein_match	701434	701559	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 474 515
4	Scipio	protein_match	700716	700883	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 516 571
4	Scipio	protein_match	700376	700657	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 572 665
4	Scipio	protein_match	697302	697523	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 666 739
4	Scipio	protein_match	697050	697216	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 740 795
4	Scipio	protein_match	696691	696982	1.0	-	1	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 796 892
4	Scipio	protein_match	696272	696629	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 893 1011
4	Scipio	protein_match	695256	695354	1.0	-	2	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 1012 1044
4	Scipio	protein_match	695027	695189	1.0	-	2	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 1045 1099
4	Scipio	protein_match	694834	694960	1.0	-	1	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 1100 1141
4	Scipio	protein_match	694610	694768	1.0	-	0	gene_id=kassiopeia_gene_id405225 unc-13 [Drosophila simulans];Query=unc%2D13%20[Drosophila%20simulans] 1142 1194
# protein sequence = [MAATKRNAGLTSAVPRATLNDEDLKMHVYKKALQALIYPISSTTPHNFLLWTATSPTYCYECEGLLWGIARQGVRCTE
# CGVKCHEKCKDLLNADCLQRAAEKSSKHGAEDKANSIITAMKDRMKQREREKPEIFELIRAVFSVEEKSHTGHMKAVKQSVLDGTSKWSAKIAITVIC
# AQGLIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFHFECHNSSDRIKVRVWDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVW
# YNLEKRTDKSAVSGAIRLHISVEIKGEEKVAPYHVQYTCLHENLFHYLCEENTGMVKLPTQKGDDAWKLYFDEIPEEIVDEFSMRYGIENIYQAMTHF
# HCLSAKYLCPGVPAVMSTLLANINAYYAHTTASSAVSASDRFAASNFGKEKFVKLLDQLHNSLRIDLSMYRNNFPASSPEKLMDLKSTVDLLTSITFF
# RMKVQELSSPPRASTVVKDCVKACLRSTYQFLFENCYELYNREFQVDPNEAKRAPDDHEPKLDSVDFWHKLIALIVSVIDEDKNSYGTVLNQFPQELN
# IGQLSASSMWHLFAVDMKYALEEHEQHRLCKSSAYMNLHFRVKWLYSNYVKEVPPYKGAVPDYPAWFEPFVMQWLNENDDVSLEYLHGAFKRDKKDGF
# QKSSEHALFSNSVVDVFTQLTQCFDVVSKLECPDPEIWKRYMRRFAKTIVKVLIAYADIVKLEFPEHMKDERIACILMNNIQQLRVQLEKMFESMGGD
# KLEEDAANILKELQQNLNSALDDLASQFAISLEPRITQSVRELGDMLLSIKGGSGTLAAGNLAAQRNAVAVEADEVLRPLMDLLDGSLTLYAQSCEKT
# VLKRLLKELWKIVMRILEKTIVLPPMTDKTMMFKHLTDNAKNLASNAKIEDMGRLFKSHMAGKQDVKSALSGVMDISKEVEKNLSPKQCAVLDVALDT
# IKQYFHAGGNGLKKTFLEKSPELQSLRYALSLYTQMTDTLIKTFISSQVHEVDLENSEESVGEISVQIDLFSHPGTGEHKVNVKVVAANDLKWQIPSG
# MFRPFVDINLIGPHLQEKKRKFATKSKSNNWSPKYNESFSFTIGNEEQLDFFELHICVKDYCFARDDRLVGVAVIPLKDISEKGSVACWLPLMRRIEM
# DETGWTILRILSQRNNDEVAKEFVKLKSEIRQEPTMGT]
#
##gff-version	3
##query	GD24415%20[Drosophila%20simulans] 1 1005
4	Scipio	protein_match	580270	580581	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 1 104
# gap 105 112
4	Scipio	protein_match	581972	582133	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 113 166
4	Scipio	protein_match	582558	582699	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 167 213
4	Scipio	protein_match	583479	583653	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 167 224
4	Scipio	protein_match	583907	584039	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 167 210
4	Scipio	protein_match	585255	585478	0.992	+	2	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 214 288
4	Scipio	protein_match	585541	585943	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 289 422
4	Scipio	protein_match	586036	586709	0.992	+	2	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 423 647
4	Scipio	protein_match	587772	588125	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 648 765
4	Scipio	protein_match	588489	588533	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 766 780
4	Scipio	protein_match	588845	588967	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 781 821
4	Scipio	protein_match	589044	589103	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 822 841
4	Scipio	protein_match	589276	589374	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 842 874
4	Scipio	protein_match	743811	744203	0.992	+	0	gene_id=kassiopeia_gene_id405268 GD24415 [Drosophila simulans];Query=GD24415%20[Drosophila%20simulans] 875 1005
# protein sequence = [MGVAEDFAPSFVKKPQLHQEDDGNRLIFECQLLSSPKPDIEWFRSDNKVVEDVRTKFKIQPVGENKYTVVLELDDVVE
# TDAGLYKVKAKNKSGEVSASINLNFS........QIDGFAPTFAKKPAIRQEEDGKRLLFECRVNADPIPAIIWFHNGAAVKESERHKITVDKDVHSY
# FATLEILNVTVEDAGKYKVNAKNELGESNATISLNFDSASDANGFAPSFIEKPRIIPNESGTLITMKCKCKAKPEPTVTWYRGQDLVEKSKKIKINTT
# VIAEDTYELTLEIKDPGATDGGTYRCNVKNEYGESNANLNLNIEAEPEPEGEGPTFIEKPRIVSENNGKLVIMECKVKADPKPDVIWFRNGEVIKESN
# KIKTFIEQRGDQYYIKLELLDPQLEDSGLYKCNIKNTLGELNANLTLNIEIVPVIKDKPKIIKIIKKRTVVIECTVASKFEPKCTWYKETSSVKESKR
# HVYLVEQTKEGEFAVKLEINDVEESDKGAYKLVASNEKGEAVSQIVNLVDIPEEERKPCKPEISRKLADQKVAESKTFELIVSLSQSDRKCKVEWYKG
# STVIRETKDITTTFDGTTARLTFSSARTEHTSNYKVIVTNEVGKDESSCKITVEKGGKKKEEKPKEKEKTKNEKEVEQKEMEEDKNPSDQSVAQTEGR
# INVEQINKGDPEEELTEKKEILDKKDAQEVKESSVELQDSAGHEAPEPKKAKSDSKLDQSHQKNSDKMHKPGQSESESKTNKNESTAEPIKTNKQDSG
# EQQATEQIGLKKVDRKASIVSVKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTESRRSSIIDKKPLEQVDNRPIDANKNPQPLKEEIP
# RLKPAEKRRTSKVQTTTLCISISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSAPTGVAVGTNASS
# STLPTQNSPHLDEASAQTNVVHKSNGEFLPEVGERFEPICHRVNK]
#
##gff-version	3
##query	GD17682%20[Drosophila%20simulans] 1 131
chr2h_Mrandom_009	Scipio	protein_match	95070	95253	1.0	-	0	gene_id=kassiopeia_gene_id398857 GD17682 [Drosophila simulans];Query=GD17682%20[Drosophila%20simulans] 1 61
chr2h_Mrandom_009	Scipio	protein_match	48234	48442	1.0	-	2	gene_id=kassiopeia_gene_id398857 GD17682 [Drosophila simulans];Query=GD17682%20[Drosophila%20simulans] 62 131
chr2h_Mrandom_009	Scipio	protein_match	46682	46890	1.0	-	2	gene_id=kassiopeia_gene_id398857 GD17682 [Drosophila simulans];Query=GD17682%20[Drosophila%20simulans] 62 131
# protein sequence = [MLENASPNASTNYLLWKLTNNLKRQVIPKAPIRNPAGGWCGSSQEKANIFESSSNGMREMASYTKQQAYLQRSKPKRE
# FGTRMEGNERNMSLETTGGRPITTFRGRHCKTTPVAANNINIAAAGIEAGKGH]
#
##gff-version	3
##query	GD11935%20[Drosophila%20simulans] 1 331
chr3h_Mrandom_013	Scipio	protein_match	63133	63218	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 1 29
chr3h_Mrandom_013	Scipio	protein_match	62530	62623	1.0	-	1	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 30 60
chr3h_Mrandom_013	Scipio	protein_match	60478	61113	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 61 272
chr3h_Mrandom_013	Scipio	protein_match	40758	40880	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 273 313
chr3h_Mrandom_013	Scipio	protein_match	40593	40646	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 314 331
chr3h_Mrandom_013	Scipio	protein_match	39676	39798	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 273 313
chr3h_Mrandom_013	Scipio	protein_match	39511	39564	1.0	-	0	gene_id=kassiopeia_gene_id393369 GD11935 [Drosophila simulans];Query=GD11935%20[Drosophila%20simulans] 314 331
# protein sequence = [MDLYHPNMENSLQTPTGEAENYSDKCSSAMPADPSEEVAPQVPKTELEELQISAQGVADEPTQLLLRLFLHVIVAISS
# VHFVIGHLPCLLFTFRNSLEAMPTGGYANWLDFYSMFTTIIYIHPDLISNKKRQHLSAASCLMDTALVTIRRSLNISDGNYAIFQAHVTEILGLRAMQ
# IGSVSMLRELSDKFNAHIGALNGMGSTEQIAGCIIAQVLVQKLDPARQAKWEEHWEDPVFKNANPTWEFMASFLKQRCRSLENMEFAMASFATGSQPL
# SNEEDFDMVVVSSSDDNEPCSSKKALIRASRKTTRNNQRALNSGTCAVQCNSSDTYR]
#
##gff-version	3
##query	GD19889%20[Drosophila%20simulans] 1 293
chrU_M_3405	Scipio	protein_match	4980	5049	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 1 23
chrU_M_3405	Scipio	protein_match	3107	3251	1.0	-	2	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 24 72
chrU_M_3405	Scipio	protein_match	2872	3039	1.0	-	1	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 73 128
chrU_M_3405	Scipio	protein_match	2419	2444	1.0	-	1	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 129 136
chrU_M_3405	Scipio	protein_match	2332	2360	1.0	-	2	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 137 146
chrU_M_3405	Scipio	protein_match	2169	2252	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 147 174
chrU_M_3405	Scipio	protein_match	1618	1701	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 175 202
chrU_M_3405	Scipio	protein_match	1481	1552	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 203 226
chrU_M_3405	Scipio	protein_match	1344	1415	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 203 226
chrU_M_3405	Scipio	protein_match	1205	1276	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 203 226
chrU_M_3405	Scipio	protein_match	1068	1151	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 203 230
chrU_M_3405	Scipio	protein_match	718	882	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 231 285
chrU_M_3405	Scipio	protein_match	280	303	1.0	-	0	gene_id=kassiopeia_gene_id400903 GD19889 [Drosophila simulans];Query=GD19889%20[Drosophila%20simulans] 286 293
# protein sequence = [MAVVCCGRWKWATCNNFVRPAIAASLLIAPPRRCHRVPGIGPSGPSGLMQASILWRVEKCAAVQRRLMETLRFESPVI
# VVQDDCPVVRYGVGKTMISWLDKIFRHPEGRICPQDNRRLILRKSNRLARCLGWTVFGGIFFRSAILKVHLLQLRLRPTLLGSLGFDFFTFAIILEVH
# LLQFILRPSLLGSLGFDFFTFAIILEVHLLQLILRPSLLGSLGFDFFTFAIILEENGGEVTDKAADGAFIKRRLFQAQIHQFGMRDGSPVMHSPSRQD
# SAIRLRSLYHPSQQGGEFN]
#
##gff-version	3
##query	GD15655%20[Drosophila%20simulans] 1 518
X	Scipio	protein_match	13969178	13969312	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 1 45
X	Scipio	protein_match	13952616	13952662	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 46 61
X	Scipio	protein_match	13934003	13934049	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 46 61
X	Scipio	protein_match	13924923	13924969	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 46 61
X	Scipio	protein_match	13895475	13895670	1.0	-	1	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 62 126
X	Scipio	protein_match	13895254	13895375	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 127 167
X	Scipio	protein_match	13894674	13894827	1.0	-	1	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 168 218
X	Scipio	protein_match	13893997	13894168	1.0	-	0	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 219 275
X	Scipio	protein_match	13893671	13893785	1.0	-	2	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 276 314
X	Scipio	protein_match	13889861	13890051	1.0	-	1	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 315 377
X	Scipio	protein_match	13886617	13887038	1.0	-	2	gene_id=kassiopeia_gene_id396948 GD15655 [Drosophila simulans];Query=GD15655%20[Drosophila%20simulans] 378 518
# protein sequence = [MTMWQSGGMGGHGSQNNPWMKLMGIVHKERRHTENVQSQSGSNERMAHITTTHGSLSQAPREDEGFIKEEERPLPDNE
# KQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLN
# FCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF
# IDLKTTYTAESSNDRELKQPQKIHIYNYLCLRLPQASTFIPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYLKKSETDQEEMQSQNFNHVTSCPY
# LPGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAVAPFLGAQQQQQQPVASSLSMSIDKQLQHPLQQLTQTQLYQQQQQQQQQNGFKQQ
# QQQTQQQLQQQQSHTINASAAAATSGSSSSGLTMRHNNALAVSIETDV]
#
##gff-version	3
##query	wings%20up%20[Drosophila%20simulans] 1 388
X	Scipio	protein_match	10351533	10351555	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 1 8
X	Scipio	protein_match	10350879	10350920	1.0	-	1	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 9 22
X	Scipio	protein_match	10348111	10348483	1.0	-	1	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 23 146
X	Scipio	protein_match	10347097	10347315	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 147 219
X	Scipio	protein_match	10346933	10347025	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 220 250
X	Scipio	protein_match	10346787	10346867	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 251 277
X	Scipio	protein_match	10346613	10346691	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 278 303
X	Scipio	protein_match	10346062	10346140	1.0	-	0	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 278 303
X	Scipio	protein_match	10345581	10345834	1.0	-	2	gene_id=kassiopeia_gene_id397157 wings up [Drosophila simulans];Query=wings%20up%20[Drosophila%20simulans] 304 388
# protein sequence = [MSDDEEYTSEEEEVVEETREETGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAE
# EEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKTKEQLEEEKKISLSFRIK
# PLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKL
# FEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEE
# EEEKEEEEEEEEEEEE]
#
##gff-version	3
##query	GD15948%20[Drosophila%20simulans] 1 516
X	Scipio	protein_match	9157726	9157894	1.0	-	0	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 1 56
X	Scipio	protein_match	9153753	9154015	1.0	-	2	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 57 144
X	Scipio	protein_match	9152483	9152551	1.0	-	0	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 145 167
X	Scipio	protein_match	9152044	9152193	1.0	-	0	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 168 217
X	Scipio	protein_match	9151788	9151964	1.0	-	0	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 218 276
X	Scipio	protein_match	9150863	9151271	1.0	-	0	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 277 412
X	Scipio	protein_match	9150574	9150753	1.0	-	2	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 413 472
X	Scipio	protein_match	9149951	9150139	1.0	-	2	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 413 475
X	Scipio	protein_match	9149532	9149726	1.0	-	2	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 413 477
X	Scipio	protein_match	9148749	9148879	1.0	-	2	gene_id=kassiopeia_gene_id397220 GD15948 [Drosophila simulans];Query=GD15948%20[Drosophila%20simulans] 473 516
# protein sequence = [MFCCNMLLDASVATSTSTSISTYPLQRATKRAMTPPNAMALIMLLLLALCAAGNGQICGPPAVPLNAKVRTITVDSQI
# AEAHYECDAGYELFGPSAVKCDRRTGWERDLPFCGVNVAYRKPVNQSSYTRSGPASYANDGKPGNKTCYDFHITKGEASTRRKPFASKLAMWCKSPPG
# ARTSRTTTMASRTAWSSMEVAIGCGTMWAAIWTICTSSASTLHCLAARRMPSKTPLSWAKSSLWARRSSTPAPRATRCSVRRNGSADSMALGVAPRRP
# ANIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQSELYCTRDGKWSGEAPVCELVTCETPSVPSGSFVIGY
# DYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYCEYIDCGTILPIPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPK
# CEENIYDQIPNEQFYDAPYEMRTNDEVYEPEPVASNVITINGISVR]
#
##gff-version	3
##query	GD16010%20[Drosophila%20simulans] 1 460
X	Scipio	protein_match	8356819	8356957	1.0	-	0	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 1 46
X	Scipio	protein_match	8354887	8355080	1.0	-	2	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 47 111
X	Scipio	protein_match	8354321	8354667	1.0	-	0	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 112 227
X	Scipio	protein_match	8353665	8354250	1.0	-	1	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 228 422
X	Scipio	protein_match	8352253	8352596	1.0	-	0	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 112 226
X	Scipio	protein_match	8351590	8352172	1.0	-	1	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 228 421
X	Scipio	protein_match	8350629	8350966	1.0	-	0	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 112 224
X	Scipio	protein_match	8350004	8350565	1.0	-	1	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 228 414
X	Scipio	protein_match	8349796	8349933	1.0	-	0	gene_id=kassiopeia_gene_id397279 GD16010 [Drosophila simulans];Query=GD16010%20[Drosophila%20simulans] 415 460
# protein sequence = [MQRLQFALLASLLLLVLLLPGIWSTPTDQEVDIVHYQPEQVHLAFGERTDSEIVVTWSTRSLPPDQEVGAVSVVEYGQ
# LVDGQVRLTQQARGTATKFVDGGHKQATQFIHRVTLRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNENAQSLARLQQETQG
# GMYDAIIHVGDFAYDMNTKNARVGDEFMRQIETVAAYLPYMVVPGNHEEKFNFSNYRARFNMPGETDSLWYSFNLGPVHFVSFSTEVYYFLSYGFKLL
# TKQFEWLERDLAEANLPENRAKRPWIITYGHRPMYCSDDKEYDCNSQLETYIRQGLPMLKWFGLEDLFYKHGVDVEIFAHEHFYTRMGPIYDYKVYNG
# SAEAPYTNPKAPIQIITGSAGCKEEREPFSNDLPKWNAYHSNDYGYTRLKAHNGTHLHFEQVSDDQNGAIVDSFWVINDKHGAYPSPQ]
#
##gff-version	3
##query	GD16042%20[Drosophila%20simulans] 1 414
X	Scipio	protein_match	7931693	7931756	1.0	-	0	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 1 21
X	Scipio	protein_match	7925579	7925645	1.0	-	0	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 1 22
X	Scipio	protein_match	7922708	7922844	1.0	-	2	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 22 67
X	Scipio	protein_match	7922163	7922642	1.0	-	0	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 68 227
X	Scipio	protein_match	7921944	7922073	1.0	-	0	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 228 270
X	Scipio	protein_match	7918833	7919263	1.0	-	2	gene_id=kassiopeia_gene_id397310 GD16042 [Drosophila simulans];Query=GD16042%20[Drosophila%20simulans] 271 414
# protein sequence = [MSSTSSSVLTLSSFNLLFFTQVLTVLSSTIKYNEYATDKGGNVSIPCIAQGNIMWVKEHGNNSTIVQTGRVLVLRNVS
# TTDAGIYVCFASVPRPSTTATSATTSPQNQQEKETRPLEDEDGGQGESVSPKDDQPKEAEMEEEVEYLAHQRTKLIVRTVPGPVSQLYFKASTILGFL
# IWRFNKTQSGGYPVRSFTAEYRNVSYKTPPANASFEHAWSRMDPINIAFNVRQMEVYRLAPNTTYEFRIWANNELGSGEVVTTNVTTLPETKEEELQD
# GWDSIELIPNIILNPGFSESDGGPEPGGQGHVGGAGDQDAGEDDDDDVAMPFPRTIIFGQHHRTPPPPRLHLPPQHHRHQNQSHHHQYHHQQRQQQHH
# HHHLRRQDDDDDDDYEEEHEPTMERFKRKVSVFFTGPTIKRI]
#
##gff-version	3
##query	GD16072%20[Drosophila%20simulans] 1 954
X	Scipio	protein_match	7314946	7315032	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 1 29
X	Scipio	protein_match	7314661	7314851	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 30 93
X	Scipio	protein_match	7314388	7314594	1.0	-	1	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 94 162
X	Scipio	protein_match	7314164	7314304	1.0	-	1	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 163 209
X	Scipio	protein_match	7314003	7314099	1.0	-	1	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 210 241
X	Scipio	protein_match	7313480	7313931	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 242 392
X	Scipio	protein_match	7312028	7312751	1.0	-	1	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 393 633
X	Scipio	protein_match	7311933	7311990	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 634 652
X	Scipio	protein_match	7308515	7308575	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 634 653
X	Scipio	protein_match	7308257	7308317	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 634 653
X	Scipio	protein_match	7291957	7292342	1.0	-	2	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 653 781
X	Scipio	protein_match	7290615	7290794	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 782 841
X	Scipio	protein_match	7290206	7290544	1.0	-	0	gene_id=kassiopeia_gene_id397338 GD16072 [Drosophila simulans];Query=GD16072%20[Drosophila%20simulans] 842 954
# protein sequence = [MANYQAAHAQERRIQELDQTVESIFDVRKRMGKGAYGIVWKATDRRTKNTVALKKVFDAFRDETDAQRTYREVIFLRA
# FRCHPNIVRLLDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLINAIKFIHSGNVIHRDLKPSNILIDSKCRLKVADFGLARTLSS
# RRIYDDLEQDGMLTDYVATRWYRAPEILVASRNYTKGIDMWGLGCILGEMIRQKPLFQGTSTVNQIEKIVTSLPNVTKLDIASIGPSFGSVLLSRNIQ
# RDRRYSLDEMMKNCCDDGISLVKALLVLNPHNRLTAKAAIRHPYVSRFQYASAEMDFHMDIVPPLKDHMRYDVDQYRNSLYELIDRETSGSARTVSNS
# TSSSNRDELAKPVRVTKQTRTISAKQSTTSPVERKKEPSSVEVTQSRRNIKLLGSAHKAKSTEINRTESAVTQAYIASTPAAAAPPAAAAASAATAPG
# AGRKSGEKSVHKCRHNNAAIQRELAAVAAAAAVVRRKKSTWQPQAKSQGKFHTEAKAHAQNTIQTHKDNMKDSPPRMMQKSQSQMDAKEPIPQHRYSN
# KLCQEKKSKEKHHMLCITRDTFPSDAKHRQHMEILQREERRQMKRELELKDNQRRRKEAENDPLKIKRKVCEHTEKKADESLSKVCEILSTAGASAVI
# DLTYSHWEEGYNLVRTLGIGYVRLERIMRPFLDMFGDFMRQKRANNVAMVFMNARDAGEAMQQMLIGYPFRTLIMDASQTDPGQHFLERIRSLRPAPT
# YIAIFARAAAMNGIFEKVQKAGLFQRPLEWHFVFLDTRDRVFKYRRQAELCTRFTLSPRAICRSMPMPDLYCGSGFTMQRAMLLNVLRSLINAAQVSP
# GYPTAIYQDCNATASSSEVGDPLEKDDYNWLDMVHWSNFLAYATPSPQIQGQFQRPVPGLTFAVNISAGYYSSEHEAKTDLAAWSSVGESGS]
#
##gff-version	3
##query	GD16087%20[Drosophila%20simulans] 1 125
X	Scipio	protein_match	7159975	7160016	1.0	-	0	gene_id=kassiopeia_gene_id397351 GD16087 [Drosophila simulans];Query=GD16087%20[Drosophila%20simulans] 1 14
X	Scipio	protein_match	7154812	7154935	1.0	-	0	gene_id=kassiopeia_gene_id397351 GD16087 [Drosophila simulans];Query=GD16087%20[Drosophila%20simulans] 15 55
X	Scipio	protein_match	7153185	7153302	1.0	-	0	gene_id=kassiopeia_gene_id397351 GD16087 [Drosophila simulans];Query=GD16087%20[Drosophila%20simulans] 15 53
X	Scipio	protein_match	7152898	7153112	1.0	-	2	gene_id=kassiopeia_gene_id397351 GD16087 [Drosophila simulans];Query=GD16087%20[Drosophila%20simulans] 54 125
# protein sequence = [MEFNNRLLLKIIELAIAIACIVLYETVGNLSLHPVIVAGTVGGYTVICGVLLIGHVLNSLVEKRLNALFSLIGCLLFV
# ASGALVIDEWHGGLLNTDRKRQAIGAGSLMIINAAVFLLDTLCICRT]
#
##gff-version	3
##query	sws%20[Drosophila%20simulans] 1 1136
X	Scipio	protein_match	6296530	6296631	1.0	-	0	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 1 34
X	Scipio	protein_match	6293479	6294210	1.0	-	0	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 35 278
X	Scipio	protein_match	6292482	6293410	1.0	-	0	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 279 588
X	Scipio	protein_match	6291848	6292419	1.0	-	1	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 589 778
X	Scipio	protein_match	6289359	6289475	1.0	-	2	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 779 817
X	Scipio	protein_match	6288359	6288475	1.0	-	2	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 779 817
X	Scipio	protein_match	6287673	6287884	1.0	-	2	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 818 888
X	Scipio	protein_match	6287274	6287618	1.0	-	0	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 889 1003
X	Scipio	protein_match	6286812	6287210	1.0	-	0	gene_id=kassiopeia_gene_id397401 sws [Drosophila simulans];Query=sws%20[Drosophila%20simulans] 1004 1136
# protein sequence = [MDVLEMLRASASGSYNTIFSDAWCQYVSKQITATVYMYCALVMMSLLFIAWFLYFKRMTRLRLRDELARSISTATNSS
# GDLRGLRFRKRDKMLFYGRRMLRKVKNVSGQMYSSGKGYKRRAVMRFARRILQLRRDNMPLEMRTVEPPAEYLEETIEGSDRVPPDALYMLQSIRIFG
# HFEKPVFLRLCKHTQLLELMAGDYLFKITDPDDSVYIVQSGMINVYISNADGSTLSLKTVRKGESVTSLLSFIDVLSGNPSYYKTVTAKAIEKSVVIR
# LPMQAFEEVFQDNPDVMIRVIQVIMIRLQRVLFTALRNYLGLNAELVQNHMRYKSVSTMSGPINSQTSQSSRQAPNGPPMVINQMNLMQSAASGTGSG
# VSVTVTRPPPSPSRHSREEHTLSDPNPNPDGSFHGTTNLFTEVHGDAPNADLFHQQQQPSVGNLSTRRSSITLMAPDGSHSCPQTPGVTTSIDMRLVQ
# SSAVDSLRKELGLSEEDSHIIEPFVELRELEPNVTLITEGNADDVCVWFVMTGTLAVYQSNQDATRAKQDKSDMLIHFVHPGEIVGGLAMLTGEASAY
# TIRSRSNTRIAFIRRAAIYQIMRQRPRIVLDLGNGVVRRLSPLVRQCDYALDWIFLESGRAVYRQDESSDSTYIVLSGRMRSVITHPGGKKEIVGEYG
# KGDLVGIVEMITETSRTTTVMAVRDSELAKLPEGLFNAIKLRYPIVVTKLISFLSHRFLGSMQTRSGSGAPGAPVEANPVTHKYSTVALVPITDEVPL
# TPFTYELYHSLCAIGSLWRYVRSSMSLSGYMPPLCDPKDGHLLLDGGYVNNLPADVMHNLGAAHIIAIDVGSQDDTDLTNYGDDLSGWWLLYKKWNPF
# TSPVKVPDLPDIQSRLAYVSCVRQLEEVKNSDYCEYIRPPIDKYKTLAFGSFDEIRDVGYVFGKNYFENMAKAGRLGRFNQWFNKEPPKRVNHASLNE
# YTFIDLAQIVCRLPETYAVNTAELFSEDEDCDGYISEPTTLNTDRRRIQVSRAGNSLSFSETEMDSDVELDLKLERKMDKSTQSSPPTSSRTDMRGKE
# EAKHMANWHWGVKHKDETGSGATVATHTQTGQEQELQQQQQQQQKLQQDQGARAEQLVDMDKEEDKENRSSPNNETKN]
#
##gff-version	3
##query	GD16152%20[Drosophila%20simulans] 1 935
X	Scipio	protein_match	5931628	5931760	1.0	-	0	gene_id=kassiopeia_gene_id397414 GD16152 [Drosophila simulans];Query=GD16152%20[Drosophila%20simulans] 1 44
X	Scipio	protein_match	5931275	5931407	1.0	-	0	gene_id=kassiopeia_gene_id397414 GD16152 [Drosophila simulans];Query=GD16152%20[Drosophila%20simulans] 1 44
X	Scipio	protein_match	5928543	5931214	1.0	-	2	gene_id=kassiopeia_gene_id397414 GD16152 [Drosophila simulans];Query=GD16152%20[Drosophila%20simulans] 45 935
# protein sequence = [MEYIEKFRANNIRDENKAEGVSDTGQDIYTDATDSIERVSEDEEGVNESQITVIPNSEYRNDTSFLESEMAKSFKTHR
# KCKKKDTNVYRPTTPMTRPSTPIDDDVPSTSAQAKFYQQFKDPLDPEKSESSVLNMWQLLTEKGKSRKDTTTQPNVLEDWQSDIVLFIKEFNREKRRQ
# QQAQKYSIYGKLQPLDPKSVMKPKKKSVSINRPNKCSKFCSEYNTKKEWFKAARKFKRDQYLSFYGPEPRKKLTEEVQCNITRRLFNVIGNQTKPVQP
# KPMPKKNIPHRPVEKKKVPKQVPKKDTTSLDRGEWLKNLLIDRVRLSRQKHNMDHLIPPENPLKAIYLPILRQVEPLKIYQKKPKPLNKKPTSFGLKI
# SSSTYMTPEPGSQASLASIFYDAKNTMSRTPSSTALRDDLVDETESVFSCQEPSDPHIFSSLSKIEEIQPLQKKIDKSTTEDIPEEIVDFRRFIDIDC
# VSLLILDLMSNMKPKKDIHLFEFNPKITNYMDYFYWKHLKDDCLFFHWFVSEGFFPAHYLINVKNSKELENVSDEQIDVEIMQYIDVANDACKKEIQL
# TSQMAHLMVTSYFRVLHHRATSVEYPIQDRYLLRCRSAISVVELYQQERGRNILKDRVDCKRLMNWAIKHEGRVKQLIDEPLYYAEQRASIDSSLVIR
# TPNLECFKDFYTRHVLPKPDALAINSMFNKMRYPRNRTYPHMSFVCPIPGCETILCSEILMAHFLSDHCRRLEELWLTDRMILLFYPCSYPTNQIYCI
# CVIALLAKIPGQTVPVPRVVFNEELPTKYLYFAEHGACFLMFAPVSRLLVEGKATPKPSAEIGVEKHQLDTLYIFWLAIADYELEVAGCRLLVYGRNH
# NVKARSLLTFVKMSTFKGVHDLLVTHPDSYLAIDYETMATVTNNFKDLIFIEVRYINKLNEDPNSSGDDNYDD]
#
##gff-version	3
##query	fasciclin%202%20[Drosophila%20simulans] 1 840
X	Scipio	protein_match	3060767	3060836	1.0	-	0	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 1 23
X	Scipio	protein_match	3047507	3047570	1.0	-	0	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 1 21
X	Scipio	protein_match	3021807	3021978	1.0	-	2	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 24 81
X	Scipio	protein_match	3016822	3016985	1.0	-	1	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 82 135
X	Scipio	protein_match	3010808	3010932	1.0	-	2	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 136 177
X	Scipio	protein_match	3010388	3010729	1.0	-	0	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 178 291
X	Scipio	protein_match	3009240	3010292	1.0	-	0	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 292 642
X	Scipio	protein_match	3008937	3009120	1.0	-	0	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 643 703
X	Scipio	protein_match	3003751	3003952	1.0	-	2	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 704 771
X	Scipio	protein_match	3002574	3002660	1.0	-	1	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 772 800
X	Scipio	protein_match	3001960	3002080	1.0	-	1	gene_id=kassiopeia_gene_id397563 fasciclin 2 [Drosophila simulans];Query=fasciclin%202%20[Drosophila%20simulans] 801 840
# protein sequence = [MGELPTNSVGVFLALLLCSCSLIELTRAQSPILEIYPKQEVQRKPVGKPLILTCRPTVPEPSLVADLQWKDNRNNTIL
# PKPNGRNQAPMYTETLPGENLALMITSLSVEMGGKYYCTASYANTEILEKGVTIKTYVAITWTNAPENQYPTLGQDYVVMCEVKADPNPTIDWLRNGD
# PIRTTNDKYVVQTNGLLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIVSLPTNLEAVEGKPFAANCTARGKPVPEISWIRDATQLNVAT
# ADRFQVNPQTGLVTISSIYELYNVTGARTKEIAITCRAKGRPAPAITFRRWGTQEEYTNGQQDDDPRIILEPNFDEERGESTGTLRIANAERSDDGLY
# QCIARNKGADAYKTGHITVEFAPDFSHMKELPPVFSWEQRKANLSCLAMGIPNATIEWHWNGRKIKDLYDTNLKIVGTGPRSDLIVHPVTRQYYSGYK
# CIATNIHGTAEHDMQLKEARVPDFVSEAKPSQLTATTMTFDIRGPSTELGLPILAYSVQYKEALNPDWSTAYNRSWSPDSPYIVEGLRPQTEYSFRFA
# ARNQVGLGNWGVNQQQSTPRRSAPEEPKPLHNPVQHDKEEPVVVSPYSDHFELRWGVPADNGEPIDRYQIKYCPGVKISGTWTELENSCNTVEVMETT
# SFEMTQLVGNTYYRIELKAHNAIGYSSPASIIMKTTRGIDVIQVAERQVFSSAAIVGIALGGVLLLLFVVDLLCCITVHMGVMATMCRKAKRSPSEID
# DEAKLGSGQLVKEPPPSPLPLPPPVKLGGSPMSTPLDEKEPLRTPTGSIKQNSTIEFDGRFVHSRSGEIIGKNSAV]
#
##gff-version	3
##query	notch%20[Drosophila%20simulans] 1 811
X	Scipio	protein_match	2153912	2154002	1.0	+	0	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 1 30
X	Scipio	protein_match	2160442	2160532	1.0	+	0	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 1 30
X	Scipio	protein_match	2166837	2168089	1.0	+	2	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 31 448
X	Scipio	protein_match	2168155	2168464	1.0	+	0	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 449 551
X	Scipio	protein_match	2168540	2168974	1.0	+	2	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 552 696
X	Scipio	protein_match	2169054	2169397	1.0	+	2	gene_id=kassiopeia_gene_id397862 notch [Drosophila simulans];Query=notch%20[Drosophila%20simulans] 697 811
# protein sequence = [MHAVASLPASLPLLLLTLAFANLPNTVRGTGLDTGEDIENNEDSTAQVISDLLAQGAELNATMDKTGETSLHLAARFA
# RADAAKRLLDAGADANCQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAA
# VNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHVPRSPQMLSMTPQAMIGSP
# PPGQQQPQLITQPTVISAGNGGNNGNGNASGKQSSQTAKQKAAKKAKLIEGSPDNGLDATGSLRRKASSKKTSAASKKAANLNGLNPGQLTGVSGVPG
# VPPSNSAAQAAAAAAAAVAAMSHELEGSPVGVGMGGNLPSPYDTSSMYSNAMAAPLANGNPNTGAKQPPSYEDCIKNAQSMQSLQGNGLDMIKLENYG
# YSMGSPFQQELLNGQGLGMNGNGQRNGVGPGVLPGGLCGMGGLTGAGNGNSHEQGLSPPYSNQSPPHSVQSSLALSPHAYLGSPSPAKSRPSLPTSPT
# HIQAMRHATQQKQFGGSNLNSLLGGANGGGVVGGGGGGAGGQGPQNSPVSLGIISPTGSDMGIMLAPPQSSKNSAIMQTISPQQQQQQQQQQQHQQQQ
# QQQQQQQQQQLGGLEFGSAGLDLNGFCGSPDSFHSGQMNPPSIQSSMSGSSPSTNMLSPSSQHNQQAFYQYLTPPSQHSGGHTPQHLVQTLDSYPTPS
# PESPGHWSSSSPRSNSDWSEGVQSPAANNLYISGGHQANKGSEAIYI]
#
##gff-version	3
##query	GD16804%20[Drosophila%20simulans] 1 2502
X	Scipio	protein_match	5063289	5063652	1.0	+	0	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 1 121
X	Scipio	protein_match	5064233	5065469	1.0	+	2	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 122 534
X	Scipio	protein_match	5065532	5067749	1.0	+	1	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 535 1273
X	Scipio	protein_match	5068829	5070983	1.0	+	0	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 1274 1991
X	Scipio	protein_match	5071061	5071594	1.0	+	2	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 1992 2169
X	Scipio	protein_match	5071659	5071798	1.0	+	2	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2170 2216
X	Scipio	protein_match	5077697	5077864	1.0	+	0	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2217 2272
X	Scipio	protein_match	5077932	5078007	1.0	+	0	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2273 2297
X	Scipio	protein_match	5086262	5086351	1.0	+	2	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2298 2327
X	Scipio	protein_match	5086414	5086516	1.0	+	2	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2328 2362
X	Scipio	protein_match	5087492	5087603	1.0	+	1	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2363 2399
X	Scipio	protein_match	5088416	5088563	1.0	+	1	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2363 2411
X	Scipio	protein_match	5089510	5089661	1.0	+	0	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2412 2462
X	Scipio	protein_match	5089747	5089867	1.0	+	1	gene_id=kassiopeia_gene_id398028 GD16804 [Drosophila simulans];Query=GD16804%20[Drosophila%20simulans] 2463 2502
# protein sequence = [MNVYPSDNKLSQYTYTTTKPGDIFSLPPTTPPTINNEPTLTTTRNTTTTTTTTTTSDNLQNHPKQSAIEPATDTDSQP
# IRKVKLSANEAKVVEEAPCVRRQYYQLGNEGENPETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETTFEGRRVSHPEDREISID
# ELILIEETIPSVPSPRAQSPGKPATRSHSPEKPQPRATPRQSPEKEQPAFKQPHEVYTPSQPEKQFPRTQSPEKTPGWTQPQVSPRQSPEKQLPRAQS
# PEKGPAVRQPSVSPRQSPEKQVPDPQTRDQGPGLPRISPRQSPEKQLPKDIPQKTRQSPEKDLTSQQRREEEIFRSTITTTQKRTTNNLNEEFITNER
# DYQNQPLSEKKPQVPANAEPNTKPSETIESPDGGFPSKSTEVEAQPEVKESPTYRKKGLTRRETFEDRCRQILGMEEDGDTQGTYTDRPDNEQEDVNV
# SNTTIETIQVKIEDCPDDDEDDKPRRVTETYVVRTQPKIKVEEELFVDVTEAEDVEILVSPSKKKDQGIPSIPKKEQSPVHSKKEETPRYPQEQDRYP
# KEPETSQFPKESPRNPKEDAETININEETTIVITKQGSKSPSPRWSPSPERRVPKNQQSPSPTASPSVSPVSVKKIPNEVESNFVTEKIIDCRGKTVV
# EKISQRPRTPSPTTPKKYTKPSQKIPERVPETESEPEKDSESETKKKTSVSVTKTETERRNSRTTKTKQPLPLKEPQSKVPAAKSPRKDSLTGRKRDS
# LVEETRTTTTTTTTRQGRKPSDTNGSPSIKDRLRSSPRKQKTSPQQTRTPTPAQTRNPEDDVDGDSSSPDASPTRVGNERRRSSNISVHTEIIIDHLA
# PKSPKTERRPQGGTGNVPSPIRKLPVTERKESAPVPRVTRRDKTEKVTRSTSENIIKMSGTKPHPEMSSLKPGGDRSRPSKCCTTKTINLSEQRINTA
# TDIEGVIIDIQQAKSSREPSPDRIVPTPVPAELETGKPRYPDVVQEPDDEPRRKPQVTNIPIFEEESQTYVGCQISELHSSNGIEVDILDNPTVEAPK
# SLDYPVNTPDTDESLLSVHEKVSRFTHSAEKVKEPKVSAPFSREFDVNAKIPENDDCLLSINQKVDKFLRTAENVTRPSSLSSRPEIERPGLEEIDEE
# LLRDDCTLSVSQKVHKFIDTAEKLAPTMPQKSPRLVANIERHISRQSEPERELDEESEPELDRDTDVEDDDQTSQLETEEEITQTVTKKETLKEFKQQ
# TKETRETRRDPKAEPEKLQKKSPQTKIKEESARVPKYQAKVSQKVSQWEPKKQPQREPKVTQKETPWEAKKQPLSKLKDEPEKVNKREPKVPQKESQA
# KLKEEPERVTKKAPQKEPRKEPLRQSEEEPEFSPEEEFDEEPLPMTKTHTTAIEMKRQKDILSRPSVFGQRTPERKSSTTPSPTKLNGTRCRPSPSTN
# LITEEKRSYRNQVTNVSKPGTRKTTPSAYSPAQSPPPKATSISKRMEQISQQSWVVQDVDVDVEVVGPAPPSHISEKPQGKSPSPTSSRSPSRSPSRS
# PSRRTSTNLNTTSTTTTTTTEHPSTTKTTTPKPTPTNPSKDEPEITPIESLTEKSITTTYTTNTTGRNVASRRNVFEPVHEAQVDSEPTGRRPSYMDH
# TKSSLEHIRRDSLEINKSHYSRKSSMEDDSPVEPRNPNSSVKFDVPRKTSARGADEPRKTSLKGKDEDSDLELEIEDIFDLQRLEKLLETVASYEMRR
# RIRAQMRLIRKNMINAGTTTTITTITTSTAPGKSSPLPKRRDQSPAGAAEVKTKEVRTTTSRRQQQQRVEQVDSTTPTAPGKTSPHGKPPVKPRERSA
# SPAQKRRISPQGKQAPGDRSTTTTTKVTTTSTTRGAPNKPAQGPIWADRSKVLKGHPTVPQTNGSTPRKGSTSSTTSSSGKITRTMTSSSTTTSSSST
# TNTRNKQREEDSITSSYGVGPTDENGLPLFGIRALKKKATPPAEEPCETKQEVTGYVIEEQFYSDNKSPPRHERKELIYSSNADELAAIKQQLQDEDD
# SSPPLLDARVVREFKKVESQQSLPEDARYVRRGSVKELSEKFIRKESSSSTHSTHSSIAQSLVRHEDETEDDSESNEVCSVIEAPQMRQNQSHTTSTT
# RSSNTRSFLNSSADQRQVTSVDDVLERMRNADNVEEPGDSSEDREARALLNKFLGASVIMQGVESMLPPTATGQRLNSQGVKTTRITNTYSKSGNSTS
# TTNNTSNTTNKVSSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYEERRKIRARLRELMAEREAQHKSSSSSEQRTETKSKDGGATVTTTTTKVTTRT
# VSGSAASKNISPLAKFKQLDKQAAAQQAQKSSPTTSTPTTPGGSAQPLFKFTDPALNARAATVKDQLLQWCKHKTQEYENVQINNFSSSWSDGLAFCA
# LIHHFLPDAFDYTTLTKQTRRHNFELAFSVADEKAGIAPLLDVEDMVEMSRPDWKCVFVYVQSIYRRFRNCQ]
#
##gff-version	3
##query	GD16875%20[Drosophila%20simulans] 1 838
X	Scipio	protein_match	6355350	6355827	1.0	+	0	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 1 159
X	Scipio	protein_match	6355899	6356127	1.0	+	2	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 160 236
X	Scipio	protein_match	6356752	6356836	1.0	+	1	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 237 264
X	Scipio	protein_match	6357425	6357509	1.0	+	1	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 237 264
X	Scipio	protein_match	6358311	6358745	1.0	+	0	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 265 409
X	Scipio	protein_match	6358807	6360030	1.0	+	0	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 410 817
X	Scipio	protein_match	6360107	6360169	1.0	+	0	gene_id=kassiopeia_gene_id398098 GD16875 [Drosophila simulans];Query=GD16875%20[Drosophila%20simulans] 818 838
# protein sequence = [MILERNRRSQLALLTIAMLAAIAGQTDAQKAAKLTAVSTCASKEKCHTCIQTEGCAWCMQPDFKGQSRCYQNTSSLCP
# EEFAYSPITLEEILVNNKLTNQYKAELAAGGSGIGVGIGAGISGGSSMSSSGFSSSSGYEEYSAGEIVQIQPQSMRLALRVNEKHNIKISYSQAEGYP
# VDLYYLMDLSKSMEDDKAKLSTLGDKLSETMKRITNNFHLGFGSFVDKVLMPYVSTIPKKLQHPCENCKAPYGYQNHMPLNNNTESFSNEVKNATVSG
# NLDAPEGGFDAIMQAIACRSQIGWREQARRLLVFSTDAGFHYAGDGKLGGVIAPNDGECHLGPTGLYTHSELQDYPSISQINQKVKDNAINIIFAVTA
# SQLSVYEKLVEHIQGSSAAKLDNDSSNVVELVKEEYRKISSSVEMKDNATGDVKITYFSSCLSNGPELQTSKCDNLKEGQQVSFTAQIQLLKCPEDPR
# DWTQTIHISPVGINEVMQIQLTMLCSCPCEKPGSIGYQVHANSCSSHGTSMCGICNCDDSYFGNKCECSATDLTSKFANDTSCRADSTSTTDCSGRGN
# CVCGACECHKRPNPIEIISGKHCECDNFSCERNRNQLCSGPDHGTCECGRCKCKPGWTGANCGCQESNDTCMPPGGGEVCSGHGSCECGVCKCTVNDQ
# GRFSGRHCEKCPTCSGRCQELKDCVQCQMYKTGELKNGDDCARNCTLFVPVGVEKVEIDETKDEQMCTFFDEDDCKFMFKYSEQGELHVYAQENKECP
# PKVFMLGIVMGVIVAIVLVGLAILLLWKLLTTIHDRREFARFEKERMNAKWDTGENPIYKQATSTFKNPMYAGK]
#
##gff-version	3
##query	GD16965%20[Drosophila%20simulans] 1 310
X	Scipio	protein_match	7736669	7736726	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 1 19
X	Scipio	protein_match	7748936	7748984	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 1 16
X	Scipio	protein_match	7758050	7758186	1.0	+	2	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 20 65
X	Scipio	protein_match	7758285	7758497	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 66 136
X	Scipio	protein_match	7765021	7765116	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 137 168
X	Scipio	protein_match	7765227	7765448	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 169 242
X	Scipio	protein_match	7767703	7767886	1.0	+	0	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 243 303
X	Scipio	protein_match	7768033	7768052	1.0	+	2	gene_id=kassiopeia_gene_id398175 GD16965 [Drosophila simulans];Query=GD16965%20[Drosophila%20simulans] 304 310
# protein sequence = [MELLQALCCTLLLLLARMQGPAFWGLINPEWSLCNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHSVI
# FTAGNDTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTFPAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAE
# LRMLTDQLERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLNKPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHR
# PIRTNIDFKTTKSNGKAACPTMYREVYYKATSWKQN]
#
##gff-version	3
##query	GD17126%20[Drosophila%20simulans] 1 288
X	Scipio	protein_match	10191387	10191504	1.0	+	0	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 1 39
X	Scipio	protein_match	10191935	10191980	1.0	+	2	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 40 55
X	Scipio	protein_match	10192734	10192779	1.0	+	2	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 40 55
X	Scipio	protein_match	10193171	10193277	1.0	+	1	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 56 90
X	Scipio	protein_match	10194629	10194915	1.0	+	2	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 91 186
X	Scipio	protein_match	10194990	10195125	1.0	+	0	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 187 231
X	Scipio	protein_match	10195192	10195361	1.0	+	2	gene_id=kassiopeia_gene_id398328 GD17126 [Drosophila simulans];Query=GD17126%20[Drosophila%20simulans] 232 288
# protein sequence = [MSQPLKFYFDFLNQSSRALYILLEASKIPFEAIPISMLKDKIKRNPESNVRIPPNPIWYALQMVIYEWAYRFAKQSVV
# FKLSSQRSYKVIGEHLTGEFRDNVNRFRKLPAITDHGYQLSENVAIFRHLAREKLVPEHWYPRRHLGRSRIDEYLAWQQTNMGVATTEYFQQKWLVPY
# LQKTRPADNAVNLASKQLEHTLNEFEQLFLNSRKFMMGDNISYADLSAICEIDQPKSIGYNAFQNRNKLARWYETVREELGPHYKEVLGEFEAKLKGS
# GSGQQQGVAQAVKQ]
#
##gff-version	3
##query	GD17262%20[Drosophila%20simulans] 1 204
X	Scipio	protein_match	12302694	12303224	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 1 177
X	Scipio	protein_match	12306422	12306505	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 178 205
X	Scipio	protein_match	12306731	12306811	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 178 204
X	Scipio	protein_match	12307037	12307090	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 178 195
X	Scipio	protein_match	12307316	12307396	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 178 204
X	Scipio	protein_match	12310313	12310393	1.0	+	0	gene_id=kassiopeia_gene_id398455 GD17262 [Drosophila simulans];Query=GD17262%20[Drosophila%20simulans] 178 204
# protein sequence = [MGKKTKVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLF
# PIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFK
# KFQVQKSIQFKKRHQNFQKLYLNLQEEK]
#
##gff-version	3
##query	GD17273%20[Drosophila%20simulans] 1 1012
X	Scipio	protein_match	12493878	12493892	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 1 5
X	Scipio	protein_match	12494763	12494886	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 6 46
X	Scipio	protein_match	12494951	12495942	1.0	+	2	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 47 377
X	Scipio	protein_match	12496087	12496277	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 378 441
X	Scipio	protein_match	12496339	12496534	1.0	+	1	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 442 506
X	Scipio	protein_match	12496603	12496788	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 507 568
X	Scipio	protein_match	12496857	12496905	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 569 584
X	Scipio	protein_match	12497289	12497394	1.0	+	2	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 585 620
X	Scipio	protein_match	12497488	12497599	1.0	+	1	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 621 657
X	Scipio	protein_match	12497732	12497774	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 658 671
X	Scipio	protein_match	12497884	12497938	1.0	+	0	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 658 675
X	Scipio	protein_match	12498002	12498593	1.0	+	2	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 676 873
X	Scipio	protein_match	12499255	12499457	1.0	+	1	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 874 940
X	Scipio	protein_match	12499920	12500134	1.0	+	2	gene_id=kassiopeia_gene_id398465 GD17273 [Drosophila simulans];Query=GD17273%20[Drosophila%20simulans] 941 1012
# protein sequence = [MDFMVPIHTMSDGSPPPSICFIRAAESYPKSQMEKEDSQLFVPFQELAGESIKYLGRTDDGILALSNYRIFLSKQSTG
# YETYVPLGLIESVQVRDLFQLIVNCKDASTVRCSFPSAEQCSDWQRRIHLMIGVPESLETLFAFPFYSWTCDVLGSGNGSGIVSAQANGNGLIAKDRC
# LTLHNGSAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFKNEVARLGFDLKGSWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFR
# GSRRLPAVVWRHQKSGAILARCSQPEVGWLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQSGLSGKSSPSLDDSSHEELT
# LDEIKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHAIRKSFHAVRQLCASSPDDPNWYGQLEKTMWMQHLSGLLGATMTVVHTIE
# KNGRPVLVHCSDGWDRTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKFADRSGNGPNSDEVNERCPVFLQWLDLVHQIHRQYPCSFEFSISYL
# IKLAQHSLSCLFGTFLCLMAKTRSSEDLTTNELGQSTISRRSSDPNLTVESINSMFDIRSEANNSVSENVQESVKDSKEVELDVTDATEKLNPESGRP
# FFIFGSSENDQSPVPSKSEDTSDICRALWHGAIETSTDTLIPAEPVQKPNSDNSSRDHITPPTMELVSGDRKLESTTTTTVQASKISQSYNNLPKVHI
# RPNAVICPQRVDAFPHHLDLQVPRETTGNPDRCKPEKLAKDANANANANGSLLTSDGCNGEESLFISPDLQRFVGQSPFDAPSAGGRIRRNTFGSSYS
# RDMKFTAENGRKMDRISLKMLQHVPGRPSKNVAVPPRMPLPRSKRKKRPVSSGYQTMLFRVALVVKLSSGLDEENIIVDLVEKFFVLTARSFGRRCQT
# KSFLTQLGYVDPATRASQPMSRSTLRYLQNPRRRTMRRLRRIPKRFSFSQFI]
#
##gff-version	3
##query	GD17480%20[Drosophila%20simulans] 1 429
X	Scipio	protein_match	15421858	15421860	1.0	+	0	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 1 1
X	Scipio	protein_match	15422325	15422499	1.0	+	0	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 2 59
X	Scipio	protein_match	15422772	15423010	1.0	+	2	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 60 139
X	Scipio	protein_match	15423128	15423209	1.0	+	0	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 140 166
X	Scipio	protein_match	15427280	15427355	1.0	+	0	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 140 164
X	Scipio	protein_match	15441222	15441428	1.0	+	2	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 167 235
X	Scipio	protein_match	15441721	15441924	1.0	+	2	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 236 303
X	Scipio	protein_match	15441995	15442371	1.0	+	2	gene_id=kassiopeia_gene_id398661 GD17480 [Drosophila simulans];Query=GD17480%20[Drosophila%20simulans] 304 429
# protein sequence = [MQQLLVVALVAVAIASLPQLAAGKKLGKRCVNCTYRTYYTYGDGRSLQRVVYRDPVYTRAQSYGSGCSGSPCGVNAVC
# QEASGGRPVCSCPPGFSGNPLTHCNRGECLDNVDCRGNLQCKDNRCVNPCVGACGIGSNCDARNHVAVCSCPAGYNGDPYHACHLNDPAAVSAANFEC
# PKPNGQFADEVQCDKFYVCDDGVAKAKLCPDGLVFDPLNRKFNKCDQPFNVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETK
# CTVGLHFDEYSGTCVWPDTAKREGCNPEQRTSETGFVCPKDQPKTDDRGQVVTHPQVPASHRLPEALRVTERRGSQGSGLPAGRGLQRCHRDVRCSRE
# CARLRGLVQGCGRQEGLSHFRSLLLLLIASTLTLMHTHKHTERNYQSNQIETHRFAS]
#
##gff-version	3
##query	GD17494%20[Drosophila%20simulans] 1 76
X	Scipio	protein_match	15623828	15623911	1.0	+	0	gene_id=kassiopeia_gene_id398674 GD17494 [Drosophila simulans];Query=GD17494%20[Drosophila%20simulans] 1 28
X	Scipio	protein_match	15624404	15624529	1.0	+	0	gene_id=kassiopeia_gene_id398674 GD17494 [Drosophila simulans];Query=GD17494%20[Drosophila%20simulans] 29 70
X	Scipio	protein_match	15625088	15625231	1.0	+	0	gene_id=kassiopeia_gene_id398674 GD17494 [Drosophila simulans];Query=GD17494%20[Drosophila%20simulans] 29 76
# protein sequence = [MSENSSAEARPFGNDELTEDPELPSEPKSNGTPQSSETSFSITEASSSITVDPENIDANTYMGFVLAYFQIINALW]
#
##gff-version	3
##query	GD17534%20[Drosophila%20simulans] 1 319
X	Scipio	protein_match	16384692	16385153	1.0	+	0	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 1 154
X	Scipio	protein_match	16387956	16388077	1.0	+	0	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 155 195
X	Scipio	protein_match	16388364	16388449	1.0	+	0	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 155 183
X	Scipio	protein_match	16388999	16389085	1.0	+	1	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 196 224
X	Scipio	protein_match	16389226	16389407	1.0	+	1	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 225 284
X	Scipio	protein_match	16390038	16390073	1.0	+	2	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 285 296
X	Scipio	protein_match	16390502	16390569	1.0	+	2	gene_id=kassiopeia_gene_id398714 GD17534 [Drosophila simulans];Query=GD17534%20[Drosophila%20simulans] 297 319
# protein sequence = [MALLRSLSAQRTAISLVYGRNSNKSSNSVAVAACRSFHQRGSRSTSIAGEGAASESTRGVNGARFLHSGERPLQASTL
# VQPELVSSETLKRSMKQESSQEKNPSPAGSPQRDPLDVSFNDPIAAFKSKTTGELIRAYLVYMICSSEKLVEHNMTLMKWSKNVLGQRLFTALMKATF
# YGHFVAGEDQIKIIPTLERLRSFGVKPILDYSVEEDITQEEAEKREVESSVSSAGDKKEEGSMPQYHVDKSFADRRYKVSSARTYFYLNEATCERNME
# IFIKCLEAVSDDDRKVPRAVATGATFGTGISAIEAVQAGAVHNCW]
#